RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 A0A0G2JS52 829 aa9.52□□□□□ -0.89
LINC00888-204ENST00000487386 SH3D19Q5HYK7 790 aa9.52□□□□□ -0.89
LINC00888-204ENST00000487386 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
LINC00888-204ENST00000487386 LIMD1Q9UGP4 676 aa9.52□□□□□ -0.89
LINC00888-204ENST00000487386 SKIV2LQ15477 1246 aaKnown RBP9.51□□□□□ -0.89
LINC00888-204ENST00000487386 FAM160A2Q8N612 972 aaPredicted RBP9.51□□□□□ -0.89
LINC00888-204ENST00000487386 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
LINC00888-204ENST00000487386 SYMPKQ92797 1274 aaKnown RBP9.5□□□□□ -0.89
LINC00888-204ENST00000487386 GOPCQ9HD26 462 aa9.5□□□□□ -0.89
LINC00888-204ENST00000487386 CLK2P49760 499 aaKnown RBP9.49□□□□□ -0.89
LINC00888-204ENST00000487386 MSS51Q4VC12 460 aa9.49□□□□□ -0.89
LINC00888-204ENST00000487386 PPP1R18Q6NYC8 613 aa9.49□□□□□ -0.89
LINC00888-204ENST00000487386 USB1Q9BQ65 265 aaKnown RBP9.49□□□□□ -0.89
LINC00888-204ENST00000487386 POLR3EQ9NVU0 708 aa9.49□□□□□ -0.89
LINC00888-204ENST00000487386 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
LINC00888-204ENST00000487386 SLC6A16Q9GZN6 736 aa9.48□□□□□ -0.89
LINC00888-204ENST00000487386 S1PR4O95977 384 aa9.47□□□□□ -0.89
LINC00888-204ENST00000487386 RETREG3Q86VR2 466 aa9.47□□□□□ -0.89
LINC00888-204ENST00000487386 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.47□□□□□ -0.89
LINC00888-204ENST00000487386 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
LINC00888-204ENST00000487386 LILRB3O75022 631 aa9.46□□□□□ -0.9
LINC00888-204ENST00000487386 HRCP23327 699 aa9.46□□□□□ -0.9
LINC00888-204ENST00000487386 MTMR2Q13614 643 aa9.46□□□□□ -0.9
LINC00888-204ENST00000487386 PROCA1Q8NCQ7 364 aaPredicted RBP9.46□□□□□ -0.9
LINC00888-204ENST00000487386 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC00888-204ENST00000487386 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
LINC00888-204ENST00000487386 MMP16P51512 607 aa9.45□□□□□ -0.9
LINC00888-204ENST00000487386 QPCTQ16769 361 aa9.45□□□□□ -0.9
LINC00888-204ENST00000487386 ZBTB3Q9H5J0 574 aa9.45□□□□□ -0.9
LINC00888-204ENST00000487386 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
LINC00888-204ENST00000487386 GGCXP38435 758 aa9.44□□□□□ -0.9
LINC00888-204ENST00000487386 CABLES1Q8TDN4 633 aa9.44□□□□□ -0.9
LINC00888-204ENST00000487386 PRDM9Q9NQV7 894 aa9.44□□□□□ -0.9
LINC00888-204ENST00000487386 DXOO77932 396 aaKnown RBP9.43□□□□□ -0.9
LINC00888-204ENST00000487386 CSPP1Q1MSJ5 1256 aa9.43□□□□□ -0.9
LINC00888-204ENST00000487386 FBXO31Q5XUX0 539 aaPredicted RBP9.43□□□□□ -0.9
LINC00888-204ENST00000487386 PPEF1O14829 653 aaPredicted RBP9.41□□□□□ -0.9
LINC00888-204ENST00000487386 JUNDP17535 347 aa9.41□□□□□ -0.9
LINC00888-204ENST00000487386 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
LINC00888-204ENST00000487386 PPP2R2DQ66LE6 453 aa9.41□□□□□ -0.9
LINC00888-204ENST00000487386 DESI1Q6ICB0 168 aa9.41□□□□□ -0.9
LINC00888-204ENST00000487386 ANKLE1Q8NAG6 615 aa9.41□□□□□ -0.9
LINC00888-204ENST00000487386 PRR7Q8TB68 274 aa9.41□□□□□ -0.9
LINC00888-204ENST00000487386 CFAP99D6REC4 459 aa9.4□□□□□ -0.9
LINC00888-204ENST00000487386 PCMTD1Q96MG8 357 aaPredicted RBP9.4□□□□□ -0.9
LINC00888-204ENST00000487386 RGS20O76081 388 aa9.39□□□□□ -0.91
LINC00888-204ENST00000487386 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
LINC00888-204ENST00000487386 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
LINC00888-204ENST00000487386 NUTM2DQ5VT03 806 aaPredicted RBP9.38□□□□□ -0.91
LINC00888-204ENST00000487386 NUTM2AQ8IVF1 878 aaPredicted RBP9.38□□□□□ -0.91
LINC00888-204ENST00000487386 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
LINC00888-204ENST00000487386 PLA2G2CQ5R387 149 aa9.36□□□□□ -0.91
LINC00888-204ENST00000487386 FCF1Q9Y324 198 aaKnown RBP9.36□□□□□ -0.91
LINC00888-204ENST00000487386 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
LINC00888-204ENST00000487386 PTPRNQ16849 979 aa9.34□□□□□ -0.91
LINC00888-204ENST00000487386 LIAT1Q6ZQX7 453 aa9.33□□□□□ -0.92
LINC00888-204ENST00000487386 RFC5P40937 340 aa9.32□□□□□ -0.92
LINC00888-204ENST00000487386 NUDT12Q9BQG2 462 aa9.32□□□□□ -0.92
LINC00888-204ENST00000487386 ATP1B4Q9UN42 357 aaPredicted RBP9.32□□□□□ -0.92
LINC00888-204ENST00000487386 V9GY48 417 aaPredicted RBP9.32□□□□□ -0.92
LINC00888-204ENST00000487386 PER1O15534 1290 aaPredicted RBP9.31□□□□□ -0.92
LINC00888-204ENST00000487386 TMEM132AQ24JP5 1023 aa9.31□□□□□ -0.92
LINC00888-204ENST00000487386 PRKD2Q9BZL6 878 aa9.31□□□□□ -0.92
LINC00888-204ENST00000487386 EVA1BQ9NVM1 165 aa9.31□□□□□ -0.92
LINC00888-204ENST00000487386 CCNYL3P0C7X3 344 aa9.3□□□□□ -0.92
LINC00888-204ENST00000487386 SLC19A1P41440 591 aa9.3□□□□□ -0.92
LINC00888-204ENST00000487386 RPIAP49247 311 aa9.3□□□□□ -0.92
LINC00888-204ENST00000487386 CTDSPL2Q05D32 466 aa9.3□□□□□ -0.92
LINC00888-204ENST00000487386 HELBQ8NG08 1087 aaPredicted RBP9.3□□□□□ -0.92
LINC00888-204ENST00000487386 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
LINC00888-204ENST00000487386 PTCRAQ6ISU1 281 aaPredicted RBP9.29□□□□□ -0.92
LINC00888-204ENST00000487386 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
LINC00888-204ENST00000487386 KCNH2Q12809 1159 aa9.28□□□□□ -0.92
LINC00888-204ENST00000487386 TMEM259Q4ZIN3 620 aa9.28□□□□□ -0.92
LINC00888-204ENST00000487386 TSC1Q92574 1164 aa9.28□□□□□ -0.92
LINC00888-204ENST00000487386 SPRYD7Q5W111 196 aa9.27□□□□□ -0.93
LINC00888-204ENST00000487386 AP1G2O75843 785 aa9.26□□□□□ -0.93
LINC00888-204ENST00000487386 ZBTB24O43167 697 aaPredicted RBP9.24□□□□□ -0.93
LINC00888-204ENST00000487386 ZNF598Q86UK7 904 aaKnown RBP9.24□□□□□ -0.93
LINC00888-204ENST00000487386 BANK1Q8NDB2 785 aa9.24□□□□□ -0.93
LINC00888-204ENST00000487386 LRRN4Q8WUT4 740 aa9.24□□□□□ -0.93
LINC00888-204ENST00000487386 MAP10Q9P2G4 905 aa9.24□□□□□ -0.93
LINC00888-204ENST00000487386 CD2BP2O95400 341 aaKnown RBP9.23□□□□□ -0.93
LINC00888-204ENST00000487386 USP17L8P0C7I0 530 aa9.23□□□□□ -0.93
LINC00888-204ENST00000487386 TRIM32Q13049 653 aa9.23□□□□□ -0.93
LINC00888-204ENST00000487386 UNC93B1Q9H1C4 597 aa9.23□□□□□ -0.93
LINC00888-204ENST00000487386 CTHP32929 405 aa9.21□□□□□ -0.94
LINC00888-204ENST00000487386 ZNF697Q5TEC3 545 aa9.2□□□□□ -0.94
LINC00888-204ENST00000487386 HMX1Q9NP08 348 aaPredicted RBP9.2□□□□□ -0.94
LINC00888-204ENST00000487386 SOCS7O14512 581 aa9.19□□□□□ -0.94
LINC00888-204ENST00000487386 SKOR1P84550 965 aa9.19□□□□□ -0.94
LINC00888-204ENST00000487386 TRIM67Q6ZTA4 783 aa9.19□□□□□ -0.94
LINC00888-204ENST00000487386 WNT7BP56706 349 aa9.18□□□□□ -0.94
LINC00888-204ENST00000487386 NR6A1Q15406 480 aa9.18□□□□□ -0.94
LINC00888-204ENST00000487386 BAP1Q92560 729 aa9.18□□□□□ -0.94
LINC00888-204ENST00000487386 PKD2L1Q9P0L9 805 aa9.18□□□□□ -0.94
LINC00888-204ENST00000487386 GDF9O60383 454 aa9.17□□□□□ -0.94
LINC00888-204ENST00000487386 SH3BP2P78314 561 aa9.17□□□□□ -0.94
LINC00888-204ENST00000487386 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
LINC00888-204ENST00000487386 TRIM34Q9BYJ4 488 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms