RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 PLA2G2CQ5R387 149 aa12.06□□□□□ -0.48
TRA2A-207ENST00000486934 HLA-CQ95604 372 aa12.06□□□□□ -0.48
TRA2A-207ENST00000486934 SLC6A16Q9GZN6 736 aa12.06□□□□□ -0.48
TRA2A-207ENST00000486934 FUT2Q10981 343 aa12.05□□□□□ -0.48
TRA2A-207ENST00000486934 PUS10Q3MIT2 529 aaKnown RBP12.05□□□□□ -0.48
TRA2A-207ENST00000486934 KDM4CQ9H3R0 1056 aa12.05□□□□□ -0.48
TRA2A-207ENST00000486934 AAASQ9NRG9 546 aa12.04□□□□□ -0.48
TRA2A-207ENST00000486934 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
TRA2A-207ENST00000486934 SCUBE3Q8IX30 993 aa12.01□□□□□ -0.49
TRA2A-207ENST00000486934 FAM117AQ9C073 453 aa12.01□□□□□ -0.49
TRA2A-207ENST00000486934 FOXC1Q12948 553 aa12□□□□□ -0.49
TRA2A-207ENST00000486934 TREML4Q6UXN2 200 aa12□□□□□ -0.49
TRA2A-207ENST00000486934 SPIRE2Q8WWL2 714 aa12□□□□□ -0.49
TRA2A-207ENST00000486934 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
TRA2A-207ENST00000486934 GUCA2AQ02747 115 aa11.99□□□□□ -0.49
TRA2A-207ENST00000486934 MORN1Q5T089 497 aa11.99□□□□□ -0.49
TRA2A-207ENST00000486934 PKD2L1Q9P0L9 805 aa11.99□□□□□ -0.49
TRA2A-207ENST00000486934 KDM4AO75164 1064 aa11.98□□□□□ -0.49
TRA2A-207ENST00000486934 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
TRA2A-207ENST00000486934 RSPH4AQ5TD94 716 aa11.97□□□□□ -0.49
TRA2A-207ENST00000486934 SPSB2Q99619 263 aa11.97□□□□□ -0.49
TRA2A-207ENST00000486934 HOXA2O43364 376 aa11.96□□□□□ -0.49
TRA2A-207ENST00000486934 LCE2AQ5TA79 106 aaPredicted RBP11.96□□□□□ -0.49
TRA2A-207ENST00000486934 NDUFV2P19404 249 aa11.95□□□□□ -0.5
TRA2A-207ENST00000486934 TBC1D2Q9BYX2 928 aa11.95□□□□□ -0.5
TRA2A-207ENST00000486934 SLC27A5Q9Y2P5 690 aa11.95□□□□□ -0.5
TRA2A-207ENST00000486934 MOXD2PA6NHM9 499 aa11.94□□□□□ -0.5
TRA2A-207ENST00000486934 ATP6V1AP38606 617 aa11.94□□□□□ -0.5
TRA2A-207ENST00000486934 DACH1Q9UI36 760 aa11.94□□□□□ -0.5
TRA2A-207ENST00000486934 PCDHGC3Q9UN70 934 aa11.93□□□□□ -0.5
TRA2A-207ENST00000486934 THAP11Q96EK4 314 aa11.92□□□□□ -0.5
TRA2A-207ENST00000486934 RNF19BQ6ZMZ0 732 aa11.91□□□□□ -0.5
TRA2A-207ENST00000486934 CRIPAKQ8N1N5 446 aa11.91□□□□□ -0.5
TRA2A-207ENST00000486934 MYSM1Q5VVJ2 828 aa11.9□□□□□ -0.5
TRA2A-207ENST00000486934 NUTM1Q86Y26 1132 aa11.9□□□□□ -0.5
TRA2A-207ENST00000486934 RPIAP49247 311 aa11.89□□□□□ -0.51
TRA2A-207ENST00000486934 TOR4AQ9NXH8 423 aa11.89□□□□□ -0.51
TRA2A-207ENST00000486934 CD2BP2O95400 341 aaKnown RBP11.88□□□□□ -0.51
TRA2A-207ENST00000486934 USP46P62068 366 aa11.88□□□□□ -0.51
TRA2A-207ENST00000486934 FBXO31Q5XUX0 539 aaPredicted RBP11.88□□□□□ -0.51
TRA2A-207ENST00000486934 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
TRA2A-207ENST00000486934 GMPR2Q9P2T1 348 aaKnown RBP11.88□□□□□ -0.51
TRA2A-207ENST00000486934 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
TRA2A-207ENST00000486934 FCF1Q9Y324 198 aaKnown RBP11.88□□□□□ -0.51
TRA2A-207ENST00000486934 AXIN1O15169 862 aa11.87□□□□□ -0.51
TRA2A-207ENST00000486934 AVPP01185 164 aa11.87□□□□□ -0.51
TRA2A-207ENST00000486934 CYP4X1Q8N118 509 aa11.87□□□□□ -0.51
TRA2A-207ENST00000486934 PCDHB15Q9Y5E8 787 aa11.87□□□□□ -0.51
TRA2A-207ENST00000486934 C11orf95C9JLR9 678 aaPredicted RBP11.86□□□□□ -0.51
TRA2A-207ENST00000486934 RSBN1LQ6PCB5 846 aaPredicted RBP11.86□□□□□ -0.51
TRA2A-207ENST00000486934 BRICD5Q6PL45 260 aa11.86□□□□□ -0.51
TRA2A-207ENST00000486934 IL27Q8NEV9 243 aa11.86□□□□□ -0.51
TRA2A-207ENST00000486934 FAM160A2Q8N612 972 aaPredicted RBP11.85□□□□□ -0.51
TRA2A-207ENST00000486934 SPTLC1O15269 473 aa11.84□□□□□ -0.51
TRA2A-207ENST00000486934 WFS1O76024 890 aa11.84□□□□□ -0.51
TRA2A-207ENST00000486934 FDX1P10109 184 aa11.84□□□□□ -0.51
TRA2A-207ENST00000486934 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
TRA2A-207ENST00000486934 PRDM9Q9NQV7 894 aa11.83□□□□□ -0.52
TRA2A-207ENST00000486934 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
TRA2A-207ENST00000486934 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
TRA2A-207ENST00000486934 POLR3EQ9NVU0 708 aa11.82□□□□□ -0.52
TRA2A-207ENST00000486934 PROCA1Q8NCQ7 364 aaPredicted RBP11.81□□□□□ -0.52
TRA2A-207ENST00000486934 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
TRA2A-207ENST00000486934 GRIPAP1Q4V328 841 aa11.8□□□□□ -0.52
TRA2A-207ENST00000486934 SALL2Q9Y467 1007 aaPredicted RBP11.8□□□□□ -0.52
TRA2A-207ENST00000486934 TTC24A2A3L6 582 aaPredicted RBP11.79□□□□□ -0.52
TRA2A-207ENST00000486934 SMCPP49901 116 aaPredicted RBP11.79□□□□□ -0.52
TRA2A-207ENST00000486934 QPCTQ16769 361 aa11.79□□□□□ -0.52
TRA2A-207ENST00000486934 CABLES1Q8TDN4 633 aa11.79□□□□□ -0.52
TRA2A-207ENST00000486934 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
TRA2A-207ENST00000486934 ZBTB24O43167 697 aaPredicted RBP11.77□□□□□ -0.53
TRA2A-207ENST00000486934 GJA5P36382 358 aa11.77□□□□□ -0.53
TRA2A-207ENST00000486934 NFX1Q12986 1120 aaKnown RBP11.77□□□□□ -0.53
TRA2A-207ENST00000486934 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
TRA2A-207ENST00000486934 CLK2P49760 499 aaKnown RBP11.76□□□□□ -0.53
TRA2A-207ENST00000486934 HRCP23327 699 aa11.75□□□□□ -0.53
TRA2A-207ENST00000486934 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
TRA2A-207ENST00000486934 DIXDC1Q155Q3 683 aa11.74□□□□□ -0.53
TRA2A-207ENST00000486934 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
TRA2A-207ENST00000486934 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRA2A-207ENST00000486934 CFAP99D6REC4 459 aa11.73□□□□□ -0.53
TRA2A-207ENST00000486934 C6orf229H3BNL8 230 aa11.73□□□□□ -0.53
TRA2A-207ENST00000486934 LILRB3O75022 631 aa11.73□□□□□ -0.53
TRA2A-207ENST00000486934 Q3C1V9 767 aa11.73□□□□□ -0.53
TRA2A-207ENST00000486934 MSS51Q4VC12 460 aa11.73□□□□□ -0.53
TRA2A-207ENST00000486934 RTL5Q5HYW3 569 aaPredicted RBP11.73□□□□□ -0.53
TRA2A-207ENST00000486934 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
TRA2A-207ENST00000486934 RSPH6AQ9H0K4 717 aa11.72□□□□□ -0.53
TRA2A-207ENST00000486934 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
TRA2A-207ENST00000486934 WIPF1O43516 503 aa11.71□□□□□ -0.53
TRA2A-207ENST00000486934 WNT7AO00755 349 aa11.7□□□□□ -0.54
TRA2A-207ENST00000486934 SMPD1P17405 629 aa11.7□□□□□ -0.54
TRA2A-207ENST00000486934 INSM1Q01101 510 aaPredicted RBP11.7□□□□□ -0.54
TRA2A-207ENST00000486934 MTMR2Q13614 643 aa11.7□□□□□ -0.54
TRA2A-207ENST00000486934 RETREG3Q86VR2 466 aa11.7□□□□□ -0.54
TRA2A-207ENST00000486934 SNIP1Q8TAD8 396 aaKnown RBP11.7□□□□□ -0.54
TRA2A-207ENST00000486934 ATP13A2Q9NQ11 1180 aa11.7□□□□□ -0.54
TRA2A-207ENST00000486934 DXOO77932 396 aaKnown RBP11.69□□□□□ -0.54
TRA2A-207ENST00000486934 SNRPBP14678 240 aaKnown RBP11.69□□□□□ -0.54
TRA2A-207ENST00000486934 MMP16P51512 607 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms