RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 BCL9LQ86UU0 1499 aa9.75□□□□□ -0.85
UBR4-214ENST00000486515 LTKP29376 864 aa9.75□□□□□ -0.85
UBR4-214ENST00000486515 NBPF8Q3BBV2 869 aa9.75□□□□□ -0.85
UBR4-214ENST00000486515 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
UBR4-214ENST00000486515 PROSER2Q86WR7 435 aaPredicted RBP9.75□□□□□ -0.85
UBR4-214ENST00000486515 C14orf93Q9H972 538 aaKnown RBP9.75□□□□□ -0.85
UBR4-214ENST00000486515 UBR1Q8IWV7 1749 aa9.75□□□□□ -0.85
UBR4-214ENST00000486515 PPLO60437 1756 aa9.74□□□□□ -0.85
UBR4-214ENST00000486515 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
UBR4-214ENST00000486515 MSH6P52701 1360 aa9.74□□□□□ -0.85
UBR4-214ENST00000486515 KDM5AP29375 1690 aaKnown RBP9.74□□□□□ -0.85
UBR4-214ENST00000486515 SLIT1O75093 1534 aa9.73□□□□□ -0.85
UBR4-214ENST00000486515 CAPN15O75808 1086 aa9.73□□□□□ -0.85
UBR4-214ENST00000486515 SLC26A8Q96RN1 970 aa9.73□□□□□ -0.85
UBR4-214ENST00000486515 POGKQ9P215 609 aa9.73□□□□□ -0.85
UBR4-214ENST00000486515 STK26Q9P289 416 aa9.73□□□□□ -0.85
UBR4-214ENST00000486515 TBX22Q9Y458 520 aa9.73□□□□□ -0.85
UBR4-214ENST00000486515 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
UBR4-214ENST00000486515 PIK3C2GO75747 1445 aa9.73□□□□□ -0.85
UBR4-214ENST00000486515 NEXMIFQ5QGS0 1516 aa9.72□□□□□ -0.85
UBR4-214ENST00000486515 ARHGAP23Q9P227 1491 aa9.72□□□□□ -0.85
UBR4-214ENST00000486515 NBPF1Q3BBV0 1214 aa9.71□□□□□ -0.86
UBR4-214ENST00000486515 TMEM132EQ6IEE7 984 aa9.71□□□□□ -0.86
UBR4-214ENST00000486515 TRAK1Q9UPV9 953 aa9.71□□□□□ -0.86
UBR4-214ENST00000486515 CDCA8Q53HL2 280 aa9.7□□□□□ -0.86
UBR4-214ENST00000486515 TRPC5Q9UL62 973 aaPredicted RBP9.7□□□□□ -0.86
UBR4-214ENST00000486515 RALGAPBQ86X10 1494 aa9.7□□□□□ -0.86
UBR4-214ENST00000486515 R3HDM1Q15032 1099 aaKnown RBP9.69□□□□□ -0.86
UBR4-214ENST00000486515 C14orf37Q86TY3 774 aa9.69□□□□□ -0.86
UBR4-214ENST00000486515 USP47Q96K76 1375 aa9.69□□□□□ -0.86
UBR4-214ENST00000486515 NRXN1Q9ULB1 1477 aa9.69□□□□□ -0.86
UBR4-214ENST00000486515 PIK3R4Q99570 1358 aa9.68□□□□□ -0.86
UBR4-214ENST00000486515 HSPA5P11021 654 aaKnown RBP9.68□□□□□ -0.86
UBR4-214ENST00000486515 KCNA6P17658 529 aa9.68□□□□□ -0.86
UBR4-214ENST00000486515 USP21Q9UK80 565 aa9.68□□□□□ -0.86
UBR4-214ENST00000486515 AMOTL2Q9Y2J4 779 aa9.68□□□□□ -0.86
UBR4-214ENST00000486515 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
UBR4-214ENST00000486515 CENPJQ9HC77 1338 aaPredicted RBP9.67□□□□□ -0.86
UBR4-214ENST00000486515 ST20-MTHFSA0A0A6YYL1 179 aa9.67□□□□□ -0.86
UBR4-214ENST00000486515 TMF1P82094 1093 aa9.67□□□□□ -0.86
UBR4-214ENST00000486515 LAMC1P11047 1609 aa9.67□□□□□ -0.86
UBR4-214ENST00000486515 TRPM1Q7Z4N2 1603 aa9.67□□□□□ -0.86
UBR4-214ENST00000486515 LRPPRCP42704 1394 aaKnown RBP9.66□□□□□ -0.86
UBR4-214ENST00000486515 ZNF316A6NFI3 1004 aaPredicted RBP9.66□□□□□ -0.86
UBR4-214ENST00000486515 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
UBR4-214ENST00000486515 ADAMTS2O95450 1211 aa9.66□□□□□ -0.86
UBR4-214ENST00000486515 PRAM1Q96QH2 718 aa9.66□□□□□ -0.86
UBR4-214ENST00000486515 POLR3GLQ9BT43 218 aa9.66□□□□□ -0.86
UBR4-214ENST00000486515 AHDC1Q5TGY3 1603 aaPredicted RBP9.66□□□□□ -0.86
UBR4-214ENST00000486515 NRXN3Q9Y4C0 1643 aa9.66□□□□□ -0.86
UBR4-214ENST00000486515 DIP2AQ14689 1571 aa9.66□□□□□ -0.86
UBR4-214ENST00000486515 YTHDC2Q9H6S0 1430 aaKnown RBP9.65□□□□□ -0.86
UBR4-214ENST00000486515 METP08581 1390 aa9.65□□□□□ -0.86
UBR4-214ENST00000486515 SAFB2Q14151 953 aaKnown RBP eCLIP9.65□□□□□ -0.86
UBR4-214ENST00000486515 SIRT1Q96EB6 747 aa9.65□□□□□ -0.86
UBR4-214ENST00000486515 ABCC11Q96J66 1382 aa9.64□□□□□ -0.87
UBR4-214ENST00000486515 HIRIP3Q9BW71 556 aaPredicted RBP9.64□□□□□ -0.87
UBR4-214ENST00000486515 ADAMTS13Q76LX8 1427 aa9.64□□□□□ -0.87
UBR4-214ENST00000486515 EVC2Q86UK5 1308 aa9.63□□□□□ -0.87
UBR4-214ENST00000486515 ASXL1Q8IXJ9 1541 aa9.63□□□□□ -0.87
UBR4-214ENST00000486515 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
UBR4-214ENST00000486515 PPP1R1BQ9UD71 204 aaPredicted RBP9.63□□□□□ -0.87
UBR4-214ENST00000486515 BAG6P46379 1132 aa9.62□□□□□ -0.87
UBR4-214ENST00000486515 PRELPP51888 382 aa9.62□□□□□ -0.87
UBR4-214ENST00000486515 ATRNO75882 1429 aa9.62□□□□□ -0.87
UBR4-214ENST00000486515 KIAA1210Q9ULL0 1709 aa9.62□□□□□ -0.87
UBR4-214ENST00000486515 MINK1Q8N4C8 1332 aaPredicted RBP9.61□□□□□ -0.87
UBR4-214ENST00000486515 WAPLQ7Z5K2 1190 aa9.61□□□□□ -0.87
UBR4-214ENST00000486515 UTRNP46939 3433 aa9.61□□□□□ -0.87
UBR4-214ENST00000486515 NINLQ9Y2I6 1382 aa9.61□□□□□ -0.87
UBR4-214ENST00000486515 LRRC59Q96AG4 307 aaKnown RBP9.6□□□□□ -0.87
UBR4-214ENST00000486515 NKTRP30414 1462 aaKnown RBP9.59□□□□□ -0.87
UBR4-214ENST00000486515 ADGRB1O14514 1584 aa9.59□□□□□ -0.87
UBR4-214ENST00000486515 ATF3P18847 181 aa9.59□□□□□ -0.87
UBR4-214ENST00000486515 FNBP4Q8N3X1 1017 aaPredicted RBP9.59□□□□□ -0.87
UBR4-214ENST00000486515 TECPR2O15040 1411 aa9.58□□□□□ -0.88
UBR4-214ENST00000486515 PTCH1Q13635 1447 aa9.58□□□□□ -0.88
UBR4-214ENST00000486515 BRINP3Q76B58 766 aa9.58□□□□□ -0.88
UBR4-214ENST00000486515 TMC1Q8TDI8 760 aa9.58□□□□□ -0.88
UBR4-214ENST00000486515 SBNO2Q9Y2G9 1366 aa9.58□□□□□ -0.88
UBR4-214ENST00000486515 DLC1Q96QB1 1528 aa9.57□□□□□ -0.88
UBR4-214ENST00000486515 ARHGEF28Q8N1W1 1705 aaKnown RBP9.57□□□□□ -0.88
UBR4-214ENST00000486515 WASLO00401 505 aaPredicted RBP9.57□□□□□ -0.88
UBR4-214ENST00000486515 CADPS2Q86UW7 1296 aa9.57□□□□□ -0.88
UBR4-214ENST00000486515 PUS7Q96PZ0 661 aaKnown RBP9.57□□□□□ -0.88
UBR4-214ENST00000486515 CDK19Q9BWU1 502 aa9.57□□□□□ -0.88
UBR4-214ENST00000486515 C19orf44Q9H6X5 657 aa9.57□□□□□ -0.88
UBR4-214ENST00000486515 PNPLA6Q8IY17 1366 aa9.57□□□□□ -0.88
UBR4-214ENST00000486515 ROBO2Q9HCK4 1378 aa9.57□□□□□ -0.88
UBR4-214ENST00000486515 PTPRUQ92729 1446 aa9.56□□□□□ -0.88
UBR4-214ENST00000486515 GJD4Q96KN9 370 aaPredicted RBP9.56□□□□□ -0.88
UBR4-214ENST00000486515 TESK2Q96S53 571 aa9.56□□□□□ -0.88
UBR4-214ENST00000486515 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
UBR4-214ENST00000486515 EN1Q05925 392 aaPredicted RBP9.55□□□□□ -0.88
UBR4-214ENST00000486515 HDGFL2Q7Z4V5 671 aaPredicted RBP9.55□□□□□ -0.88
UBR4-214ENST00000486515 CABP2Q9NPB3 220 aa9.55□□□□□ -0.88
UBR4-214ENST00000486515 TERF2IPQ9NYB0 399 aa9.55□□□□□ -0.88
UBR4-214ENST00000486515 KNDC1Q76NI1 1749 aa9.54□□□□□ -0.88
UBR4-214ENST00000486515 PLEKHH1Q9ULM0 1364 aa9.54□□□□□ -0.88
UBR4-214ENST00000486515 COL13A1Q5TAT6 717 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 229.9 ms