RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 MARF1Q9Y4F3 1742 aaKnown RBP16.05■□□□□ 0.16
HMGN1-215ENST00000485550 LAMC1P11047 1609 aa16.05■□□□□ 0.16
HMGN1-215ENST00000485550 ZNF326Q5BKZ1 582 aaKnown RBP16.04■□□□□ 0.16
HMGN1-215ENST00000485550 EP400Q96L91 3159 aa16.04■□□□□ 0.16
HMGN1-215ENST00000485550 C1orf167Q5SNV9 1468 aa16.03■□□□□ 0.16
HMGN1-215ENST00000485550 TRPC5Q9UL62 973 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-215ENST00000485550 KIF1BO60333 1816 aa16.01■□□□□ 0.15
HMGN1-215ENST00000485550 ORAI2Q96SN7 254 aa16■□□□□ 0.15
HMGN1-215ENST00000485550 COL22A1Q8NFW1 1626 aaPredicted RBP16■□□□□ 0.15
HMGN1-215ENST00000485550 ATRNO75882 1429 aa16■□□□□ 0.15
HMGN1-215ENST00000485550 NEXMIFQ5QGS0 1516 aa15.99■□□□□ 0.15
HMGN1-215ENST00000485550 SOS2Q07890 1332 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-215ENST00000485550 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
HMGN1-215ENST00000485550 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
HMGN1-215ENST00000485550 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
HMGN1-215ENST00000485550 CLTCL1P53675 1640 aa15.98■□□□□ 0.15
HMGN1-215ENST00000485550 FNBP4Q8N3X1 1017 aaPredicted RBP15.98■□□□□ 0.15
HMGN1-215ENST00000485550 RRBP1Q9P2E9 1410 aaKnown RBP15.96■□□□□ 0.15
HMGN1-215ENST00000485550 BCL9LQ86UU0 1499 aa15.94■□□□□ 0.14
HMGN1-215ENST00000485550 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.94■□□□□ 0.14
HMGN1-215ENST00000485550 MYOM2P54296 1465 aa15.93■□□□□ 0.14
HMGN1-215ENST00000485550 ROBO2Q9HCK4 1378 aa15.93■□□□□ 0.14
HMGN1-215ENST00000485550 CCDC125Q86Z20 511 aa15.93■□□□□ 0.14
HMGN1-215ENST00000485550 NAIPQ13075 1403 aa15.93■□□□□ 0.14
HMGN1-215ENST00000485550 GJD4Q96KN9 370 aaPredicted RBP15.91■□□□□ 0.14
HMGN1-215ENST00000485550 GLI3P10071 1580 aa15.91■□□□□ 0.14
HMGN1-215ENST00000485550 XPCQ01831 940 aaPredicted RBP15.9■□□□□ 0.14
HMGN1-215ENST00000485550 DEFB132Q7Z7B7 95 aa15.89■□□□□ 0.13
HMGN1-215ENST00000485550 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
HMGN1-215ENST00000485550 PXDNQ92626 1479 aa15.89■□□□□ 0.13
HMGN1-215ENST00000485550 PPLO60437 1756 aa15.88■□□□□ 0.13
HMGN1-215ENST00000485550 ESCO1Q5FWF5 840 aa15.88■□□□□ 0.13
HMGN1-215ENST00000485550 NPHP3Q7Z494 1330 aa15.88■□□□□ 0.13
HMGN1-215ENST00000485550 BLMP54132 1417 aaPredicted RBP15.87■□□□□ 0.13
HMGN1-215ENST00000485550 LRP5O75197 1615 aa15.86■□□□□ 0.13
HMGN1-215ENST00000485550 RALGAPBQ86X10 1494 aa15.86■□□□□ 0.13
HMGN1-215ENST00000485550 FOXO3O43524 673 aa15.86■□□□□ 0.13
HMGN1-215ENST00000485550 HFM1A2PYH4 1435 aa15.85■□□□□ 0.13
HMGN1-215ENST00000485550 CDC42BPGQ6DT37 1551 aa15.85■□□□□ 0.13
HMGN1-215ENST00000485550 NUTM2FA1L443 756 aa15.84■□□□□ 0.13
HMGN1-215ENST00000485550 RGPD8O14715 1765 aaPredicted RBP15.84■□□□□ 0.13
HMGN1-215ENST00000485550 VGFO15240 615 aaPredicted RBP15.83■□□□□ 0.12
HMGN1-215ENST00000485550 UNC5CLQ8IV45 518 aa15.83■□□□□ 0.12
HMGN1-215ENST00000485550 PRAG1Q86YV5 1406 aa15.83■□□□□ 0.12
HMGN1-215ENST00000485550 SLIT2O94813 1529 aa15.83■□□□□ 0.12
HMGN1-215ENST00000485550 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
HMGN1-215ENST00000485550 USP32Q8NFA0 1604 aa15.82■□□□□ 0.12
HMGN1-215ENST00000485550 PLCH1Q4KWH8 1693 aa15.82■□□□□ 0.12
HMGN1-215ENST00000485550 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
HMGN1-215ENST00000485550 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
HMGN1-215ENST00000485550 PSDA5PKW4 1024 aaPredicted RBP15.79■□□□□ 0.12
HMGN1-215ENST00000485550 SEPT12Q8IYM1 358 aa15.79■□□□□ 0.12
HMGN1-215ENST00000485550 FMN2Q9NZ56 1722 aa15.79■□□□□ 0.12
HMGN1-215ENST00000485550 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
HMGN1-215ENST00000485550 NWD2Q9ULI1 1742 aa15.78■□□□□ 0.12
HMGN1-215ENST00000485550 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
HMGN1-215ENST00000485550 RGL3Q3MIN7 710 aa15.78■□□□□ 0.12
HMGN1-215ENST00000485550 KIF1AQ12756 1690 aa15.78■□□□□ 0.12
HMGN1-215ENST00000485550 ABCA3Q99758 1704 aa15.77■□□□□ 0.12
HMGN1-215ENST00000485550 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.12
HMGN1-215ENST00000485550 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
HMGN1-215ENST00000485550 WAPLQ7Z5K2 1190 aa15.76■□□□□ 0.11
HMGN1-215ENST00000485550 STK26Q9P289 416 aa15.76■□□□□ 0.11
HMGN1-215ENST00000485550 CCDC9Q9Y3X0 531 aaKnown RBP15.76■□□□□ 0.11
HMGN1-215ENST00000485550 IFT172Q9UG01 1749 aa15.76■□□□□ 0.11
HMGN1-215ENST00000485550 RPGRIP1LQ68CZ1 1315 aa15.75■□□□□ 0.11
HMGN1-215ENST00000485550 KNDC1Q76NI1 1749 aa15.75■□□□□ 0.11
HMGN1-215ENST00000485550 CAPN15O75808 1086 aa15.75■□□□□ 0.11
HMGN1-215ENST00000485550 HAP1P54257 671 aaPredicted RBP15.75■□□□□ 0.11
HMGN1-215ENST00000485550 KRT27Q7Z3Y8 459 aa15.75■□□□□ 0.11
HMGN1-215ENST00000485550 CABLES1Q8TDN4 633 aa15.74■□□□□ 0.11
HMGN1-215ENST00000485550 PLEKHH1Q9ULM0 1364 aa15.74■□□□□ 0.11
HMGN1-215ENST00000485550 HRCP23327 699 aa15.73■□□□□ 0.11
HMGN1-215ENST00000485550 VPS72Q15906 364 aa15.73■□□□□ 0.11
HMGN1-215ENST00000485550 KRT28Q7Z3Y7 464 aa15.73■□□□□ 0.11
HMGN1-215ENST00000485550 RGPD1P0DJD0 1748 aa15.72■□□□□ 0.11
HMGN1-215ENST00000485550 CCDC144AA2RUR9 1427 aa15.72■□□□□ 0.11
HMGN1-215ENST00000485550 A0A0G2JS52 829 aa15.72■□□□□ 0.11
HMGN1-215ENST00000485550 BAG6P46379 1132 aa15.72■□□□□ 0.11
HMGN1-215ENST00000485550 MYT1Q01538 1121 aa15.72■□□□□ 0.11
HMGN1-215ENST00000485550 ADGRF5Q8IZF2 1346 aa15.71■□□□□ 0.11
HMGN1-215ENST00000485550 NRAPQ86VF7 1730 aa15.71■□□□□ 0.1
HMGN1-215ENST00000485550 TNS3Q68CZ2 1445 aa15.7■□□□□ 0.1
HMGN1-215ENST00000485550 TECPR2O15040 1411 aa15.69■□□□□ 0.1
HMGN1-215ENST00000485550 ONECUT3O60422 494 aaPredicted RBP15.69■□□□□ 0.1
HMGN1-215ENST00000485550 TMEM132EQ6IEE7 984 aa15.69■□□□□ 0.1
HMGN1-215ENST00000485550 LMOD2Q6P5Q4 547 aa15.69■□□□□ 0.1
HMGN1-215ENST00000485550 EN1Q05925 392 aaPredicted RBP15.68■□□□□ 0.1
HMGN1-215ENST00000485550 TNS1Q9HBL0 1735 aaKnown RBP15.68■□□□□ 0.1
HMGN1-215ENST00000485550 DSG3P32926 999 aa15.67■□□□□ 0.1
HMGN1-215ENST00000485550 FAM98CQ17RN3 349 aaKnown RBP15.67■□□□□ 0.1
HMGN1-215ENST00000485550 FAM182BQ5T319 152 aa15.67■□□□□ 0.1
HMGN1-215ENST00000485550 PHF8Q9UPP1 1060 aa15.66■□□□□ 0.1
HMGN1-215ENST00000485550 ABCC11Q96J66 1382 aa15.65■□□□□ 0.1
HMGN1-215ENST00000485550 FAM83GA6ND36 823 aa15.65■□□□□ 0.1
HMGN1-215ENST00000485550 PSME1Q06323 249 aa15.65■□□□□ 0.1
HMGN1-215ENST00000485550 R3HDM1Q15032 1099 aaKnown RBP15.65■□□□□ 0.1
HMGN1-215ENST00000485550 SPATA31E1Q6ZUB1 1445 aa15.63■□□□□ 0.09
HMGN1-215ENST00000485550 YTHDC2Q9H6S0 1430 aaKnown RBP15.63■□□□□ 0.09
HMGN1-215ENST00000485550 NRXN1Q9ULB1 1477 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms