RNA–Protein interactions for RNA: ENST00000485499.1

PTPRT-208, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 3

Gene PTPRT, Length 208 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-208ENST00000485499 EPAS1Q99814 870 aa10.45□□□□□ -0.74
PTPRT-208ENST00000485499 SAMD9Q5K651 1589 aa10.43□□□□□ -0.74
PTPRT-208ENST00000485499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.43□□□□□ -0.74
PTPRT-208ENST00000485499 MAGI2Q86UL8 1455 aa10.43□□□□□ -0.74
PTPRT-208ENST00000485499 ZNF142P52746 1687 aaPredicted RBP10.42□□□□□ -0.74
PTPRT-208ENST00000485499 TYW1BQ6NUM6 668 aa10.42□□□□□ -0.74
PTPRT-208ENST00000485499 ZDHHC16Q969W1 377 aa10.42□□□□□ -0.74
PTPRT-208ENST00000485499 PCDHGA10Q9Y5H3 936 aa10.42□□□□□ -0.74
PTPRT-208ENST00000485499 CAMSAP1Q5T5Y3 1602 aa10.42□□□□□ -0.74
PTPRT-208ENST00000485499 C9orf84Q5VXU9 1444 aa10.41□□□□□ -0.74
PTPRT-208ENST00000485499 POLR1AO95602 1720 aaPredicted RBP10.41□□□□□ -0.74
PTPRT-208ENST00000485499 ITGBL1O95965 494 aaPredicted RBP10.41□□□□□ -0.74
PTPRT-208ENST00000485499 CEBPAP49715 358 aaPredicted RBP10.41□□□□□ -0.74
PTPRT-208ENST00000485499 DDX12PQ92771 950 aa10.41□□□□□ -0.74
PTPRT-208ENST00000485499 WNT2BQ93097 391 aa10.41□□□□□ -0.74
PTPRT-208ENST00000485499 BCL2L12Q9HB09 334 aa10.4□□□□□ -0.74
PTPRT-208ENST00000485499 MROH2AA6NES4 1674 aa10.4□□□□□ -0.74
PTPRT-208ENST00000485499 NCOA1Q15788 1441 aa10.4□□□□□ -0.75
PTPRT-208ENST00000485499 ABCA6Q8N139 1617 aa10.4□□□□□ -0.75
PTPRT-208ENST00000485499 MYO3AQ8NEV4 1616 aa10.4□□□□□ -0.75
PTPRT-208ENST00000485499 GOLGA8CPA6NN73 597 aa10.39□□□□□ -0.75
PTPRT-208ENST00000485499 UBAP1LF5GYI3 381 aa10.39□□□□□ -0.75
PTPRT-208ENST00000485499 SEMA3EO15041 775 aa10.39□□□□□ -0.75
PTPRT-208ENST00000485499 SMYD5Q6GMV2 418 aa10.39□□□□□ -0.75
PTPRT-208ENST00000485499 ATP10AO60312 1499 aa10.38□□□□□ -0.75
PTPRT-208ENST00000485499 NUP153P49790 1475 aaKnown RBP10.38□□□□□ -0.75
PTPRT-208ENST00000485499 TESPA1A2RU30 521 aaPredicted RBP10.38□□□□□ -0.75
PTPRT-208ENST00000485499 GRXCR2A6NFK2 248 aa10.38□□□□□ -0.75
PTPRT-208ENST00000485499 NBR1Q14596 966 aa10.38□□□□□ -0.75
PTPRT-208ENST00000485499 LAPTM4AQ15012 233 aa10.38□□□□□ -0.75
PTPRT-208ENST00000485499 DIP2CQ9Y2E4 1556 aa10.38□□□□□ -0.75
PTPRT-208ENST00000485499 SETD1AO15047 1707 aaKnown RBP10.37□□□□□ -0.75
PTPRT-208ENST00000485499 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
PTPRT-208ENST00000485499 MLLT3P42568 568 aaPredicted RBP10.36□□□□□ -0.75
PTPRT-208ENST00000485499 ZBED2Q9BTP6 218 aa10.36□□□□□ -0.75
PTPRT-208ENST00000485499 REREQ9P2R6 1566 aa10.35□□□□□ -0.75
PTPRT-208ENST00000485499 LCE2BO14633 110 aa10.35□□□□□ -0.75
PTPRT-208ENST00000485499 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
PTPRT-208ENST00000485499 ADAM33Q9BZ11 813 aa10.35□□□□□ -0.75
PTPRT-208ENST00000485499 KDM5CP41229 1560 aa10.35□□□□□ -0.75
PTPRT-208ENST00000485499 TULP1O00294 542 aaPredicted RBP10.34□□□□□ -0.75
PTPRT-208ENST00000485499 OSBPP22059 807 aa10.34□□□□□ -0.75
PTPRT-208ENST00000485499 PTPREP23469 700 aa10.34□□□□□ -0.75
PTPRT-208ENST00000485499 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
PTPRT-208ENST00000485499 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
PTPRT-208ENST00000485499 FAM9AQ8IZU1 332 aaPredicted RBP10.33□□□□□ -0.76
PTPRT-208ENST00000485499 SCAPERQ9BY12 1400 aa10.32□□□□□ -0.76
PTPRT-208ENST00000485499 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
PTPRT-208ENST00000485499 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
PTPRT-208ENST00000485499 CDC42BPBQ9Y5S2 1711 aa10.31□□□□□ -0.76
PTPRT-208ENST00000485499 MAP3K7O43318 606 aa10.31□□□□□ -0.76
PTPRT-208ENST00000485499 HSPA1LP34931 641 aa10.31□□□□□ -0.76
PTPRT-208ENST00000485499 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
PTPRT-208ENST00000485499 TRAF7Q6Q0C0 670 aa10.31□□□□□ -0.76
PTPRT-208ENST00000485499 KIF14Q15058 1648 aa10.3□□□□□ -0.76
PTPRT-208ENST00000485499 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
PTPRT-208ENST00000485499 AGLP35573 1532 aa10.29□□□□□ -0.76
PTPRT-208ENST00000485499 RBM33Q96EV2 1170 aaKnown RBP10.29□□□□□ -0.76
PTPRT-208ENST00000485499 NBPF3Q9H094 633 aa10.29□□□□□ -0.76
PTPRT-208ENST00000485499 TRAPPC8Q9Y2L5 1435 aa10.29□□□□□ -0.76
PTPRT-208ENST00000485499 KIDINS220Q9ULH0 1771 aa10.29□□□□□ -0.76
PTPRT-208ENST00000485499 PPP1R3GB7ZBB8 358 aa10.28□□□□□ -0.76
PTPRT-208ENST00000485499 PIP4K2BP78356 416 aa10.28□□□□□ -0.76
PTPRT-208ENST00000485499 BCANQ96GW7 911 aa10.28□□□□□ -0.76
PTPRT-208ENST00000485499 CDK13Q14004 1512 aaKnown RBP10.28□□□□□ -0.76
PTPRT-208ENST00000485499 PRIM1P49642 420 aaKnown RBP10.27□□□□□ -0.77
PTPRT-208ENST00000485499 PRXQ9BXM0 1461 aa10.27□□□□□ -0.77
PTPRT-208ENST00000485499 ALKQ9UM73 1620 aa10.26□□□□□ -0.77
PTPRT-208ENST00000485499 PLA2R1Q13018 1463 aa10.26□□□□□ -0.77
PTPRT-208ENST00000485499 LRRIQ1Q96JM4 1722 aa10.26□□□□□ -0.77
PTPRT-208ENST00000485499 CPS1P31327 1500 aa10.26□□□□□ -0.77
PTPRT-208ENST00000485499 STRCP1A6NGW2 1772 aa10.25□□□□□ -0.77
PTPRT-208ENST00000485499 ARHGAP5Q13017 1502 aa10.25□□□□□ -0.77
PTPRT-208ENST00000485499 NYAP1Q6ZVC0 841 aa10.25□□□□□ -0.77
PTPRT-208ENST00000485499 PREX2Q70Z35 1606 aa10.25□□□□□ -0.77
PTPRT-208ENST00000485499 RNF17Q9BXT8 1623 aaKnown RBP10.25□□□□□ -0.77
PTPRT-208ENST00000485499 PLCH2O75038 1416 aa10.24□□□□□ -0.77
PTPRT-208ENST00000485499 TCOF1Q13428 1488 aaKnown RBP10.24□□□□□ -0.77
PTPRT-208ENST00000485499 NEURL4Q96JN8 1562 aa10.24□□□□□ -0.77
PTPRT-208ENST00000485499 PLEKHD1A6NEE1 506 aa10.24□□□□□ -0.77
PTPRT-208ENST00000485499 TSR1Q2NL82 804 aaKnown RBP10.24□□□□□ -0.77
PTPRT-208ENST00000485499 NPATQ14207 1427 aa10.24□□□□□ -0.77
PTPRT-208ENST00000485499 CNTLNQ9NXG0 1405 aa10.24□□□□□ -0.77
PTPRT-208ENST00000485499 ESF1Q9H501 851 aaKnown RBP10.23□□□□□ -0.77
PTPRT-208ENST00000485499 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
PTPRT-208ENST00000485499 CDC42BPAQ5VT25 1732 aa10.22□□□□□ -0.77
PTPRT-208ENST00000485499 GFRA3O60609 400 aa10.22□□□□□ -0.77
PTPRT-208ENST00000485499 ANKK1Q8NFD2 765 aa10.22□□□□□ -0.77
PTPRT-208ENST00000485499 XIRP1Q702N8 1843 aaKnown RBP10.21□□□□□ -0.77
PTPRT-208ENST00000485499 ONECUT3O60422 494 aaPredicted RBP10.21□□□□□ -0.77
PTPRT-208ENST00000485499 COL9A1P20849 921 aa10.21□□□□□ -0.77
PTPRT-208ENST00000485499 KCNC4Q03721 635 aa10.21□□□□□ -0.77
PTPRT-208ENST00000485499 RBM26Q5T8P6 1007 aaKnown RBP10.21□□□□□ -0.77
PTPRT-208ENST00000485499 ABCC1P33527 1531 aa10.21□□□□□ -0.78
PTPRT-208ENST00000485499 SYNMO15061 1565 aa10.21□□□□□ -0.78
PTPRT-208ENST00000485499 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
PTPRT-208ENST00000485499 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTPRT-208ENST00000485499 RBM27Q9P2N5 1060 aaKnown RBP10.2□□□□□ -0.78
PTPRT-208ENST00000485499 IQGAP1P46940 1657 aa10.19□□□□□ -0.78
PTPRT-208ENST00000485499 VWDEQ8N2E2 1590 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms