RNA–Protein interactions for RNA: ENST00000484821.1

POLR2B-209, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-209ENST00000484821 KDM4AO75164 1064 aa12.86□□□□□ -0.35
POLR2B-209ENST00000484821 MDM2Q00987 491 aaPredicted RBP12.86□□□□□ -0.35
POLR2B-209ENST00000484821 ZBTB24O43167 697 aaPredicted RBP12.84□□□□□ -0.35
POLR2B-209ENST00000484821 MMP16P51512 607 aa12.84□□□□□ -0.35
POLR2B-209ENST00000484821 CYP4X1Q8N118 509 aa12.82□□□□□ -0.36
POLR2B-209ENST00000484821 CRIPAKQ8N1N5 446 aa12.82□□□□□ -0.36
POLR2B-209ENST00000484821 USB1Q9BQ65 265 aaKnown RBP12.82□□□□□ -0.36
POLR2B-209ENST00000484821 AVPP01185 164 aa12.81□□□□□ -0.36
POLR2B-209ENST00000484821 HLA-CQ95604 372 aa12.81□□□□□ -0.36
POLR2B-209ENST00000484821 CCDC102AQ96A19 550 aa12.81□□□□□ -0.36
POLR2B-209ENST00000484821 USP46P62068 366 aa12.8□□□□□ -0.36
POLR2B-209ENST00000484821 DXOO77932 396 aaKnown RBP12.79□□□□□ -0.36
POLR2B-209ENST00000484821 TRIM32Q13049 653 aa12.78□□□□□ -0.36
POLR2B-209ENST00000484821 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
POLR2B-209ENST00000484821 HOXA2O43364 376 aa12.77□□□□□ -0.37
POLR2B-209ENST00000484821 WNT7AO00755 349 aa12.76□□□□□ -0.37
POLR2B-209ENST00000484821 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
POLR2B-209ENST00000484821 FAM217BQ9NTX9 383 aaPredicted RBP12.76□□□□□ -0.37
POLR2B-209ENST00000484821 TTC24A2A3L6 582 aaPredicted RBP12.74□□□□□ -0.37
POLR2B-209ENST00000484821 AXIN1O15169 862 aa12.74□□□□□ -0.37
POLR2B-209ENST00000484821 CLCN1P35523 988 aa12.74□□□□□ -0.37
POLR2B-209ENST00000484821 CTC1Q2NKJ3 1217 aa12.74□□□□□ -0.37
POLR2B-209ENST00000484821 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
POLR2B-209ENST00000484821 GUCA2AQ02747 115 aa12.73□□□□□ -0.37
POLR2B-209ENST00000484821 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.37
POLR2B-209ENST00000484821 SNIP1Q8TAD8 396 aaKnown RBP12.73□□□□□ -0.37
POLR2B-209ENST00000484821 SMPD1P17405 629 aa12.71□□□□□ -0.37
POLR2B-209ENST00000484821 MRGPRX2Q96LB1 330 aa12.71□□□□□ -0.37
POLR2B-209ENST00000484821 CCDC24Q8N4L8 307 aa12.7□□□□□ -0.38
POLR2B-209ENST00000484821 SYMPKQ92797 1274 aaKnown RBP12.7□□□□□ -0.38
POLR2B-209ENST00000484821 REPIN1Q9BWE0 567 aaKnown RBP12.69□□□□□ -0.38
POLR2B-209ENST00000484821 GMPR2Q9P2T1 348 aaKnown RBP12.69□□□□□ -0.38
POLR2B-209ENST00000484821 J3QL48 77 aa12.67□□□□□ -0.38
POLR2B-209ENST00000484821 JUNDP17535 347 aa12.67□□□□□ -0.38
POLR2B-209ENST00000484821 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
POLR2B-209ENST00000484821 KRI1Q8N9T8 703 aaKnown RBP12.67□□□□□ -0.38
POLR2B-209ENST00000484821 SKOR1P84550 965 aa12.66□□□□□ -0.38
POLR2B-209ENST00000484821 LCE2AQ5TA79 106 aaPredicted RBP12.66□□□□□ -0.38
POLR2B-209ENST00000484821 TREML4Q6UXN2 200 aa12.65□□□□□ -0.38
POLR2B-209ENST00000484821 RC3H1Q5TC82 1133 aaKnown RBP12.64□□□□□ -0.39
POLR2B-209ENST00000484821 C11orf95C9JLR9 678 aaPredicted RBP12.63□□□□□ -0.39
POLR2B-209ENST00000484821 WNT7BP56706 349 aa12.63□□□□□ -0.39
POLR2B-209ENST00000484821 RETREG3Q86VR2 466 aa12.63□□□□□ -0.39
POLR2B-209ENST00000484821 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
POLR2B-209ENST00000484821 FDX1P10109 184 aa12.61□□□□□ -0.39
POLR2B-209ENST00000484821 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
POLR2B-209ENST00000484821 PTCRAQ6ISU1 281 aaPredicted RBP12.6□□□□□ -0.39
POLR2B-209ENST00000484821 HPS1Q92902 700 aa12.6□□□□□ -0.39
POLR2B-209ENST00000484821 BARGINQ6ZT62 677 aa12.59□□□□□ -0.39
POLR2B-209ENST00000484821 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
POLR2B-209ENST00000484821 NUDT12Q9BQG2 462 aa12.59□□□□□ -0.39
POLR2B-209ENST00000484821 ATP13A2Q9NQ11 1180 aa12.59□□□□□ -0.39
POLR2B-209ENST00000484821 ZMYND10O75800 440 aa12.58□□□□□ -0.4
POLR2B-209ENST00000484821 C6orf229H3BNL8 230 aa12.57□□□□□ -0.4
POLR2B-209ENST00000484821 NDUFV2P19404 249 aa12.55□□□□□ -0.4
POLR2B-209ENST00000484821 AMHR2Q16671 573 aa12.54□□□□□ -0.4
POLR2B-209ENST00000484821 MOXD2PA6NHM9 499 aa12.53□□□□□ -0.4
POLR2B-209ENST00000484821 SIAH2O43255 324 aa12.53□□□□□ -0.4
POLR2B-209ENST00000484821 MS4A1P11836 297 aa12.53□□□□□ -0.4
POLR2B-209ENST00000484821 TTLL12Q14166 644 aaPredicted RBP12.53□□□□□ -0.4
POLR2B-209ENST00000484821 ALDH1A1P00352 501 aa12.52□□□□□ -0.41
POLR2B-209ENST00000484821 SNRPBP14678 240 aaKnown RBP12.52□□□□□ -0.41
POLR2B-209ENST00000484821 ZC3H15Q8WU90 426 aaKnown RBP12.52□□□□□ -0.41
POLR2B-209ENST00000484821 WFS1O76024 890 aa12.51□□□□□ -0.41
POLR2B-209ENST00000484821 CCNYL3P0C7X3 344 aa12.51□□□□□ -0.41
POLR2B-209ENST00000484821 NFX1Q12986 1120 aaKnown RBP12.51□□□□□ -0.41
POLR2B-209ENST00000484821 GIGYF2Q6Y7W6 1299 aaKnown RBP12.51□□□□□ -0.41
POLR2B-209ENST00000484821 TRIM47Q96LD4 638 aa12.51□□□□□ -0.41
POLR2B-209ENST00000484821 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
POLR2B-209ENST00000484821 EVA1BQ9NVM1 165 aa12.5□□□□□ -0.41
POLR2B-209ENST00000484821 SH3BP2P78314 561 aa12.49□□□□□ -0.41
POLR2B-209ENST00000484821 PTPRNQ16849 979 aa12.49□□□□□ -0.41
POLR2B-209ENST00000484821 EHBP1Q8NDI1 1231 aa12.49□□□□□ -0.41
POLR2B-209ENST00000484821 PRR7Q8TB68 274 aa12.47□□□□□ -0.41
POLR2B-209ENST00000484821 BEGAINQ9BUH8 593 aa12.47□□□□□ -0.41
POLR2B-209ENST00000484821 MTMR2Q13614 643 aa12.46□□□□□ -0.41
POLR2B-209ENST00000484821 UNC93B1Q9H1C4 597 aa12.46□□□□□ -0.41
POLR2B-209ENST00000484821 SPDYE5A6NIY4 337 aa12.45□□□□□ -0.42
POLR2B-209ENST00000484821 DESI1Q6ICB0 168 aa12.45□□□□□ -0.42
POLR2B-209ENST00000484821 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
POLR2B-209ENST00000484821 KIFC2Q96AC6 838 aa12.44□□□□□ -0.42
POLR2B-209ENST00000484821 GJA5P36382 358 aa12.43□□□□□ -0.42
POLR2B-209ENST00000484821 BAP1Q92560 729 aa12.43□□□□□ -0.42
POLR2B-209ENST00000484821 TBC1D2Q9BYX2 928 aa12.42□□□□□ -0.42
POLR2B-209ENST00000484821 WASF2Q9Y6W5 498 aa12.42□□□□□ -0.42
POLR2B-209ENST00000484821 TERTO14746 1132 aaKnown RBP12.41□□□□□ -0.42
POLR2B-209ENST00000484821 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
POLR2B-209ENST00000484821 LCE2CQ5TA81 110 aa12.41□□□□□ -0.42
POLR2B-209ENST00000484821 PARP9Q8IXQ6 854 aa12.41□□□□□ -0.42
POLR2B-209ENST00000484821 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
POLR2B-209ENST00000484821 TRIM66O15016 1216 aa12.39□□□□□ -0.43
POLR2B-209ENST00000484821 WIPF1O43516 503 aa12.39□□□□□ -0.43
POLR2B-209ENST00000484821 ZNF511Q8NB15 262 aa12.39□□□□□ -0.43
POLR2B-209ENST00000484821 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
POLR2B-209ENST00000484821 CAPN5O15484 640 aaPredicted RBP12.38□□□□□ -0.43
POLR2B-209ENST00000484821 DIXDC1Q155Q3 683 aa12.38□□□□□ -0.43
POLR2B-209ENST00000484821 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
POLR2B-209ENST00000484821 LYPD8Q6UX82 237 aa12.37□□□□□ -0.43
POLR2B-209ENST00000484821 SPTLC1O15269 473 aa12.36□□□□□ -0.43
POLR2B-209ENST00000484821 BMP1P13497 986 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms