RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 TULP4Q9NRJ4 1543 aa9.15□□□□□ -0.95
NCL-209ENST00000484328 DCCP43146 1447 aa9.14□□□□□ -0.95
NCL-209ENST00000484328 PLEKHH1Q9ULM0 1364 aa9.14□□□□□ -0.95
NCL-209ENST00000484328 USP32Q8NFA0 1604 aa9.14□□□□□ -0.95
NCL-209ENST00000484328 CACNB1Q02641 598 aaPredicted RBP9.14□□□□□ -0.95
NCL-209ENST00000484328 CARD11Q9BXL7 1154 aa9.14□□□□□ -0.95
NCL-209ENST00000484328 TMEM94Q12767 1356 aa9.12□□□□□ -0.95
NCL-209ENST00000484328 ITSN1Q15811 1721 aa9.12□□□□□ -0.95
NCL-209ENST00000484328 MYOM1P52179 1685 aa9.12□□□□□ -0.95
NCL-209ENST00000484328 CENPJQ9HC77 1338 aaPredicted RBP9.11□□□□□ -0.95
NCL-209ENST00000484328 STK26Q9P289 416 aa9.11□□□□□ -0.95
NCL-209ENST00000484328 TRAK1Q9UPV9 953 aa9.11□□□□□ -0.95
NCL-209ENST00000484328 PRAM1Q96QH2 718 aa9.1□□□□□ -0.95
NCL-209ENST00000484328 ATP7BP35670 1465 aa9.09□□□□□ -0.95
NCL-209ENST00000484328 ANKARQ7Z5J8 1434 aa9.09□□□□□ -0.95
NCL-209ENST00000484328 WAPLQ7Z5K2 1190 aa9.09□□□□□ -0.95
NCL-209ENST00000484328 TESK2Q96S53 571 aa9.09□□□□□ -0.95
NCL-209ENST00000484328 KIF1AQ12756 1690 aa9.09□□□□□ -0.95
NCL-209ENST00000484328 RGPD8O14715 1765 aaPredicted RBP9.09□□□□□ -0.95
NCL-209ENST00000484328 EIF4G2P78344 907 aaKnown RBP eCLIP9.08□□□□□ -0.967e-33■□□□□ 8.3
NCL-209ENST00000484328 MST1RQ04912 1400 aa9.07□□□□□ -0.96
NCL-209ENST00000484328 ST20-MTHFSA0A0A6YYL1 179 aa9.07□□□□□ -0.96
NCL-209ENST00000484328 HSPA5P11021 654 aaKnown RBP9.07□□□□□ -0.96
NCL-209ENST00000484328 PROSER2Q86WR7 435 aaPredicted RBP9.07□□□□□ -0.96
NCL-209ENST00000484328 POGKQ9P215 609 aa9.07□□□□□ -0.96
NCL-209ENST00000484328 MSH6P52701 1360 aa9.07□□□□□ -0.96
NCL-209ENST00000484328 DISP3Q9P2K9 1392 aa9.07□□□□□ -0.96
NCL-209ENST00000484328 NHSL1Q5SYE7 1610 aa9.06□□□□□ -0.96
NCL-209ENST00000484328 AKAP12Q02952 1782 aa9.06□□□□□ -0.96
NCL-209ENST00000484328 MINK1Q8N4C8 1332 aaPredicted RBP9.05□□□□□ -0.96
NCL-209ENST00000484328 MON2Q7Z3U7 1717 aa9.05□□□□□ -0.96
NCL-209ENST00000484328 NRKQ7Z2Y5 1582 aa9.05□□□□□ -0.96
NCL-209ENST00000484328 C19orf44Q9H6X5 657 aa9.05□□□□□ -0.96
NCL-209ENST00000484328 ROBO1Q9Y6N7 1651 aa9.04□□□□□ -0.96
NCL-209ENST00000484328 WASLO00401 505 aaPredicted RBP9.04□□□□□ -0.96
NCL-209ENST00000484328 SLC24A1O60721 1099 aa9.04□□□□□ -0.96
NCL-209ENST00000484328 SAFB2Q14151 953 aaKnown RBP eCLIP9.04□□□□□ -0.96
NCL-209ENST00000484328 RBM33Q96EV2 1170 aaKnown RBP9.04□□□□□ -0.96
NCL-209ENST00000484328 EVC2Q86UK5 1308 aa9.04□□□□□ -0.96
NCL-209ENST00000484328 C1orf167Q5SNV9 1468 aa9.03□□□□□ -0.96
NCL-209ENST00000484328 PUS7Q96PZ0 661 aaKnown RBP9.03□□□□□ -0.96
NCL-209ENST00000484328 PRR36Q9H6K5 1346 aa9.03□□□□□ -0.96
NCL-209ENST00000484328 TRPM3Q9HCF6 1732 aaPredicted RBP9.02□□□□□ -0.96
NCL-209ENST00000484328 AHDC1Q5TGY3 1603 aaPredicted RBP9.02□□□□□ -0.96
NCL-209ENST00000484328 ATAD2Q6PL18 1390 aa9.02□□□□□ -0.97
NCL-209ENST00000484328 NINLQ9Y2I6 1382 aa9.02□□□□□ -0.97
NCL-209ENST00000484328 CADPS2Q86UW7 1296 aa9.02□□□□□ -0.97
NCL-209ENST00000484328 CERKQ8TCT0 537 aa9.02□□□□□ -0.97
NCL-209ENST00000484328 HIRIP3Q9BW71 556 aaPredicted RBP9.02□□□□□ -0.97
NCL-209ENST00000484328 CD163L1Q9NR16 1453 aa9.02□□□□□ -0.97
NCL-209ENST00000484328 USP54Q70EL1 1684 aa9.01□□□□□ -0.97
NCL-209ENST00000484328 TMF1P82094 1093 aa9.01□□□□□ -0.97
NCL-209ENST00000484328 POLR3AO14802 1390 aaPredicted RBP9□□□□□ -0.97
NCL-209ENST00000484328 CCDC7Q96M83 1385 aa9□□□□□ -0.97
NCL-209ENST00000484328 PPIP5K1Q6PFW1 1433 aa9□□□□□ -0.97
NCL-209ENST00000484328 C11orf95C9JLR9 678 aaPredicted RBP9□□□□□ -0.97
NCL-209ENST00000484328 C14orf37Q86TY3 774 aa9□□□□□ -0.97
NCL-209ENST00000484328 CDK19Q9BWU1 502 aa9□□□□□ -0.97
NCL-209ENST00000484328 KIF7Q2M1P5 1343 aa9□□□□□ -0.97
NCL-209ENST00000484328 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
NCL-209ENST00000484328 CPSF1Q10570 1443 aaKnown RBP8.99□□□□□ -0.97
NCL-209ENST00000484328 COL16A1Q07092 1604 aaPredicted RBP8.99□□□□□ -0.97
NCL-209ENST00000484328 ATF3P18847 181 aa8.99□□□□□ -0.97
NCL-209ENST00000484328 CDCA8Q53HL2 280 aa8.99□□□□□ -0.97
NCL-209ENST00000484328 PXDNQ92626 1479 aa8.99□□□□□ -0.97
NCL-209ENST00000484328 ALS2Q96Q42 1657 aa8.99□□□□□ -0.97
NCL-209ENST00000484328 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
NCL-209ENST00000484328 ANKRD26Q9UPS8 1709 aa8.98□□□□□ -0.97
NCL-209ENST00000484328 MARF1Q9Y4F3 1742 aaKnown RBP8.98□□□□□ -0.97
NCL-209ENST00000484328 SRPK2P78362 688 aaKnown RBP8.98□□□□□ -0.97
NCL-209ENST00000484328 NUDT16Q96DE0 195 aaKnown RBP8.98□□□□□ -0.97
NCL-209ENST00000484328 CABP2Q9NPB3 220 aa8.98□□□□□ -0.97
NCL-209ENST00000484328 KIF20BQ96Q89 1820 aa8.98□□□□□ -0.97
NCL-209ENST00000484328 PIK3C2AO00443 1686 aa8.97□□□□□ -0.97
NCL-209ENST00000484328 PHLPP1O60346 1717 aa8.97□□□□□ -0.97
NCL-209ENST00000484328 ABCA3Q99758 1704 aa8.97□□□□□ -0.97
NCL-209ENST00000484328 SLAIN2Q9P270 581 aa8.97□□□□□ -0.97
NCL-209ENST00000484328 CCDC61Q9Y6R9 512 aa8.97□□□□□ -0.97
NCL-209ENST00000484328 ANKRD36BQ8N2N9 1353 aa8.97□□□□□ -0.97
NCL-209ENST00000484328 USP6P35125 1406 aa8.97□□□□□ -0.97
NCL-209ENST00000484328 SSH2Q76I76 1423 aa8.97□□□□□ -0.97
NCL-209ENST00000484328 MED1Q15648 1581 aaPredicted RBP8.96□□□□□ -0.97
NCL-209ENST00000484328 COL22A1Q8NFW1 1626 aaPredicted RBP8.96□□□□□ -0.98
NCL-209ENST00000484328 PLEKHG3A1L390 1219 aa8.96□□□□□ -0.98
NCL-209ENST00000484328 BRINP3Q76B58 766 aa8.96□□□□□ -0.98
NCL-209ENST00000484328 A0A1W2PP64 1363 aa8.96□□□□□ -0.98
NCL-209ENST00000484328 SHPRHQ149N8 1683 aa8.95□□□□□ -0.98
NCL-209ENST00000484328 TOM1O60784 492 aa8.95□□□□□ -0.98
NCL-209ENST00000484328 ORAI2Q96SN7 254 aa8.95□□□□□ -0.98
NCL-209ENST00000484328 BRD4O60885 1362 aaPredicted RBP8.95□□□□□ -0.98
NCL-209ENST00000484328 NUTM2FA1L443 756 aa8.94□□□□□ -0.98
NCL-209ENST00000484328 UBAP1LF5GYI3 381 aa8.94□□□□□ -0.98
NCL-209ENST00000484328 PHF8Q9UPP1 1060 aa8.94□□□□□ -0.98
NCL-209ENST00000484328 EDC4Q6P2E9 1401 aaKnown RBP8.94□□□□□ -0.98
NCL-209ENST00000484328 PHRF1Q9P1Y6 1649 aaKnown RBP8.94□□□□□ -0.98
NCL-209ENST00000484328 ZNF316A6NFI3 1004 aaPredicted RBP8.93□□□□□ -0.98
NCL-209ENST00000484328 ESCO1Q5FWF5 840 aa8.93□□□□□ -0.98
NCL-209ENST00000484328 CABP1Q9NZU7 370 aa8.93□□□□□ -0.98
NCL-209ENST00000484328 ACEP12821 1306 aa8.93□□□□□ -0.98
NCL-209ENST00000484328 SOS2Q07890 1332 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms