RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 IDI1Q13907 227 aa19.73■□□□□ 0.75
DDR1-244ENST00000482873 PIK3C2GO75747 1445 aa19.73■□□□□ 0.75
DDR1-244ENST00000482873 POGZQ7Z3K3 1410 aa19.73■□□□□ 0.75
DDR1-244ENST00000482873 RGS3P49796 1198 aa19.72■□□□□ 0.75
DDR1-244ENST00000482873 MYOM2P54296 1465 aa19.72■□□□□ 0.75
DDR1-244ENST00000482873 MTHFSP49914 203 aa19.71■□□□□ 0.75
DDR1-244ENST00000482873 FRMPD1Q5SYB0 1578 aa19.7■□□□□ 0.74
DDR1-244ENST00000482873 FRAT2O75474 233 aaPredicted RBP19.7■□□□□ 0.74
DDR1-244ENST00000482873 BCL2L13Q9BXK5 485 aa19.7■□□□□ 0.74
DDR1-244ENST00000482873 FBXO31Q5XUX0 539 aaPredicted RBP19.69■□□□□ 0.74
DDR1-244ENST00000482873 WWC1Q8IX03 1113 aa19.68■□□□□ 0.74
DDR1-244ENST00000482873 SRPK2P78362 688 aaKnown RBP19.67■□□□□ 0.74
DDR1-244ENST00000482873 NPC1L1Q9UHC9 1359 aa19.67■□□□□ 0.74
DDR1-244ENST00000482873 CANXP27824 592 aaKnown RBP19.67■□□□□ 0.74
DDR1-244ENST00000482873 PANK1Q8TE04 598 aa19.67■□□□□ 0.74
DDR1-244ENST00000482873 MINK1Q8N4C8 1332 aaPredicted RBP19.66■□□□□ 0.74
DDR1-244ENST00000482873 TCP11L2Q8N4U5 519 aa19.66■□□□□ 0.74
DDR1-244ENST00000482873 ADGRB3O60242 1522 aa19.65■□□□□ 0.74
DDR1-244ENST00000482873 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.65■□□□□ 0.74
DDR1-244ENST00000482873 YEATS2Q9ULM3 1422 aa19.65■□□□□ 0.74
DDR1-244ENST00000482873 E9PSI1 815 aa19.65■□□□□ 0.74
DDR1-244ENST00000482873 GGNBP2Q9H3C7 697 aa19.65■□□□□ 0.74
DDR1-244ENST00000482873 TNNQ9UQP3 1299 aa19.65■□□□□ 0.74
DDR1-244ENST00000482873 VGFO15240 615 aaPredicted RBP19.64■□□□□ 0.73
DDR1-244ENST00000482873 TRMT2AQ8IZ69 625 aaKnown RBP19.64■□□□□ 0.73
DDR1-244ENST00000482873 COG6Q9Y2V7 657 aa19.64■□□□□ 0.73
DDR1-244ENST00000482873 MLECQ14165 292 aa19.64■□□□□ 0.73
DDR1-244ENST00000482873 NRXN1Q9ULB1 1477 aa19.63■□□□□ 0.73
DDR1-244ENST00000482873 MLH3Q9UHC1 1453 aa19.63■□□□□ 0.73
DDR1-244ENST00000482873 U2AF1L5P0DN76 240 aaPredicted RBP19.63■□□□□ 0.73
DDR1-244ENST00000482873 U2AF1Q01081 240 aaKnown RBP eCLIP19.63■□□□□ 0.73
DDR1-244ENST00000482873 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
DDR1-244ENST00000482873 ABCC3O15438 1527 aa19.61■□□□□ 0.73
DDR1-244ENST00000482873 FBLN1P23142 703 aa19.61■□□□□ 0.73
DDR1-244ENST00000482873 FAM69CQ0P6D2 419 aa19.61■□□□□ 0.73
DDR1-244ENST00000482873 CLUAP1Q96AJ1 413 aa19.61■□□□□ 0.73
DDR1-244ENST00000482873 CGNL1Q0VF96 1302 aa19.61■□□□□ 0.73
DDR1-244ENST00000482873 U2SURPO15042 1029 aaKnown RBP19.61■□□□□ 0.73
DDR1-244ENST00000482873 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
DDR1-244ENST00000482873 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
DDR1-244ENST00000482873 LMTK2Q8IWU2 1503 aa19.61■□□□□ 0.73
DDR1-244ENST00000482873 HECW2Q9P2P5 1572 aa19.6■□□□□ 0.73
DDR1-244ENST00000482873 IFT172Q9UG01 1749 aa19.6■□□□□ 0.73
DDR1-244ENST00000482873 IGHDP01880 384 aa19.6■□□□□ 0.73
DDR1-244ENST00000482873 STAG3Q9UJ98 1225 aa19.6■□□□□ 0.73
DDR1-244ENST00000482873 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
DDR1-244ENST00000482873 ADGRB1O14514 1584 aa19.59■□□□□ 0.73
DDR1-244ENST00000482873 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
DDR1-244ENST00000482873 POGKQ9P215 609 aa19.59■□□□□ 0.73
DDR1-244ENST00000482873 POLR3AO14802 1390 aaPredicted RBP19.58■□□□□ 0.72
DDR1-244ENST00000482873 SBNO2Q9Y2G9 1366 aa19.58■□□□□ 0.72
DDR1-244ENST00000482873 SIGLEC1Q9BZZ2 1709 aa19.57■□□□□ 0.72
DDR1-244ENST00000482873 RPGRIP1LQ68CZ1 1315 aa19.57■□□□□ 0.72
DDR1-244ENST00000482873 QRICH2Q9H0J4 1663 aa19.56■□□□□ 0.72
DDR1-244ENST00000482873 USP19O94966 1318 aa19.56■□□□□ 0.72
DDR1-244ENST00000482873 TSR2Q969E8 191 aaKnown RBP19.55■□□□□ 0.72
DDR1-244ENST00000482873 CFAP53Q96M91 514 aa19.55■□□□□ 0.72
DDR1-244ENST00000482873 PPLO60437 1756 aa19.55■□□□□ 0.72
DDR1-244ENST00000482873 NEURL4Q96JN8 1562 aa19.54■□□□□ 0.72
DDR1-244ENST00000482873 RIMBP3CA6NJZ7 1639 aa19.53■□□□□ 0.72
DDR1-244ENST00000482873 RIMBP3BA6NNM3 1639 aa19.53■□□□□ 0.72
DDR1-244ENST00000482873 RIMBP3Q9UFD9 1639 aa19.53■□□□□ 0.72
DDR1-244ENST00000482873 RLBP1P12271 317 aa19.53■□□□□ 0.72
DDR1-244ENST00000482873 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.52■□□□□ 0.72
DDR1-244ENST00000482873 WAPLQ7Z5K2 1190 aa19.52■□□□□ 0.72
DDR1-244ENST00000482873 A0A1W2PP64 1363 aa19.52■□□□□ 0.71
DDR1-244ENST00000482873 SEC24BO95487 1268 aa19.51■□□□□ 0.71
DDR1-244ENST00000482873 GLI2P10070 1586 aa19.51■□□□□ 0.71
DDR1-244ENST00000482873 TULP4Q9NRJ4 1543 aa19.51■□□□□ 0.71
DDR1-244ENST00000482873 PLEKHG5O94827 1062 aa19.51■□□□□ 0.71
DDR1-244ENST00000482873 RARSP54136 660 aaKnown RBP19.51■□□□□ 0.71
DDR1-244ENST00000482873 SETBP1Q9Y6X0 1596 aa19.5■□□□□ 0.71
DDR1-244ENST00000482873 CAMSAP1Q5T5Y3 1602 aa19.5■□□□□ 0.71
DDR1-244ENST00000482873 FAM43AQ8N2R8 423 aa19.5■□□□□ 0.71
DDR1-244ENST00000482873 CABP1Q9NZU7 370 aa19.49■□□□□ 0.71
DDR1-244ENST00000482873 DIP2CQ9Y2E4 1556 aa19.49■□□□□ 0.71
DDR1-244ENST00000482873 MYO3AQ8NEV4 1616 aa19.49■□□□□ 0.71
DDR1-244ENST00000482873 ANKRD36BQ8N2N9 1353 aa19.49■□□□□ 0.71
DDR1-244ENST00000482873 SLC52A1Q9NWF4 448 aa19.48■□□□□ 0.71
DDR1-244ENST00000482873 NEXMIFQ5QGS0 1516 aa19.48■□□□□ 0.71
DDR1-244ENST00000482873 FYB1O15117 783 aa19.48■□□□□ 0.71
DDR1-244ENST00000482873 CDK19Q9BWU1 502 aa19.47■□□□□ 0.71
DDR1-244ENST00000482873 VIRMAQ69YN4 1812 aaKnown RBP19.46■□□□□ 0.71
DDR1-244ENST00000482873 SLKQ9H2G2 1235 aaPredicted RBP19.46■□□□□ 0.71
DDR1-244ENST00000482873 PODXL2Q9NZ53 605 aa19.46■□□□□ 0.71
DDR1-244ENST00000482873 NEO1Q92859 1461 aa19.46■□□□□ 0.7
DDR1-244ENST00000482873 CFAP74Q9C0B2 1584 aa19.45■□□□□ 0.7
DDR1-244ENST00000482873 TSPOAP1O95153 1857 aa19.45■□□□□ 0.7
DDR1-244ENST00000482873 PCDHB15Q9Y5E8 787 aa19.45■□□□□ 0.7
DDR1-244ENST00000482873 SHPRHQ149N8 1683 aa19.44■□□□□ 0.7
DDR1-244ENST00000482873 NCKAP5LQ9HCH0 1330 aa19.43■□□□□ 0.7
DDR1-244ENST00000482873 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
DDR1-244ENST00000482873 PDE3AQ14432 1141 aa19.43■□□□□ 0.7
DDR1-244ENST00000482873 EXOSC9Q06265 439 aaKnown RBP19.42■□□□□ 0.7
DDR1-244ENST00000482873 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
DDR1-244ENST00000482873 RSPH6AQ9H0K4 717 aa19.42■□□□□ 0.7
DDR1-244ENST00000482873 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
DDR1-244ENST00000482873 TERF2IPQ9NYB0 399 aa19.41■□□□□ 0.7
DDR1-244ENST00000482873 WDR63Q8IWG1 891 aa19.41■□□□□ 0.7
DDR1-244ENST00000482873 PHF23Q9BUL5 403 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms