RNA–Protein interactions for RNA: ENST00000482769.1

IGKV2-28-201, Transcript of immunoglobulin kappa variable 2-28, humanhuman

APPRIS P1 BASIC

Gene IGKV2-28, Length 390 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28-201ENST00000482769 SF3B2Q13435 895 aaKnown RBP17.34■□□□□ 0.37
IGKV2-28-201ENST00000482769 ANKRD50Q9ULJ7 1429 aa17.33■□□□□ 0.36
IGKV2-28-201ENST00000482769 SLIT2O94813 1529 aa17.31■□□□□ 0.36
IGKV2-28-201ENST00000482769 PXDNQ92626 1479 aa17.31■□□□□ 0.36
IGKV2-28-201ENST00000482769 YY1P25490 414 aa17.29■□□□□ 0.36
IGKV2-28-201ENST00000482769 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
IGKV2-28-201ENST00000482769 PLCH1Q4KWH8 1693 aa17.27■□□□□ 0.36
IGKV2-28-201ENST00000482769 UNC5CLQ8IV45 518 aa17.27■□□□□ 0.36
IGKV2-28-201ENST00000482769 SEPT12Q8IYM1 358 aa17.26■□□□□ 0.35
IGKV2-28-201ENST00000482769 RGPD1P0DJD0 1748 aa17.26■□□□□ 0.35
IGKV2-28-201ENST00000482769 NEXMIFQ5QGS0 1516 aa17.25■□□□□ 0.35
IGKV2-28-201ENST00000482769 BAG6P46379 1132 aa17.24■□□□□ 0.35
IGKV2-28-201ENST00000482769 ROBO2Q9HCK4 1378 aa17.24■□□□□ 0.35
IGKV2-28-201ENST00000482769 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
IGKV2-28-201ENST00000482769 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
IGKV2-28-201ENST00000482769 TNS1Q9HBL0 1735 aaKnown RBP17.23■□□□□ 0.35
IGKV2-28-201ENST00000482769 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
IGKV2-28-201ENST00000482769 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
IGKV2-28-201ENST00000482769 CDC42BPGQ6DT37 1551 aa17.22■□□□□ 0.35
IGKV2-28-201ENST00000482769 KRT27Q7Z3Y8 459 aa17.21■□□□□ 0.35
IGKV2-28-201ENST00000482769 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
IGKV2-28-201ENST00000482769 EN1Q05925 392 aaPredicted RBP17.19■□□□□ 0.34
IGKV2-28-201ENST00000482769 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
IGKV2-28-201ENST00000482769 PRAG1Q86YV5 1406 aa17.18■□□□□ 0.34
IGKV2-28-201ENST00000482769 FOXO3O43524 673 aa17.17■□□□□ 0.34
IGKV2-28-201ENST00000482769 ESCO1Q5FWF5 840 aa17.17■□□□□ 0.34
IGKV2-28-201ENST00000482769 CLTCL1P53675 1640 aa17.17■□□□□ 0.34
IGKV2-28-201ENST00000482769 ONECUT3O60422 494 aaPredicted RBP17.16■□□□□ 0.34
IGKV2-28-201ENST00000482769 VPS72Q15906 364 aa17.16■□□□□ 0.34
IGKV2-28-201ENST00000482769 NRAPQ86VF7 1730 aa17.16■□□□□ 0.34
IGKV2-28-201ENST00000482769 KIF1BO60333 1816 aa17.14■□□□□ 0.34
IGKV2-28-201ENST00000482769 HFM1A2PYH4 1435 aa17.14■□□□□ 0.33
IGKV2-28-201ENST00000482769 DISP2A7MBM2 1401 aa17.13■□□□□ 0.33
IGKV2-28-201ENST00000482769 CCDC9Q9Y3X0 531 aaKnown RBP17.13■□□□□ 0.33
IGKV2-28-201ENST00000482769 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
IGKV2-28-201ENST00000482769 KIF1AQ12756 1690 aa17.12■□□□□ 0.33
IGKV2-28-201ENST00000482769 A0A0G2JS52 829 aa17.11■□□□□ 0.33
IGKV2-28-201ENST00000482769 MYT1Q01538 1121 aa17.11■□□□□ 0.33
IGKV2-28-201ENST00000482769 SPATA31A3Q5VYP0 1347 aa17.11■□□□□ 0.33
IGKV2-28-201ENST00000482769 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
IGKV2-28-201ENST00000482769 NUP155O75694 1391 aa17.1■□□□□ 0.33
IGKV2-28-201ENST00000482769 LRPPRCP42704 1394 aaKnown RBP17.1■□□□□ 0.33
IGKV2-28-201ENST00000482769 ADGRB2O60241 1585 aa17.1■□□□□ 0.33
IGKV2-28-201ENST00000482769 RREB1Q92766 1687 aa17.1■□□□□ 0.33
IGKV2-28-201ENST00000482769 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
IGKV2-28-201ENST00000482769 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
IGKV2-28-201ENST00000482769 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
IGKV2-28-201ENST00000482769 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
IGKV2-28-201ENST00000482769 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
IGKV2-28-201ENST00000482769 RGPD8O14715 1765 aaPredicted RBP17.08■□□□□ 0.33
IGKV2-28-201ENST00000482769 NUTM2FA1L443 756 aa17.08■□□□□ 0.32
IGKV2-28-201ENST00000482769 CCDC144AA2RUR9 1427 aa17.07■□□□□ 0.32
IGKV2-28-201ENST00000482769 NAIPQ13075 1403 aa17.07■□□□□ 0.32
IGKV2-28-201ENST00000482769 CABLES1Q8TDN4 633 aa17.07■□□□□ 0.32
IGKV2-28-201ENST00000482769 THSD7AQ9UPZ6 1657 aa17.07■□□□□ 0.32
IGKV2-28-201ENST00000482769 FAM98CQ17RN3 349 aaKnown RBP17.06■□□□□ 0.32
IGKV2-28-201ENST00000482769 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
IGKV2-28-201ENST00000482769 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
IGKV2-28-201ENST00000482769 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
IGKV2-28-201ENST00000482769 PPLO60437 1756 aa17.05■□□□□ 0.32
IGKV2-28-201ENST00000482769 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
IGKV2-28-201ENST00000482769 CAMKK2Q96RR4 588 aa17.02■□□□□ 0.32
IGKV2-28-201ENST00000482769 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
IGKV2-28-201ENST00000482769 APLP2Q06481 763 aa17.01■□□□□ 0.31
IGKV2-28-201ENST00000482769 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
IGKV2-28-201ENST00000482769 KRT28Q7Z3Y7 464 aa17■□□□□ 0.31
IGKV2-28-201ENST00000482769 ROCK1Q13464 1354 aa17■□□□□ 0.31
IGKV2-28-201ENST00000482769 COL14A1Q05707 1796 aaKnown RBP17■□□□□ 0.31
IGKV2-28-201ENST00000482769 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
IGKV2-28-201ENST00000482769 ZNF784Q8NCA9 323 aaPredicted RBP16.99■□□□□ 0.31
IGKV2-28-201ENST00000482769 CHD4Q14839 1912 aa16.98■□□□□ 0.31
IGKV2-28-201ENST00000482769 FAM83GA6ND36 823 aa16.98■□□□□ 0.31
IGKV2-28-201ENST00000482769 PPP1R1BQ9UD71 204 aaPredicted RBP16.98■□□□□ 0.31
IGKV2-28-201ENST00000482769 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
IGKV2-28-201ENST00000482769 PARD3Q8TEW0 1356 aa16.97■□□□□ 0.31
IGKV2-28-201ENST00000482769 VGFO15240 615 aaPredicted RBP16.96■□□□□ 0.31
IGKV2-28-201ENST00000482769 TRIM37O94972 964 aa16.96■□□□□ 0.31
IGKV2-28-201ENST00000482769 PLEKHH1Q9ULM0 1364 aa16.96■□□□□ 0.31
IGKV2-28-201ENST00000482769 TECPR2O15040 1411 aa16.96■□□□□ 0.3
IGKV2-28-201ENST00000482769 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
IGKV2-28-201ENST00000482769 BTG4Q9NY30 223 aa16.95■□□□□ 0.3
IGKV2-28-201ENST00000482769 CRYBG1Q9Y4K1 1723 aa16.94■□□□□ 0.3
IGKV2-28-201ENST00000482769 SPON1Q9HCB6 807 aa16.94■□□□□ 0.3
IGKV2-28-201ENST00000482769 NRKQ7Z2Y5 1582 aa16.94■□□□□ 0.3
IGKV2-28-201ENST00000482769 TRPM3Q9HCF6 1732 aaPredicted RBP16.93■□□□□ 0.3
IGKV2-28-201ENST00000482769 SBNO1A3KN83 1393 aa16.93■□□□□ 0.3
IGKV2-28-201ENST00000482769 ARHGEF10O15013 1369 aa16.93■□□□□ 0.3
IGKV2-28-201ENST00000482769 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
IGKV2-28-201ENST00000482769 LMOD2Q6P5Q4 547 aa16.93■□□□□ 0.3
IGKV2-28-201ENST00000482769 SPATA31A5Q5VU36 1347 aa16.93■□□□□ 0.3
IGKV2-28-201ENST00000482769 SPATA31A7Q8IWB4 1347 aa16.93■□□□□ 0.3
IGKV2-28-201ENST00000482769 NRXN1Q9ULB1 1477 aa16.93■□□□□ 0.3
IGKV2-28-201ENST00000482769 ALS2Q96Q42 1657 aa16.92■□□□□ 0.3
IGKV2-28-201ENST00000482769 KCNQ2O43526 872 aa16.92■□□□□ 0.3
IGKV2-28-201ENST00000482769 APBA3O96018 575 aa16.92■□□□□ 0.3
IGKV2-28-201ENST00000482769 MYOM1P52179 1685 aa16.91■□□□□ 0.3
IGKV2-28-201ENST00000482769 C1QTNF8P60827 252 aa16.91■□□□□ 0.3
IGKV2-28-201ENST00000482769 CASZ1Q86V15 1759 aa16.91■□□□□ 0.3
IGKV2-28-201ENST00000482769 PSME1Q06323 249 aa16.9■□□□□ 0.3
IGKV2-28-201ENST00000482769 STK26Q9P289 416 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms