RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 SLFN5Q08AF3 891 aa18.34■□□□□ 0.53
COL9A2-207ENST00000482722 ZNF521Q96K83 1311 aa18.34■□□□□ 0.53
COL9A2-207ENST00000482722 KIF1BO60333 1816 aa18.34■□□□□ 0.53
COL9A2-207ENST00000482722 SEC24BO95487 1268 aa18.34■□□□□ 0.53
COL9A2-207ENST00000482722 L1TD1Q5T7N2 865 aaKnown RBP18.33■□□□□ 0.53
COL9A2-207ENST00000482722 PKNOX2Q96KN3 472 aa18.33■□□□□ 0.53
COL9A2-207ENST00000482722 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
COL9A2-207ENST00000482722 NEO1Q92859 1461 aa18.33■□□□□ 0.53
COL9A2-207ENST00000482722 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.52
COL9A2-207ENST00000482722 IQGAP1P46940 1657 aa18.33■□□□□ 0.52
COL9A2-207ENST00000482722 VIRMAQ69YN4 1812 aaKnown RBP18.32■□□□□ 0.52
COL9A2-207ENST00000482722 ARXQ96QS3 562 aa18.32■□□□□ 0.52
COL9A2-207ENST00000482722 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
COL9A2-207ENST00000482722 DIP2CQ9Y2E4 1556 aa18.31■□□□□ 0.52
COL9A2-207ENST00000482722 NEUROD2Q15784 382 aa18.31■□□□□ 0.52
COL9A2-207ENST00000482722 SLC12A5Q9H2X9 1139 aa18.31■□□□□ 0.52
COL9A2-207ENST00000482722 SIGLEC1Q9BZZ2 1709 aa18.31■□□□□ 0.52
COL9A2-207ENST00000482722 ABCC3O15438 1527 aa18.31■□□□□ 0.52
COL9A2-207ENST00000482722 BECN1Q14457 450 aa18.3■□□□□ 0.52
COL9A2-207ENST00000482722 CARD14Q9BXL6 1004 aa18.3■□□□□ 0.52
COL9A2-207ENST00000482722 STAG3Q9UJ98 1225 aa18.29■□□□□ 0.52
COL9A2-207ENST00000482722 SYNMO15061 1565 aa18.29■□□□□ 0.52
COL9A2-207ENST00000482722 RICTORQ6R327 1708 aa18.29■□□□□ 0.52
COL9A2-207ENST00000482722 CFAP74Q9C0B2 1584 aa18.28■□□□□ 0.52
COL9A2-207ENST00000482722 MAP3K4Q9Y6R4 1608 aa18.28■□□□□ 0.52
COL9A2-207ENST00000482722 PANK1Q8TE04 598 aa18.28■□□□□ 0.52
COL9A2-207ENST00000482722 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
COL9A2-207ENST00000482722 COG6Q9Y2V7 657 aa18.28■□□□□ 0.52
COL9A2-207ENST00000482722 ANTXR1Q9H6X2 564 aa18.27■□□□□ 0.52
COL9A2-207ENST00000482722 CANXP27824 592 aaKnown RBP18.27■□□□□ 0.51
COL9A2-207ENST00000482722 NAP1L5Q96NT1 182 aaPredicted RBP18.27■□□□□ 0.51
COL9A2-207ENST00000482722 XRCC6P12956 609 aaKnown RBP eCLIP18.26■□□□□ 0.51
COL9A2-207ENST00000482722 STAC3Q96MF2 364 aa18.26■□□□□ 0.51
COL9A2-207ENST00000482722 PIK3C2GO75747 1445 aa18.26■□□□□ 0.51
COL9A2-207ENST00000482722 CENPJQ9HC77 1338 aaPredicted RBP18.26■□□□□ 0.51
COL9A2-207ENST00000482722 GLIPR1L2Q4G1C9 344 aa18.25■□□□□ 0.51
COL9A2-207ENST00000482722 RRP7AQ9Y3A4 280 aaKnown RBP18.25■□□□□ 0.51
COL9A2-207ENST00000482722 CABP2Q9NPB3 220 aa18.24■□□□□ 0.51
COL9A2-207ENST00000482722 NLRP1Q9C000 1473 aa18.24■□□□□ 0.51
COL9A2-207ENST00000482722 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
COL9A2-207ENST00000482722 MYOM1P52179 1685 aa18.23■□□□□ 0.51
COL9A2-207ENST00000482722 PANK2Q9BZ23 570 aa18.23■□□□□ 0.51
COL9A2-207ENST00000482722 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
COL9A2-207ENST00000482722 ERVK-7P63135 1459 aa18.23■□□□□ 0.51
COL9A2-207ENST00000482722 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
COL9A2-207ENST00000482722 DIP2BQ9P265 1576 aa18.23■□□□□ 0.51
COL9A2-207ENST00000482722 KDM5AP29375 1690 aaKnown RBP18.23■□□□□ 0.51
COL9A2-207ENST00000482722 SPRYD3Q8NCJ5 442 aa18.22■□□□□ 0.51
COL9A2-207ENST00000482722 NKTRP30414 1462 aaKnown RBP18.22■□□□□ 0.51
COL9A2-207ENST00000482722 GOLGA6L3A6NEY3 463 aa18.22■□□□□ 0.51
COL9A2-207ENST00000482722 VSIG10Q8N0Z9 540 aa18.22■□□□□ 0.51
COL9A2-207ENST00000482722 CAMSAP1Q5T5Y3 1602 aa18.22■□□□□ 0.51
COL9A2-207ENST00000482722 VGFO15240 615 aaPredicted RBP18.21■□□□□ 0.51
COL9A2-207ENST00000482722 MORC1Q86VD1 984 aa18.21■□□□□ 0.51
COL9A2-207ENST00000482722 ADGRB3O60242 1522 aa18.21■□□□□ 0.5
COL9A2-207ENST00000482722 GZF1Q9H116 711 aaPredicted RBP18.2■□□□□ 0.5
COL9A2-207ENST00000482722 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
COL9A2-207ENST00000482722 FSD2A1L4K1 749 aa18.2■□□□□ 0.5
COL9A2-207ENST00000482722 E9PSI1 815 aa18.2■□□□□ 0.5
COL9A2-207ENST00000482722 CLCN1P35523 988 aa18.2■□□□□ 0.5
COL9A2-207ENST00000482722 CLUAP1Q96AJ1 413 aa18.2■□□□□ 0.5
COL9A2-207ENST00000482722 MYO5BQ9ULV0 1848 aa18.2■□□□□ 0.5
COL9A2-207ENST00000482722 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
COL9A2-207ENST00000482722 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
COL9A2-207ENST00000482722 TBC1D2Q9BYX2 928 aa18.19■□□□□ 0.5
COL9A2-207ENST00000482722 ZMYND15Q9H091 742 aa18.19■□□□□ 0.5
COL9A2-207ENST00000482722 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
COL9A2-207ENST00000482722 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
COL9A2-207ENST00000482722 MYOM2P54296 1465 aa18.18■□□□□ 0.5
COL9A2-207ENST00000482722 HSP90AA2PQ14568 343 aaPredicted RBP18.17■□□□□ 0.5
COL9A2-207ENST00000482722 IFT172Q9UG01 1749 aa18.17■□□□□ 0.5
COL9A2-207ENST00000482722 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
COL9A2-207ENST00000482722 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
COL9A2-207ENST00000482722 WWC1Q8IX03 1113 aa18.16■□□□□ 0.5
COL9A2-207ENST00000482722 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
COL9A2-207ENST00000482722 TBC1D32Q96NH3 1257 aa18.16■□□□□ 0.5
COL9A2-207ENST00000482722 SLC52A1Q9NWF4 448 aa18.16■□□□□ 0.5
COL9A2-207ENST00000482722 PPLO60437 1756 aa18.15■□□□□ 0.5
COL9A2-207ENST00000482722 MCM4P33991 863 aa18.15■□□□□ 0.5
COL9A2-207ENST00000482722 CEBPAP49715 358 aaPredicted RBP18.15■□□□□ 0.5
COL9A2-207ENST00000482722 SLC24A1O60721 1099 aa18.14■□□□□ 0.49
COL9A2-207ENST00000482722 SRPK2P78362 688 aaKnown RBP18.14■□□□□ 0.49
COL9A2-207ENST00000482722 WAPLQ7Z5K2 1190 aa18.14■□□□□ 0.49
COL9A2-207ENST00000482722 PRAM1Q96QH2 718 aa18.14■□□□□ 0.49
COL9A2-207ENST00000482722 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
COL9A2-207ENST00000482722 PCDHB15Q9Y5E8 787 aa18.13■□□□□ 0.49
COL9A2-207ENST00000482722 RRP9O43818 475 aaKnown RBP18.13■□□□□ 0.49
COL9A2-207ENST00000482722 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
COL9A2-207ENST00000482722 ESF1Q9H501 851 aaKnown RBP18.13■□□□□ 0.49
COL9A2-207ENST00000482722 NRXN1Q9ULB1 1477 aa18.13■□□□□ 0.49
COL9A2-207ENST00000482722 GLI2P10070 1586 aa18.13■□□□□ 0.49
COL9A2-207ENST00000482722 RLBP1P12271 317 aa18.13■□□□□ 0.49
COL9A2-207ENST00000482722 RPGRIP1LQ68CZ1 1315 aa18.12■□□□□ 0.49
COL9A2-207ENST00000482722 TCP11L2Q8N4U5 519 aa18.12■□□□□ 0.49
COL9A2-207ENST00000482722 MTHFSP49914 203 aa18.11■□□□□ 0.49
COL9A2-207ENST00000482722 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
COL9A2-207ENST00000482722 FBLN1P23142 703 aa18.1■□□□□ 0.49
COL9A2-207ENST00000482722 ADGRB1O14514 1584 aa18.1■□□□□ 0.49
COL9A2-207ENST00000482722 KIAA1210Q9ULL0 1709 aa18.1■□□□□ 0.49
COL9A2-207ENST00000482722 PIK3C2BO00750 1634 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms