RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, humanhuman

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-208ENST00000482183 WDR63Q8IWG1 891 aa13.07□□□□□ -0.32
CAPN8-208ENST00000482183 TRMT2AQ8IZ69 625 aaKnown RBP13.07□□□□□ -0.32
CAPN8-208ENST00000482183 RUNDC1Q96C34 613 aa13.07□□□□□ -0.32
CAPN8-208ENST00000482183 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
CAPN8-208ENST00000482183 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
CAPN8-208ENST00000482183 MED14O60244 1454 aa13.06□□□□□ -0.32
CAPN8-208ENST00000482183 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
CAPN8-208ENST00000482183 NSD3Q9BZ95 1437 aa13.05□□□□□ -0.32
CAPN8-208ENST00000482183 RAPGEF3O95398 923 aa13.05□□□□□ -0.32
CAPN8-208ENST00000482183 HDGFL2Q7Z4V5 671 aaPredicted RBP13.05□□□□□ -0.32
CAPN8-208ENST00000482183 DDRGK1Q96HY6 314 aa13.05□□□□□ -0.32
CAPN8-208ENST00000482183 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
CAPN8-208ENST00000482183 MYH16Q9H6N6 1097 aa13.04□□□□□ -0.32
CAPN8-208ENST00000482183 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
CAPN8-208ENST00000482183 NEFMP07197 916 aa13.03□□□□□ -0.32
CAPN8-208ENST00000482183 IDI1Q13907 227 aa13.03□□□□□ -0.32
CAPN8-208ENST00000482183 EXOC6Q8TAG9 804 aa13.03□□□□□ -0.32
CAPN8-208ENST00000482183 ESF1Q9H501 851 aaKnown RBP13.03□□□□□ -0.32
CAPN8-208ENST00000482183 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.33
CAPN8-208ENST00000482183 CARD14Q9BXL6 1004 aa13.02□□□□□ -0.33
CAPN8-208ENST00000482183 PREX1Q8TCU6 1659 aa13.02□□□□□ -0.33
CAPN8-208ENST00000482183 APAF1O14727 1248 aa13.01□□□□□ -0.33
CAPN8-208ENST00000482183 SIRT1Q96EB6 747 aa13.01□□□□□ -0.33
CAPN8-208ENST00000482183 IPO9Q96P70 1041 aaKnown RBP13.01□□□□□ -0.33
CAPN8-208ENST00000482183 POGKQ9P215 609 aa13.01□□□□□ -0.33
CAPN8-208ENST00000482183 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
CAPN8-208ENST00000482183 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
CAPN8-208ENST00000482183 ABCC11Q96J66 1382 aa13□□□□□ -0.33
CAPN8-208ENST00000482183 FAM69CQ0P6D2 419 aa13□□□□□ -0.33
CAPN8-208ENST00000482183 CHMP4BQ9H444 224 aaKnown RBP13□□□□□ -0.33
CAPN8-208ENST00000482183 NOP58Q9Y2X3 529 aaKnown RBP13□□□□□ -0.33
CAPN8-208ENST00000482183 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
CAPN8-208ENST00000482183 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
CAPN8-208ENST00000482183 PLEKHH1Q9ULM0 1364 aa12.99□□□□□ -0.33
CAPN8-208ENST00000482183 CALD1Q05682 793 aaKnown RBP12.99□□□□□ -0.33
CAPN8-208ENST00000482183 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
CAPN8-208ENST00000482183 ZMYM3Q14202 1370 aa12.98□□□□□ -0.33
CAPN8-208ENST00000482183 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
CAPN8-208ENST00000482183 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
CAPN8-208ENST00000482183 SLC12A5Q9H2X9 1139 aa12.98□□□□□ -0.33
CAPN8-208ENST00000482183 DIP2BQ9P265 1576 aa12.98□□□□□ -0.33
CAPN8-208ENST00000482183 IL16Q14005 1332 aa12.97□□□□□ -0.33
CAPN8-208ENST00000482183 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
CAPN8-208ENST00000482183 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
CAPN8-208ENST00000482183 ZNF428Q96B54 188 aa12.97□□□□□ -0.33
CAPN8-208ENST00000482183 CRBNQ96SW2 442 aa12.97□□□□□ -0.33
CAPN8-208ENST00000482183 CLTCQ00610 1675 aaKnown RBP12.96□□□□□ -0.33
CAPN8-208ENST00000482183 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
CAPN8-208ENST00000482183 SPATA31D1Q6ZQQ2 1576 aa12.96□□□□□ -0.33
CAPN8-208ENST00000482183 TMEM132EQ6IEE7 984 aa12.96□□□□□ -0.33
CAPN8-208ENST00000482183 YEATS2Q9ULM3 1422 aa12.96□□□□□ -0.34
CAPN8-208ENST00000482183 MTHFSP49914 203 aa12.95□□□□□ -0.34
CAPN8-208ENST00000482183 PHF23Q9BUL5 403 aaPredicted RBP12.95□□□□□ -0.34
CAPN8-208ENST00000482183 BACH2Q9BYV9 841 aa12.95□□□□□ -0.34
CAPN8-208ENST00000482183 SIGLEC1Q9BZZ2 1709 aa12.95□□□□□ -0.34
CAPN8-208ENST00000482183 TULP4Q9NRJ4 1543 aa12.94□□□□□ -0.34
CAPN8-208ENST00000482183 ATP7BP35670 1465 aa12.94□□□□□ -0.34
CAPN8-208ENST00000482183 PDE4AP27815 886 aa12.94□□□□□ -0.34
CAPN8-208ENST00000482183 DAXXQ9UER7 740 aaPredicted RBP12.94□□□□□ -0.34
CAPN8-208ENST00000482183 EIF5BO60841 1220 aaKnown RBP12.93□□□□□ -0.34
CAPN8-208ENST00000482183 HAP1P54257 671 aaPredicted RBP12.93□□□□□ -0.34
CAPN8-208ENST00000482183 TCP11L2Q8N4U5 519 aa12.93□□□□□ -0.34
CAPN8-208ENST00000482183 USP35Q9P2H5 1018 aa12.93□□□□□ -0.34
CAPN8-208ENST00000482183 PTPRMP28827 1452 aa12.92□□□□□ -0.34
CAPN8-208ENST00000482183 ALKQ9UM73 1620 aa12.92□□□□□ -0.34
CAPN8-208ENST00000482183 CCDC146Q8IYE0 955 aa12.92□□□□□ -0.34
CAPN8-208ENST00000482183 KDM2BQ8NHM5 1336 aa12.91□□□□□ -0.34
CAPN8-208ENST00000482183 FAM135BQ49AJ0 1406 aa12.91□□□□□ -0.34
CAPN8-208ENST00000482183 PPM1GO15355 546 aaPredicted RBP12.91□□□□□ -0.34
CAPN8-208ENST00000482183 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CAPN8-208ENST00000482183 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.34
CAPN8-208ENST00000482183 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
CAPN8-208ENST00000482183 PRAM1Q96QH2 718 aa12.91□□□□□ -0.34
CAPN8-208ENST00000482183 ZNF692Q9BU19 519 aaPredicted RBP12.91□□□□□ -0.34
CAPN8-208ENST00000482183 IQSEC2Q5JU85 1478 aa12.91□□□□□ -0.34
CAPN8-208ENST00000482183 ANKRD26Q9UPS8 1709 aa12.91□□□□□ -0.34
CAPN8-208ENST00000482183 CFAP65Q6ZU64 1925 aaKnown RBP12.9□□□□□ -0.34
CAPN8-208ENST00000482183 RIMS2Q9UQ26 1411 aa12.9□□□□□ -0.34
CAPN8-208ENST00000482183 IPO8O15397 1037 aaKnown RBP12.9□□□□□ -0.34
CAPN8-208ENST00000482183 FCHSD2O94868 740 aa12.9□□□□□ -0.34
CAPN8-208ENST00000482183 LMOD3Q0VAK6 560 aa12.9□□□□□ -0.34
CAPN8-208ENST00000482183 RTL5Q5HYW3 569 aaPredicted RBP12.9□□□□□ -0.34
CAPN8-208ENST00000482183 A0A1W2PP64 1363 aa12.9□□□□□ -0.34
CAPN8-208ENST00000482183 ARHGEF40Q8TER5 1519 aa12.89□□□□□ -0.35
CAPN8-208ENST00000482183 DIAPH1O60610 1272 aaKnown RBP12.89□□□□□ -0.35
CAPN8-208ENST00000482183 CABP2Q9NPB3 220 aa12.89□□□□□ -0.35
CAPN8-208ENST00000482183 A2ML1A8K2U0 1454 aa12.89□□□□□ -0.35
CAPN8-208ENST00000482183 PLIN1O60240 522 aa12.88□□□□□ -0.35
CAPN8-208ENST00000482183 CLUAP1Q96AJ1 413 aa12.88□□□□□ -0.35
CAPN8-208ENST00000482183 RWDD1Q9H446 243 aaPredicted RBP12.88□□□□□ -0.35
CAPN8-208ENST00000482183 SHPRHQ149N8 1683 aa12.88□□□□□ -0.35
CAPN8-208ENST00000482183 PNPLA6Q8IY17 1366 aa12.87□□□□□ -0.35
CAPN8-208ENST00000482183 MSH5O43196 834 aa12.87□□□□□ -0.35
CAPN8-208ENST00000482183 CDK19Q9BWU1 502 aa12.87□□□□□ -0.35
CAPN8-208ENST00000482183 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
CAPN8-208ENST00000482183 STK26Q9P289 416 aa12.87□□□□□ -0.35
CAPN8-208ENST00000482183 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
CAPN8-208ENST00000482183 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
CAPN8-208ENST00000482183 ADGRB2O60241 1585 aa12.86□□□□□ -0.35
CAPN8-208ENST00000482183 RARSP54136 660 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms