RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 C14orf37Q86TY3 774 aa32.41■■■□□ 2.78
SHISA4-203ENST00000481699 UBAP1LF5GYI3 381 aa32.39■■■□□ 2.78
SHISA4-203ENST00000481699 PLEKHH1Q9ULM0 1364 aa32.38■■■□□ 2.77
SHISA4-203ENST00000481699 STRCP1A6NGW2 1772 aa32.37■■■□□ 2.77
SHISA4-203ENST00000481699 RBM33Q96EV2 1170 aaKnown RBP32.35■■■□□ 2.77
SHISA4-203ENST00000481699 MINK1Q8N4C8 1332 aaPredicted RBP32.34■■■□□ 2.77
SHISA4-203ENST00000481699 SLC24A1O60721 1099 aa32.34■■■□□ 2.77
SHISA4-203ENST00000481699 TMEM94Q12767 1356 aa32.33■■■□□ 2.77
SHISA4-203ENST00000481699 HIRIP3Q9BW71 556 aaPredicted RBP32.32■■■□□ 2.76
SHISA4-203ENST00000481699 QRICH2Q9H0J4 1663 aa32.31■■■□□ 2.76
SHISA4-203ENST00000481699 LRRC7Q96NW7 1537 aa32.31■■■□□ 2.76
SHISA4-203ENST00000481699 NCOA3Q9Y6Q9 1424 aa32.29■■■□□ 2.76
SHISA4-203ENST00000481699 SBNO2Q9Y2G9 1366 aa32.27■■■□□ 2.76
SHISA4-203ENST00000481699 TMF1P82094 1093 aa32.26■■■□□ 2.75
SHISA4-203ENST00000481699 ADGRL3Q9HAR2 1447 aa32.26■■■□□ 2.75
SHISA4-203ENST00000481699 EVC2Q86UK5 1308 aa32.25■■■□□ 2.75
SHISA4-203ENST00000481699 MSH6P52701 1360 aa32.24■■■□□ 2.75
SHISA4-203ENST00000481699 TESK2Q96S53 571 aa32.24■■■□□ 2.75
SHISA4-203ENST00000481699 C19orf44Q9H6X5 657 aa32.23■■■□□ 2.75
SHISA4-203ENST00000481699 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.21■■■□□ 2.75
SHISA4-203ENST00000481699 WASLO00401 505 aaPredicted RBP32.19■■■□□ 2.74
SHISA4-203ENST00000481699 ATF3P18847 181 aa32.19■■■□□ 2.74
SHISA4-203ENST00000481699 CDCA8Q53HL2 280 aa32.19■■■□□ 2.74
SHISA4-203ENST00000481699 NALCNQ8IZF0 1738 aa32.18■■■□□ 2.74
SHISA4-203ENST00000481699 SRPK2P78362 688 aaKnown RBP32.18■■■□□ 2.74
SHISA4-203ENST00000481699 SCAF1Q9H7N4 1312 aaKnown RBP32.18■■■□□ 2.74
SHISA4-203ENST00000481699 ADGRB2O60241 1585 aa32.17■■■□□ 2.74
SHISA4-203ENST00000481699 CDK19Q9BWU1 502 aa32.17■■■□□ 2.74
SHISA4-203ENST00000481699 CADPS2Q86UW7 1296 aa32.14■■■□□ 2.74
SHISA4-203ENST00000481699 POLR3GLQ9BT43 218 aa32.14■■■□□ 2.74
SHISA4-203ENST00000481699 CDC42BPGQ6DT37 1551 aa32.14■■■□□ 2.74
SHISA4-203ENST00000481699 DCCP43146 1447 aa32.13■■■□□ 2.73
SHISA4-203ENST00000481699 TULP4Q9NRJ4 1543 aa32.12■■■□□ 2.73
SHISA4-203ENST00000481699 PIP4K2BP78356 416 aa32.11■■■□□ 2.73
SHISA4-203ENST00000481699 CABP2Q9NPB3 220 aa32.11■■■□□ 2.73
SHISA4-203ENST00000481699 XIRP1Q702N8 1843 aaKnown RBP32.11■■■□□ 2.73
SHISA4-203ENST00000481699 HSPA1LP34931 641 aa32.1■■■□□ 2.73
SHISA4-203ENST00000481699 NUTM2FA1L443 756 aa32.09■■■□□ 2.73
SHISA4-203ENST00000481699 MED1Q15648 1581 aaPredicted RBP32.09■■■□□ 2.73
SHISA4-203ENST00000481699 ZNF316A6NFI3 1004 aaPredicted RBP32.07■■■□□ 2.72
SHISA4-203ENST00000481699 PUS7Q96PZ0 661 aaKnown RBP32.06■■■□□ 2.72
SHISA4-203ENST00000481699 ATAD2Q6PL18 1390 aa32.05■■■□□ 2.72
SHISA4-203ENST00000481699 NUDT16Q96DE0 195 aaKnown RBP32.04■■■□□ 2.72
SHISA4-203ENST00000481699 ANKARQ7Z5J8 1434 aa32.03■■■□□ 2.72
SHISA4-203ENST00000481699 FMN2Q9NZ56 1722 aa32.03■■■□□ 2.72
SHISA4-203ENST00000481699 C11orf95C9JLR9 678 aaPredicted RBP32.02■■■□□ 2.72
SHISA4-203ENST00000481699 KIF7Q2M1P5 1343 aa32.01■■■□□ 2.72
SHISA4-203ENST00000481699 CCDC7Q96M83 1385 aa31.99■■■□□ 2.71
SHISA4-203ENST00000481699 TMC1Q8TDI8 760 aa31.99■■■□□ 2.71
SHISA4-203ENST00000481699 CCDC61Q9Y6R9 512 aa31.99■■■□□ 2.71
SHISA4-203ENST00000481699 TOM1O60784 492 aa31.98■■■□□ 2.71
SHISA4-203ENST00000481699 SLAIN2Q9P270 581 aa31.97■■■□□ 2.71
SHISA4-203ENST00000481699 MST1RQ04912 1400 aa31.97■■■□□ 2.71
SHISA4-203ENST00000481699 PRR36Q9H6K5 1346 aa31.97■■■□□ 2.71
SHISA4-203ENST00000481699 ESCO1Q5FWF5 840 aa31.96■■■□□ 2.71
SHISA4-203ENST00000481699 ATP7BP35670 1465 aa31.96■■■□□ 2.71
SHISA4-203ENST00000481699 C1orf167Q5SNV9 1468 aa31.96■■■□□ 2.71
SHISA4-203ENST00000481699 WASHC2AQ641Q2 1341 aa31.96■■■□□ 2.71
SHISA4-203ENST00000481699 PPIP5K1Q6PFW1 1433 aa31.93■■■□□ 2.7
SHISA4-203ENST00000481699 NINLQ9Y2I6 1382 aa31.93■■■□□ 2.7
SHISA4-203ENST00000481699 CABP1Q9NZU7 370 aa31.91■■■□□ 2.7
SHISA4-203ENST00000481699 USP32Q8NFA0 1604 aa31.9■■■□□ 2.7
SHISA4-203ENST00000481699 PHF8Q9UPP1 1060 aa31.9■■■□□ 2.7
SHISA4-203ENST00000481699 ITSN1Q15811 1721 aa31.89■■■□□ 2.7
SHISA4-203ENST00000481699 ORAI2Q96SN7 254 aa31.88■■■□□ 2.69
SHISA4-203ENST00000481699 NGDNQ8NEJ9 315 aaKnown RBP31.87■■■□□ 2.69
SHISA4-203ENST00000481699 PMFBP1Q8TBY8 1022 aa31.87■■■□□ 2.69
SHISA4-203ENST00000481699 SLC12A5Q9H2X9 1139 aa31.87■■■□□ 2.69
SHISA4-203ENST00000481699 HDGFL2Q7Z4V5 671 aaPredicted RBP31.86■■■□□ 2.69
SHISA4-203ENST00000481699 PHF23Q9BUL5 403 aaPredicted RBP31.86■■■□□ 2.69
SHISA4-203ENST00000481699 TERF2IPQ9NYB0 399 aa31.86■■■□□ 2.69
SHISA4-203ENST00000481699 PLEKHG3A1L390 1219 aa31.85■■■□□ 2.69
SHISA4-203ENST00000481699 TOPAZ1Q8N9V7 1692 aa31.84■■■□□ 2.69
SHISA4-203ENST00000481699 RGPD8O14715 1765 aaPredicted RBP31.83■■■□□ 2.69
SHISA4-203ENST00000481699 BRINP3Q76B58 766 aa31.82■■■□□ 2.68
SHISA4-203ENST00000481699 ACEP12821 1306 aa31.8■■■□□ 2.68
SHISA4-203ENST00000481699 KIF1AQ12756 1690 aa31.8■■■□□ 2.68
SHISA4-203ENST00000481699 ZNF692Q9BU19 519 aaPredicted RBP31.78■■■□□ 2.68
SHISA4-203ENST00000481699 ANKRD36BQ8N2N9 1353 aa31.78■■■□□ 2.68
SHISA4-203ENST00000481699 MYOM1P52179 1685 aa31.77■■■□□ 2.68
SHISA4-203ENST00000481699 FOXO3O43524 673 aa31.77■■■□□ 2.68
SHISA4-203ENST00000481699 PSME1Q06323 249 aa31.77■■■□□ 2.68
SHISA4-203ENST00000481699 DDX10Q13206 875 aaKnown RBP31.76■■■□□ 2.67
SHISA4-203ENST00000481699 PANK3Q9H999 370 aa31.76■■■□□ 2.67
SHISA4-203ENST00000481699 NPHP3Q7Z494 1330 aa31.75■■■□□ 2.67
SHISA4-203ENST00000481699 POLR3AO14802 1390 aaPredicted RBP31.75■■■□□ 2.67
SHISA4-203ENST00000481699 KTN1Q86UP2 1357 aaKnown RBP31.75■■■□□ 2.67
SHISA4-203ENST00000481699 A0A1W2PP64 1363 aa31.73■■■□□ 2.67
SHISA4-203ENST00000481699 ROBO1Q9Y6N7 1651 aa31.72■■■□□ 2.67
SHISA4-203ENST00000481699 CPSF1Q10570 1443 aaKnown RBP31.71■■■□□ 2.67
SHISA4-203ENST00000481699 KRT28Q7Z3Y7 464 aa31.69■■■□□ 2.66
SHISA4-203ENST00000481699 CD163L1Q9NR16 1453 aa31.69■■■□□ 2.66
SHISA4-203ENST00000481699 XPCQ01831 940 aaPredicted RBP31.68■■■□□ 2.66
SHISA4-203ENST00000481699 DDX17Q92841 729 aaKnown RBP31.67■■■□□ 2.66
SHISA4-203ENST00000481699 USP6P35125 1406 aa31.66■■■□□ 2.66
SHISA4-203ENST00000481699 PAK3O75914 559 aaPredicted RBP31.66■■■□□ 2.66
SHISA4-203ENST00000481699 KNSTRNQ9Y448 316 aa31.66■■■□□ 2.66
SHISA4-203ENST00000481699 BRD4O60885 1362 aaPredicted RBP31.65■■■□□ 2.66
SHISA4-203ENST00000481699 EDC4Q6P2E9 1401 aaKnown RBP31.65■■■□□ 2.66
SHISA4-203ENST00000481699 NSD3Q9BZ95 1437 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms