RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 SAFB2Q14151 953 aaKnown RBP eCLIP24.63■■□□□ 1.53
MRPL28-209ENST00000481453 PRAM1Q96QH2 718 aa24.61■■□□□ 1.53
MRPL28-209ENST00000481453 DLC1Q96QB1 1528 aa24.61■■□□□ 1.53
MRPL28-209ENST00000481453 TRHP20396 242 aaPredicted RBP24.59■■□□□ 1.53
MRPL28-209ENST00000481453 CABP2Q9NPB3 220 aa24.59■■□□□ 1.53
MRPL28-209ENST00000481453 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.58■■□□□ 1.52
MRPL28-209ENST00000481453 NUDCQ9Y266 331 aa24.58■■□□□ 1.52
MRPL28-209ENST00000481453 C3P01024 1663 aa24.57■■□□□ 1.52
MRPL28-209ENST00000481453 ANKRD36BQ8N2N9 1353 aa24.56■■□□□ 1.52
MRPL28-209ENST00000481453 B4GALNT3Q6L9W6 998 aa24.56■■□□□ 1.52
MRPL28-209ENST00000481453 MINK1Q8N4C8 1332 aaPredicted RBP24.55■■□□□ 1.52
MRPL28-209ENST00000481453 FER1L4A9Z1Z3 1794 aa24.55■■□□□ 1.52
MRPL28-209ENST00000481453 POGKQ9P215 609 aa24.55■■□□□ 1.52
MRPL28-209ENST00000481453 TMEM2Q9UHN6 1383 aa24.55■■□□□ 1.52
MRPL28-209ENST00000481453 NLRP1Q9C000 1473 aa24.54■■□□□ 1.52
MRPL28-209ENST00000481453 ABCC11Q96J66 1382 aa24.53■■□□□ 1.52
MRPL28-209ENST00000481453 ADAMTS8Q9UP79 889 aa24.53■■□□□ 1.52
MRPL28-209ENST00000481453 METP08581 1390 aa24.53■■□□□ 1.52
MRPL28-209ENST00000481453 NINLQ9Y2I6 1382 aa24.53■■□□□ 1.52
MRPL28-209ENST00000481453 CEBPAP49715 358 aaPredicted RBP24.52■■□□□ 1.52
MRPL28-209ENST00000481453 PLEKHH1Q9ULM0 1364 aa24.51■■□□□ 1.51
MRPL28-209ENST00000481453 SRPK2P78362 688 aaKnown RBP24.5■■□□□ 1.51
MRPL28-209ENST00000481453 ATAD2Q6PL18 1390 aa24.5■■□□□ 1.51
MRPL28-209ENST00000481453 KNDC1Q76NI1 1749 aa24.5■■□□□ 1.51
MRPL28-209ENST00000481453 FANCIQ9NVI1 1328 aa24.49■■□□□ 1.51
MRPL28-209ENST00000481453 A0A1W2PP64 1363 aa24.49■■□□□ 1.51
MRPL28-209ENST00000481453 CD163L1Q9NR16 1453 aa24.48■■□□□ 1.51
MRPL28-209ENST00000481453 HDGFP51858 240 aaKnown RBP24.47■■□□□ 1.51
MRPL28-209ENST00000481453 WAPLQ7Z5K2 1190 aa24.47■■□□□ 1.51
MRPL28-209ENST00000481453 CGNL1Q0VF96 1302 aa24.47■■□□□ 1.51
MRPL28-209ENST00000481453 WDR43Q15061 677 aaKnown RBP eCLIP24.46■■□□□ 1.51
MRPL28-209ENST00000481453 SALL2Q9Y467 1007 aaPredicted RBP24.46■■□□□ 1.51
MRPL28-209ENST00000481453 TECPR2O15040 1411 aa24.46■■□□□ 1.51
MRPL28-209ENST00000481453 CDK19Q9BWU1 502 aa24.46■■□□□ 1.51
MRPL28-209ENST00000481453 ADAMTS13Q76LX8 1427 aa24.45■■□□□ 1.5
MRPL28-209ENST00000481453 MORC1Q86VD1 984 aa24.45■■□□□ 1.5
MRPL28-209ENST00000481453 RNF123Q5XPI4 1314 aa24.45■■□□□ 1.5
MRPL28-209ENST00000481453 POLR3AO14802 1390 aaPredicted RBP24.44■■□□□ 1.5
MRPL28-209ENST00000481453 NSD2O96028 1365 aa24.44■■□□□ 1.5
MRPL28-209ENST00000481453 CPS1P31327 1500 aa24.44■■□□□ 1.5
MRPL28-209ENST00000481453 MSH5O43196 834 aa24.43■■□□□ 1.5
MRPL28-209ENST00000481453 PDE3BQ13370 1112 aa24.43■■□□□ 1.5
MRPL28-209ENST00000481453 LTKP29376 864 aa24.42■■□□□ 1.5
MRPL28-209ENST00000481453 SHPRHQ149N8 1683 aa24.42■■□□□ 1.5
MRPL28-209ENST00000481453 PLEKHG1Q9ULL1 1385 aa24.42■■□□□ 1.5
MRPL28-209ENST00000481453 FAM135BQ49AJ0 1406 aa24.41■■□□□ 1.5
MRPL28-209ENST00000481453 ARHGAP23Q9P227 1491 aa24.41■■□□□ 1.5
MRPL28-209ENST00000481453 SLIT1O75093 1534 aa24.41■■□□□ 1.5
MRPL28-209ENST00000481453 SIRT1Q96EB6 747 aa24.39■■□□□ 1.49
MRPL28-209ENST00000481453 MED14O60244 1454 aa24.39■■□□□ 1.49
MRPL28-209ENST00000481453 TXNDC2Q86VQ3 553 aa24.38■■□□□ 1.49
MRPL28-209ENST00000481453 CDCA7LQ96GN5 454 aa24.38■■□□□ 1.49
MRPL28-209ENST00000481453 TNNT2P45379 298 aaPredicted RBP24.38■■□□□ 1.49
MRPL28-209ENST00000481453 ANKRD26Q9UPS8 1709 aa24.38■■□□□ 1.49
MRPL28-209ENST00000481453 TERF2IPQ9NYB0 399 aa24.37■■□□□ 1.49
MRPL28-209ENST00000481453 CABP1Q9NZU7 370 aa24.35■■□□□ 1.49
MRPL28-209ENST00000481453 ATP7BP35670 1465 aa24.34■■□□□ 1.49
MRPL28-209ENST00000481453 ZNF521Q96K83 1311 aa24.34■■□□□ 1.49
MRPL28-209ENST00000481453 PLPPR3Q6T4P5 718 aa24.34■■□□□ 1.49
MRPL28-209ENST00000481453 CCDC136Q96JN2 1154 aa24.33■■□□□ 1.49
MRPL28-209ENST00000481453 ROBO2Q9HCK4 1378 aa24.33■■□□□ 1.49
MRPL28-209ENST00000481453 WASLO00401 505 aaPredicted RBP24.33■■□□□ 1.48
MRPL28-209ENST00000481453 CCDC146Q8IYE0 955 aa24.33■■□□□ 1.48
MRPL28-209ENST00000481453 MTHFSP49914 203 aa24.31■■□□□ 1.48
MRPL28-209ENST00000481453 KIF20BQ96Q89 1820 aa24.31■■□□□ 1.48
MRPL28-209ENST00000481453 FYB1O15117 783 aa24.31■■□□□ 1.48
MRPL28-209ENST00000481453 HDGFL2Q7Z4V5 671 aaPredicted RBP24.31■■□□□ 1.48
MRPL28-209ENST00000481453 RIMS1Q86UR5 1692 aaKnown RBP24.3■■□□□ 1.48
MRPL28-209ENST00000481453 PTPRUQ92729 1446 aa24.3■■□□□ 1.48
MRPL28-209ENST00000481453 GGNBP2Q9H3C7 697 aa24.3■■□□□ 1.48
MRPL28-209ENST00000481453 ERICH6Q7L0X2 663 aa24.29■■□□□ 1.48
MRPL28-209ENST00000481453 EID1Q9Y6B2 187 aa24.29■■□□□ 1.48
MRPL28-209ENST00000481453 ADGRB2O60241 1585 aa24.28■■□□□ 1.48
MRPL28-209ENST00000481453 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.28■■□□□ 1.48
MRPL28-209ENST00000481453 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.48
MRPL28-209ENST00000481453 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
MRPL28-209ENST00000481453 RCAN3Q9UKA8 241 aa24.27■■□□□ 1.48
MRPL28-209ENST00000481453 PPIP5K1Q6PFW1 1433 aa24.27■■□□□ 1.48
MRPL28-209ENST00000481453 APAF1O14727 1248 aa24.26■■□□□ 1.47
MRPL28-209ENST00000481453 CEP170BQ9Y4F5 1589 aaPredicted RBP24.26■■□□□ 1.47
MRPL28-209ENST00000481453 SLC26A8Q96RN1 970 aa24.26■■□□□ 1.47
MRPL28-209ENST00000481453 THEMISQ8N1K5 641 aaPredicted RBP24.25■■□□□ 1.47
MRPL28-209ENST00000481453 ADAMTSL3P82987 1691 aa24.24■■□□□ 1.47
MRPL28-209ENST00000481453 CDC42BPGQ6DT37 1551 aa24.24■■□□□ 1.47
MRPL28-209ENST00000481453 COL3A1P02461 1466 aaPredicted RBP24.24■■□□□ 1.47
MRPL28-209ENST00000481453 DIP2AQ14689 1571 aa24.23■■□□□ 1.47
MRPL28-209ENST00000481453 NUDT16Q96DE0 195 aaKnown RBP24.23■■□□□ 1.47
MRPL28-209ENST00000481453 CFAP53Q96M91 514 aa24.23■■□□□ 1.47
MRPL28-209ENST00000481453 RRP1P56182 461 aaKnown RBP24.22■■□□□ 1.47
MRPL28-209ENST00000481453 IQSEC2Q5JU85 1478 aa24.22■■□□□ 1.47
MRPL28-209ENST00000481453 TBX22Q9Y458 520 aa24.22■■□□□ 1.47
MRPL28-209ENST00000481453 MON2Q7Z3U7 1717 aa24.21■■□□□ 1.47
MRPL28-209ENST00000481453 PRR36Q9H6K5 1346 aa24.21■■□□□ 1.47
MRPL28-209ENST00000481453 AKAP12Q02952 1782 aa24.21■■□□□ 1.47
MRPL28-209ENST00000481453 NCKAP5LQ9HCH0 1330 aa24.21■■□□□ 1.47
MRPL28-209ENST00000481453 DUSP27Q5VZP5 1158 aa24.2■■□□□ 1.47
MRPL28-209ENST00000481453 EDC4Q6P2E9 1401 aaKnown RBP24.2■■□□□ 1.46
MRPL28-209ENST00000481453 GOLGA2Q08379 1002 aa24.2■■□□□ 1.46
MRPL28-209ENST00000481453 TOPAZ1Q8N9V7 1692 aa24.19■■□□□ 1.46
MRPL28-209ENST00000481453 NGEFQ8N5V2 710 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms