RNA–Protein interactions for RNA: ENST00000481383.1

FXR1-215, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 3

Gene FXR1, Length 909 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-215ENST00000481383 CYP4X1Q8N118 509 aa12.22□□□□□ -0.45
FXR1-215ENST00000481383 AVPP01185 164 aa12.21□□□□□ -0.45
FXR1-215ENST00000481383 MMP16P51512 607 aa12.21□□□□□ -0.45
FXR1-215ENST00000481383 Q3C1V9 767 aa12.21□□□□□ -0.45
FXR1-215ENST00000481383 CRIPAKQ8N1N5 446 aa12.21□□□□□ -0.45
FXR1-215ENST00000481383 ZBTB24O43167 697 aaPredicted RBP12.2□□□□□ -0.46
FXR1-215ENST00000481383 CCDC102AQ96A19 550 aa12.19□□□□□ -0.46
FXR1-215ENST00000481383 USB1Q9BQ65 265 aaKnown RBP12.18□□□□□ -0.46
FXR1-215ENST00000481383 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
FXR1-215ENST00000481383 TRIM32Q13049 653 aa12.17□□□□□ -0.46
FXR1-215ENST00000481383 DXOO77932 396 aaKnown RBP12.16□□□□□ -0.46
FXR1-215ENST00000481383 WNT7AO00755 349 aa12.15□□□□□ -0.46
FXR1-215ENST00000481383 HOXA2O43364 376 aa12.15□□□□□ -0.46
FXR1-215ENST00000481383 GUCA2AQ02747 115 aa12.15□□□□□ -0.46
FXR1-215ENST00000481383 TTC24A2A3L6 582 aaPredicted RBP12.14□□□□□ -0.47
FXR1-215ENST00000481383 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
FXR1-215ENST00000481383 AXIN1O15169 862 aa12.14□□□□□ -0.47
FXR1-215ENST00000481383 USP46P62068 366 aa12.14□□□□□ -0.47
FXR1-215ENST00000481383 VSIG10Q8N0Z9 540 aa12.13□□□□□ -0.47
FXR1-215ENST00000481383 GMPR2Q9P2T1 348 aaKnown RBP12.13□□□□□ -0.47
FXR1-215ENST00000481383 SMPD1P17405 629 aa12.12□□□□□ -0.47
FXR1-215ENST00000481383 SMCPP49901 116 aaPredicted RBP12.11□□□□□ -0.47
FXR1-215ENST00000481383 CTC1Q2NKJ3 1217 aa12.11□□□□□ -0.47
FXR1-215ENST00000481383 MRGPRX2Q96LB1 330 aa12.11□□□□□ -0.47
FXR1-215ENST00000481383 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
FXR1-215ENST00000481383 FAM217BQ9NTX9 383 aaPredicted RBP12.11□□□□□ -0.47
FXR1-215ENST00000481383 LCE2AQ5TA79 106 aaPredicted RBP12.1□□□□□ -0.47
FXR1-215ENST00000481383 SNIP1Q8TAD8 396 aaKnown RBP12.1□□□□□ -0.47
FXR1-215ENST00000481383 SYMPKQ92797 1274 aaKnown RBP12.1□□□□□ -0.47
FXR1-215ENST00000481383 J3QL48 77 aa12.09□□□□□ -0.47
FXR1-215ENST00000481383 CCDC24Q8N4L8 307 aa12.09□□□□□ -0.47
FXR1-215ENST00000481383 CLCN1P35523 988 aa12.08□□□□□ -0.48
FXR1-215ENST00000481383 SKOR1P84550 965 aa12.07□□□□□ -0.48
FXR1-215ENST00000481383 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
FXR1-215ENST00000481383 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
FXR1-215ENST00000481383 C11orf95C9JLR9 678 aaPredicted RBP12.05□□□□□ -0.48
FXR1-215ENST00000481383 JUNDP17535 347 aa12.05□□□□□ -0.48
FXR1-215ENST00000481383 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.04□□□□□ -0.48
FXR1-215ENST00000481383 RC3H1Q5TC82 1133 aaKnown RBP12.03□□□□□ -0.48
FXR1-215ENST00000481383 NUTM1Q86Y26 1132 aa12.02□□□□□ -0.49
FXR1-215ENST00000481383 HPS1Q92902 700 aa12.02□□□□□ -0.49
FXR1-215ENST00000481383 PCDHGC3Q9UN70 934 aa12.02□□□□□ -0.49
FXR1-215ENST00000481383 WNT7BP56706 349 aa12.01□□□□□ -0.49
FXR1-215ENST00000481383 RETREG3Q86VR2 466 aa12.01□□□□□ -0.49
FXR1-215ENST00000481383 ATP13A2Q9NQ11 1180 aa12.01□□□□□ -0.49
FXR1-215ENST00000481383 KRI1Q8N9T8 703 aaKnown RBP12□□□□□ -0.49
FXR1-215ENST00000481383 FDX1P10109 184 aa11.99□□□□□ -0.49
FXR1-215ENST00000481383 PTCRAQ6ISU1 281 aaPredicted RBP11.99□□□□□ -0.49
FXR1-215ENST00000481383 NUDT12Q9BQG2 462 aa11.99□□□□□ -0.49
FXR1-215ENST00000481383 SNRPBP14678 240 aaKnown RBP11.97□□□□□ -0.49
FXR1-215ENST00000481383 SSTR3P32745 418 aaPredicted RBP11.96□□□□□ -0.49
FXR1-215ENST00000481383 C6orf229H3BNL8 230 aa11.95□□□□□ -0.5
FXR1-215ENST00000481383 WFS1O76024 890 aa11.95□□□□□ -0.5
FXR1-215ENST00000481383 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
FXR1-215ENST00000481383 NDUFV2P19404 249 aa11.94□□□□□ -0.5
FXR1-215ENST00000481383 NFX1Q12986 1120 aaKnown RBP11.94□□□□□ -0.5
FXR1-215ENST00000481383 ALDH1A1P00352 501 aa11.93□□□□□ -0.5
FXR1-215ENST00000481383 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
FXR1-215ENST00000481383 SIAH2O43255 324 aa11.92□□□□□ -0.5
FXR1-215ENST00000481383 MOXD2PA6NHM9 499 aa11.91□□□□□ -0.5
FXR1-215ENST00000481383 MS4A1P11836 297 aa11.91□□□□□ -0.5
FXR1-215ENST00000481383 BARGINQ6ZT62 677 aa11.91□□□□□ -0.5
FXR1-215ENST00000481383 CCNYL3P0C7X3 344 aa11.9□□□□□ -0.5
FXR1-215ENST00000481383 TTLL12Q14166 644 aaPredicted RBP11.9□□□□□ -0.5
FXR1-215ENST00000481383 LCE2CQ5TA81 110 aa11.9□□□□□ -0.5
FXR1-215ENST00000481383 EHBP1Q8NDI1 1231 aa11.9□□□□□ -0.5
FXR1-215ENST00000481383 ZMYND10O75800 440 aa11.89□□□□□ -0.51
FXR1-215ENST00000481383 SH3BP2P78314 561 aa11.89□□□□□ -0.51
FXR1-215ENST00000481383 AMHR2Q16671 573 aa11.89□□□□□ -0.51
FXR1-215ENST00000481383 SENP2Q9HC62 589 aa11.89□□□□□ -0.51
FXR1-215ENST00000481383 PTPRNQ16849 979 aa11.87□□□□□ -0.51
FXR1-215ENST00000481383 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
FXR1-215ENST00000481383 PRR7Q8TB68 274 aa11.86□□□□□ -0.51
FXR1-215ENST00000481383 ZC3H15Q8WU90 426 aaKnown RBP11.86□□□□□ -0.51
FXR1-215ENST00000481383 UNC93B1Q9H1C4 597 aa11.86□□□□□ -0.51
FXR1-215ENST00000481383 LINC01559Q495D7 138 aa11.85□□□□□ -0.51
FXR1-215ENST00000481383 EVA1BQ9NVM1 165 aa11.85□□□□□ -0.51
FXR1-215ENST00000481383 TERTO14746 1132 aaKnown RBP11.84□□□□□ -0.51
FXR1-215ENST00000481383 BEGAINQ9BUH8 593 aa11.84□□□□□ -0.51
FXR1-215ENST00000481383 BMP1P13497 986 aa11.83□□□□□ -0.52
FXR1-215ENST00000481383 MTMR2Q13614 643 aa11.83□□□□□ -0.52
FXR1-215ENST00000481383 BAP1Q92560 729 aa11.83□□□□□ -0.52
FXR1-215ENST00000481383 KIFC2Q96AC6 838 aa11.83□□□□□ -0.52
FXR1-215ENST00000481383 WIPF1O43516 503 aa11.82□□□□□ -0.52
FXR1-215ENST00000481383 KCNH2Q12809 1159 aa11.82□□□□□ -0.52
FXR1-215ENST00000481383 TRIM46Q7Z4K8 759 aa11.82□□□□□ -0.52
FXR1-215ENST00000481383 TLL2Q9Y6L7 1015 aa11.82□□□□□ -0.52
FXR1-215ENST00000481383 WASF2Q9Y6W5 498 aa11.82□□□□□ -0.52
FXR1-215ENST00000481383 CAPN5O15484 640 aaPredicted RBP11.8□□□□□ -0.52
FXR1-215ENST00000481383 TBC1D2Q9BYX2 928 aa11.8□□□□□ -0.52
FXR1-215ENST00000481383 DESI1Q6ICB0 168 aa11.79□□□□□ -0.52
FXR1-215ENST00000481383 PARP9Q8IXQ6 854 aa11.79□□□□□ -0.52
FXR1-215ENST00000481383 ZNF511Q8NB15 262 aa11.79□□□□□ -0.52
FXR1-215ENST00000481383 SPDYE5A6NIY4 337 aa11.78□□□□□ -0.52
FXR1-215ENST00000481383 RSBN1LQ6PCB5 846 aaPredicted RBP11.78□□□□□ -0.52
FXR1-215ENST00000481383 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
FXR1-215ENST00000481383 CFAP99D6REC4 459 aa11.75□□□□□ -0.53
FXR1-215ENST00000481383 GJA5P36382 358 aa11.75□□□□□ -0.53
FXR1-215ENST00000481383 TRIM66O15016 1216 aa11.74□□□□□ -0.53
FXR1-215ENST00000481383 LYPD8Q6UX82 237 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms