RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 EID1Q9Y6B2 187 aa30.7■■■□□ 2.51
TMED4-205ENST00000481238 SLIT1O75093 1534 aa30.69■■■□□ 2.5
TMED4-205ENST00000481238 SIRT1Q96EB6 747 aa30.69■■■□□ 2.5
TMED4-205ENST00000481238 BCANQ96GW7 911 aa30.69■■■□□ 2.5
TMED4-205ENST00000481238 ARHGAP23Q9P227 1491 aa30.69■■■□□ 2.5
TMED4-205ENST00000481238 CABP2Q9NPB3 220 aa30.69■■■□□ 2.5
TMED4-205ENST00000481238 MINK1Q8N4C8 1332 aaPredicted RBP30.68■■■□□ 2.5
TMED4-205ENST00000481238 ADAMTS13Q76LX8 1427 aa30.66■■■□□ 2.5
TMED4-205ENST00000481238 ADAMTSL3P82987 1691 aa30.65■■■□□ 2.5
TMED4-205ENST00000481238 NINLQ9Y2I6 1382 aa30.65■■■□□ 2.5
TMED4-205ENST00000481238 SRPK2P78362 688 aaKnown RBP30.64■■■□□ 2.5
TMED4-205ENST00000481238 RIMS1Q86UR5 1692 aaKnown RBP30.64■■■□□ 2.5
TMED4-205ENST00000481238 WAPLQ7Z5K2 1190 aa30.64■■■□□ 2.49
TMED4-205ENST00000481238 ATAD2Q6PL18 1390 aa30.63■■■□□ 2.49
TMED4-205ENST00000481238 TECPR2O15040 1411 aa30.62■■■□□ 2.49
TMED4-205ENST00000481238 PPP2R1AP30153 589 aa30.61■■■□□ 2.49
TMED4-205ENST00000481238 ANKRD36BQ8N2N9 1353 aa30.61■■■□□ 2.49
TMED4-205ENST00000481238 FAM135BQ49AJ0 1406 aa30.61■■■□□ 2.49
TMED4-205ENST00000481238 CDK19Q9BWU1 502 aa30.6■■■□□ 2.49
TMED4-205ENST00000481238 ZBED9Q6R2W3 1325 aa30.6■■■□□ 2.49
TMED4-205ENST00000481238 PLEKHH1Q9ULM0 1364 aa30.6■■■□□ 2.49
TMED4-205ENST00000481238 NSD3Q9BZ95 1437 aa30.59■■■□□ 2.49
TMED4-205ENST00000481238 MED14O60244 1454 aa30.59■■■□□ 2.49
TMED4-205ENST00000481238 KNDC1Q76NI1 1749 aa30.57■■■□□ 2.48
TMED4-205ENST00000481238 TBX22Q9Y458 520 aa30.55■■■□□ 2.48
TMED4-205ENST00000481238 CEP170BQ9Y4F5 1589 aaPredicted RBP30.54■■■□□ 2.48
TMED4-205ENST00000481238 CPS1P31327 1500 aa30.53■■■□□ 2.48
TMED4-205ENST00000481238 SLC26A8Q96RN1 970 aa30.51■■■□□ 2.47
TMED4-205ENST00000481238 INSRP06213 1382 aa30.51■■■□□ 2.47
TMED4-205ENST00000481238 CGNL1Q0VF96 1302 aa30.5■■■□□ 2.47
TMED4-205ENST00000481238 USP32Q8NFA0 1604 aa30.5■■■□□ 2.47
TMED4-205ENST00000481238 TERF2IPQ9NYB0 399 aa30.49■■■□□ 2.47
TMED4-205ENST00000481238 WASLO00401 505 aaPredicted RBP30.49■■■□□ 2.47
TMED4-205ENST00000481238 ROBO2Q9HCK4 1378 aa30.47■■■□□ 2.47
TMED4-205ENST00000481238 A0A1W2PP64 1363 aa30.47■■■□□ 2.47
TMED4-205ENST00000481238 MORC1Q86VD1 984 aa30.46■■■□□ 2.47
TMED4-205ENST00000481238 NSD2O96028 1365 aa30.45■■■□□ 2.47
TMED4-205ENST00000481238 PTPRUQ92729 1446 aa30.44■■■□□ 2.46
TMED4-205ENST00000481238 CABP1Q9NZU7 370 aa30.44■■■□□ 2.46
TMED4-205ENST00000481238 DIP2AQ14689 1571 aa30.44■■■□□ 2.46
TMED4-205ENST00000481238 CD163L1Q9NR16 1453 aa30.43■■■□□ 2.46
TMED4-205ENST00000481238 HDGFL2Q7Z4V5 671 aaPredicted RBP30.43■■■□□ 2.46
TMED4-205ENST00000481238 SETD1BQ9UPS6 1966 aaKnown RBP30.42■■■□□ 2.46
TMED4-205ENST00000481238 AMOTL2Q9Y2J4 779 aa30.41■■■□□ 2.46
TMED4-205ENST00000481238 ZNF142P52746 1687 aaPredicted RBP30.41■■■□□ 2.46
TMED4-205ENST00000481238 ANKLE2Q86XL3 938 aa30.41■■■□□ 2.46
TMED4-205ENST00000481238 BLMP54132 1417 aaPredicted RBP30.36■■■□□ 2.45
TMED4-205ENST00000481238 ATP7BP35670 1465 aa30.36■■■□□ 2.45
TMED4-205ENST00000481238 WDR43Q15061 677 aaKnown RBP eCLIP30.36■■■□□ 2.45
TMED4-205ENST00000481238 ADAMTS8Q9UP79 889 aa30.36■■■□□ 2.45
TMED4-205ENST00000481238 PIK3R4Q99570 1358 aa30.35■■■□□ 2.45
TMED4-205ENST00000481238 NUDT16Q96DE0 195 aaKnown RBP30.35■■■□□ 2.45
TMED4-205ENST00000481238 PTCH1Q13635 1447 aa30.34■■■□□ 2.45
TMED4-205ENST00000481238 CCDC61Q9Y6R9 512 aa30.33■■■□□ 2.45
TMED4-205ENST00000481238 POLR3AO14802 1390 aaPredicted RBP30.33■■■□□ 2.45
TMED4-205ENST00000481238 ADGRB2O60241 1585 aa30.32■■■□□ 2.45
TMED4-205ENST00000481238 PPIP5K1Q6PFW1 1433 aa30.31■■■□□ 2.44
TMED4-205ENST00000481238 FYB1O15117 783 aa30.31■■■□□ 2.44
TMED4-205ENST00000481238 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.31■■■□□ 2.44
TMED4-205ENST00000481238 TNNT2P45379 298 aaPredicted RBP30.28■■■□□ 2.44
TMED4-205ENST00000481238 CPSF1Q10570 1443 aaKnown RBP30.28■■■□□ 2.44
TMED4-205ENST00000481238 SMG6Q86US8 1419 aaKnown RBP30.26■■■□□ 2.44
TMED4-205ENST00000481238 GGNBP2Q9H3C7 697 aa30.26■■■□□ 2.44
TMED4-205ENST00000481238 PRR36Q9H6K5 1346 aa30.25■■■□□ 2.43
TMED4-205ENST00000481238 XRN1Q8IZH2 1706 aaKnown RBP30.25■■■□□ 2.43
TMED4-205ENST00000481238 SENP3-EIF4A1A0A087X0R7 540 aa30.24■■■□□ 2.43
TMED4-205ENST00000481238 MTHFSP49914 203 aa30.23■■■□□ 2.43
TMED4-205ENST00000481238 SUPT16HQ9Y5B9 1047 aaKnown RBP30.23■■■□□ 2.43
TMED4-205ENST00000481238 KCNA6P17658 529 aa30.22■■■□□ 2.43
TMED4-205ENST00000481238 ZNF692Q9BU19 519 aaPredicted RBP30.22■■■□□ 2.43
TMED4-205ENST00000481238 NUDCQ9Y266 331 aa30.22■■■□□ 2.43
TMED4-205ENST00000481238 NCKAP5LQ9HCH0 1330 aa30.21■■■□□ 2.43
TMED4-205ENST00000481238 PDE3BQ13370 1112 aa30.21■■■□□ 2.43
TMED4-205ENST00000481238 EDC4Q6P2E9 1401 aaKnown RBP30.21■■■□□ 2.43
TMED4-205ENST00000481238 NEFLP07196 543 aa30.2■■■□□ 2.43
TMED4-205ENST00000481238 CDC42BPGQ6DT37 1551 aa30.2■■■□□ 2.43
TMED4-205ENST00000481238 CFAP53Q96M91 514 aa30.2■■■□□ 2.42
TMED4-205ENST00000481238 PLEKHG3A1L390 1219 aa30.18■■■□□ 2.42
TMED4-205ENST00000481238 ANKRD26Q9UPS8 1709 aa30.18■■■□□ 2.42
TMED4-205ENST00000481238 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.17■■■□□ 2.42
TMED4-205ENST00000481238 SALL2Q9Y467 1007 aaPredicted RBP30.17■■■□□ 2.42
TMED4-205ENST00000481238 NPHP4O75161 1426 aaPredicted RBP30.16■■■□□ 2.42
TMED4-205ENST00000481238 FKBP8Q14318 412 aa30.16■■■□□ 2.42
TMED4-205ENST00000481238 KIF20BQ96Q89 1820 aa30.13■■■□□ 2.41
TMED4-205ENST00000481238 CHD2O14647 1828 aaKnown RBP30.12■■■□□ 2.41
TMED4-205ENST00000481238 TOPAZ1Q8N9V7 1692 aa30.11■■■□□ 2.41
TMED4-205ENST00000481238 NUTM2FA1L443 756 aa30.1■■■□□ 2.41
TMED4-205ENST00000481238 AKAP12Q02952 1782 aa30.1■■■□□ 2.41
TMED4-205ENST00000481238 MON2Q7Z3U7 1717 aa30.09■■■□□ 2.41
TMED4-205ENST00000481238 ACEP12821 1306 aa30.09■■■□□ 2.41
TMED4-205ENST00000481238 SHPRHQ149N8 1683 aa30.08■■■□□ 2.41
TMED4-205ENST00000481238 CCDC146Q8IYE0 955 aa30.08■■■□□ 2.41
TMED4-205ENST00000481238 NME9Q86XW9 330 aa30.06■■■□□ 2.4
TMED4-205ENST00000481238 NGEFQ8N5V2 710 aa30.06■■■□□ 2.4
TMED4-205ENST00000481238 ITSN1Q15811 1721 aa30.06■■■□□ 2.4
TMED4-205ENST00000481238 ANKARQ7Z5J8 1434 aa30.05■■■□□ 2.4
TMED4-205ENST00000481238 APAF1O14727 1248 aa30.03■■■□□ 2.4
TMED4-205ENST00000481238 NKTRP30414 1462 aaKnown RBP30.03■■■□□ 2.4
TMED4-205ENST00000481238 PNPLA6Q8IY17 1366 aa30.03■■■□□ 2.4
TMED4-205ENST00000481238 ZNF521Q96K83 1311 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms