RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-223ENST00000481173 GMPR2Q9P2T1 348 aaKnown RBP9.25□□□□□ -0.93
CCNL1-223ENST00000481173 KDM2AQ9Y2K7 1162 aa9.25□□□□□ -0.93
CCNL1-223ENST00000481173 HLA-CQ95604 372 aa9.24□□□□□ -0.93
CCNL1-223ENST00000481173 MDM2Q00987 491 aaPredicted RBP9.23□□□□□ -0.93
CCNL1-223ENST00000481173 MAP2K5Q13163 448 aa9.23□□□□□ -0.93
CCNL1-223ENST00000481173 Q3C1V9 767 aa9.23□□□□□ -0.93
CCNL1-223ENST00000481173 KDM4AO75164 1064 aa9.22□□□□□ -0.93
CCNL1-223ENST00000481173 MMP16P51512 607 aa9.22□□□□□ -0.93
CCNL1-223ENST00000481173 TRIM32Q13049 653 aa9.22□□□□□ -0.93
CCNL1-223ENST00000481173 TREML4Q6UXN2 200 aa9.21□□□□□ -0.94
CCNL1-223ENST00000481173 USB1Q9BQ65 265 aaKnown RBP9.21□□□□□ -0.94
CCNL1-223ENST00000481173 C11orf95C9JLR9 678 aaPredicted RBP9.2□□□□□ -0.94
CCNL1-223ENST00000481173 WNT7AO00755 349 aa9.2□□□□□ -0.94
CCNL1-223ENST00000481173 CTC1Q2NKJ3 1217 aa9.2□□□□□ -0.94
CCNL1-223ENST00000481173 IRF6O14896 467 aa9.19□□□□□ -0.94
CCNL1-223ENST00000481173 SMPD1P17405 629 aa9.19□□□□□ -0.94
CCNL1-223ENST00000481173 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
CCNL1-223ENST00000481173 CCDC24Q8N4L8 307 aa9.19□□□□□ -0.94
CCNL1-223ENST00000481173 MRGPRX2Q96LB1 330 aa9.19□□□□□ -0.94
CCNL1-223ENST00000481173 J3QL48 77 aa9.18□□□□□ -0.94
CCNL1-223ENST00000481173 DXOO77932 396 aaKnown RBP9.18□□□□□ -0.94
CCNL1-223ENST00000481173 SMCPP49901 116 aaPredicted RBP9.18□□□□□ -0.94
CCNL1-223ENST00000481173 GUCA2AQ02747 115 aa9.18□□□□□ -0.94
CCNL1-223ENST00000481173 SNIP1Q8TAD8 396 aaKnown RBP9.18□□□□□ -0.94
CCNL1-223ENST00000481173 HOXA2O43364 376 aa9.16□□□□□ -0.94
CCNL1-223ENST00000481173 CCDC102AQ96A19 550 aa9.16□□□□□ -0.94
CCNL1-223ENST00000481173 USP46P62068 366 aa9.15□□□□□ -0.94
CCNL1-223ENST00000481173 SYMPKQ92797 1274 aaKnown RBP9.15□□□□□ -0.94
CCNL1-223ENST00000481173 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
CCNL1-223ENST00000481173 SKOR1P84550 965 aa9.14□□□□□ -0.95
CCNL1-223ENST00000481173 TULP1O00294 542 aaPredicted RBP9.13□□□□□ -0.95
CCNL1-223ENST00000481173 WFS1O76024 890 aa9.13□□□□□ -0.95
CCNL1-223ENST00000481173 RC3H1Q5TC82 1133 aaKnown RBP9.13□□□□□ -0.95
CCNL1-223ENST00000481173 HPS1Q92902 700 aa9.13□□□□□ -0.95
CCNL1-223ENST00000481173 ATP13A2Q9NQ11 1180 aa9.13□□□□□ -0.95
CCNL1-223ENST00000481173 SNRPBP14678 240 aaKnown RBP9.12□□□□□ -0.95
CCNL1-223ENST00000481173 REPIN1Q9BWE0 567 aaKnown RBP9.11□□□□□ -0.95
CCNL1-223ENST00000481173 GPCPD1Q9NPB8 672 aa9.11□□□□□ -0.95
CCNL1-223ENST00000481173 JUNDP17535 347 aa9.1□□□□□ -0.95
CCNL1-223ENST00000481173 FAM217BQ9NTX9 383 aaPredicted RBP9.1□□□□□ -0.95
CCNL1-223ENST00000481173 CLCN1P35523 988 aa9.09□□□□□ -0.95
CCNL1-223ENST00000481173 NFX1Q12986 1120 aaKnown RBP9.09□□□□□ -0.95
CCNL1-223ENST00000481173 WNT7BP56706 349 aa9.08□□□□□ -0.96
CCNL1-223ENST00000481173 NUTM1Q86Y26 1132 aa9.08□□□□□ -0.96
CCNL1-223ENST00000481173 ALDH1A1P00352 501 aa9.07□□□□□ -0.96
CCNL1-223ENST00000481173 PTCRAQ6ISU1 281 aaPredicted RBP9.07□□□□□ -0.96
CCNL1-223ENST00000481173 KRI1Q8N9T8 703 aaKnown RBP9.07□□□□□ -0.96
CCNL1-223ENST00000481173 NUDT12Q9BQG2 462 aa9.07□□□□□ -0.96
CCNL1-223ENST00000481173 RETREG3Q86VR2 466 aa9.06□□□□□ -0.96
CCNL1-223ENST00000481173 TRIM47Q96LD4 638 aa9.06□□□□□ -0.96
CCNL1-223ENST00000481173 SENP2Q9HC62 589 aa9.05□□□□□ -0.96
CCNL1-223ENST00000481173 PCDHGC3Q9UN70 934 aa9.05□□□□□ -0.96
CCNL1-223ENST00000481173 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
CCNL1-223ENST00000481173 FDX1P10109 184 aa9.04□□□□□ -0.96
CCNL1-223ENST00000481173 LCE2CQ5TA81 110 aa9.04□□□□□ -0.96
CCNL1-223ENST00000481173 EHBP1Q8NDI1 1231 aa9.03□□□□□ -0.96
CCNL1-223ENST00000481173 TERTO14746 1132 aaKnown RBP9.02□□□□□ -0.97
CCNL1-223ENST00000481173 VSIG10Q8N0Z9 540 aa9.02□□□□□ -0.97
CCNL1-223ENST00000481173 SIAH2O43255 324 aa9.01□□□□□ -0.97
CCNL1-223ENST00000481173 NDUFV2P19404 249 aa9.01□□□□□ -0.97
CCNL1-223ENST00000481173 SSTR3P32745 418 aaPredicted RBP9.01□□□□□ -0.97
CCNL1-223ENST00000481173 WIPF1O43516 503 aa9□□□□□ -0.97
CCNL1-223ENST00000481173 MS4A1P11836 297 aa9□□□□□ -0.97
CCNL1-223ENST00000481173 BMP1P13497 986 aa9□□□□□ -0.97
CCNL1-223ENST00000481173 SH3BP2P78314 561 aa9□□□□□ -0.97
CCNL1-223ENST00000481173 SPIRE2Q8WWL2 714 aa9□□□□□ -0.97
CCNL1-223ENST00000481173 KIFC2Q96AC6 838 aa9□□□□□ -0.97
CCNL1-223ENST00000481173 CCNYL3P0C7X3 344 aa8.99□□□□□ -0.97
CCNL1-223ENST00000481173 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
CCNL1-223ENST00000481173 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
CCNL1-223ENST00000481173 WASF2Q9Y6W5 498 aa8.99□□□□□ -0.97
CCNL1-223ENST00000481173 MOXD2PA6NHM9 499 aa8.97□□□□□ -0.97
CCNL1-223ENST00000481173 INSM1Q01101 510 aaPredicted RBP8.97□□□□□ -0.97
CCNL1-223ENST00000481173 TTLL12Q14166 644 aaPredicted RBP8.97□□□□□ -0.97
CCNL1-223ENST00000481173 TRIM46Q7Z4K8 759 aa8.97□□□□□ -0.97
CCNL1-223ENST00000481173 UNC93B1Q9H1C4 597 aa8.97□□□□□ -0.97
CCNL1-223ENST00000481173 CAPN5O15484 640 aaPredicted RBP8.96□□□□□ -0.98
CCNL1-223ENST00000481173 BAP1Q92560 729 aa8.96□□□□□ -0.98
CCNL1-223ENST00000481173 STK17AQ9UEE5 414 aa8.96□□□□□ -0.98
CCNL1-223ENST00000481173 TLL2Q9Y6L7 1015 aa8.96□□□□□ -0.98
CCNL1-223ENST00000481173 PTPRNQ16849 979 aa8.95□□□□□ -0.98
CCNL1-223ENST00000481173 PRR7Q8TB68 274 aa8.95□□□□□ -0.98
CCNL1-223ENST00000481173 EVA1BQ9NVM1 165 aa8.94□□□□□ -0.98
CCNL1-223ENST00000481173 KCNH2Q12809 1159 aa8.93□□□□□ -0.98
CCNL1-223ENST00000481173 VEGFBP49765 207 aa8.92□□□□□ -0.98
CCNL1-223ENST00000481173 MTMR2Q13614 643 aa8.92□□□□□ -0.98
CCNL1-223ENST00000481173 GIGYF2Q6Y7W6 1299 aaKnown RBP8.92□□□□□ -0.98
CCNL1-223ENST00000481173 BARGINQ6ZT62 677 aa8.92□□□□□ -0.98
CCNL1-223ENST00000481173 ZNF511Q8NB15 262 aa8.91□□□□□ -0.98
CCNL1-223ENST00000481173 BEGAINQ9BUH8 593 aa8.91□□□□□ -0.98
CCNL1-223ENST00000481173 NXF1Q9UBU9 619 aaKnown RBP8.91□□□□□ -0.98
CCNL1-223ENST00000481173 AMHR2Q16671 573 aa8.9□□□□□ -0.98
CCNL1-223ENST00000481173 SLC16A10Q8TF71 515 aa8.9□□□□□ -0.98
CCNL1-223ENST00000481173 ZMYND10O75800 440 aa8.89□□□□□ -0.99
CCNL1-223ENST00000481173 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
CCNL1-223ENST00000481173 CTHP32929 405 aa8.88□□□□□ -0.99
CCNL1-223ENST00000481173 GMPRP36959 345 aa8.88□□□□□ -0.99
CCNL1-223ENST00000481173 NNTQ13423 1086 aa8.88□□□□□ -0.99
CCNL1-223ENST00000481173 ZFP42Q96MM3 310 aa8.88□□□□□ -0.99
CCNL1-223ENST00000481173 PCDHB15Q9Y5E8 787 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms