RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-213ENST00000480393 SRPK2P78362 688 aaKnown RBP37.56■■■■□ 3.6
TNFRSF25-213ENST00000480393 CARD14Q9BXL6 1004 aa37.56■■■■□ 3.6
TNFRSF25-213ENST00000480393 SLC12A5Q9H2X9 1139 aa37.56■■■■□ 3.6
TNFRSF25-213ENST00000480393 SLIT1O75093 1534 aa37.55■■■■□ 3.6
TNFRSF25-213ENST00000480393 TXNDC2Q86VQ3 553 aa37.53■■■■□ 3.6
TNFRSF25-213ENST00000480393 NSD3Q9BZ95 1437 aa37.53■■■■□ 3.6
TNFRSF25-213ENST00000480393 KNDC1Q76NI1 1749 aa37.53■■■■□ 3.6
TNFRSF25-213ENST00000480393 ZBED9Q6R2W3 1325 aa37.53■■■■□ 3.6
TNFRSF25-213ENST00000480393 NINLQ9Y2I6 1382 aa37.52■■■■□ 3.6
TNFRSF25-213ENST00000480393 ARHGAP23Q9P227 1491 aa37.52■■■■□ 3.6
TNFRSF25-213ENST00000480393 ATAD2Q6PL18 1390 aa37.52■■■■□ 3.6
TNFRSF25-213ENST00000480393 LTKP29376 864 aa37.5■■■■□ 3.59
TNFRSF25-213ENST00000480393 ADAMTSL3P82987 1691 aa37.5■■■■□ 3.59
TNFRSF25-213ENST00000480393 THEMISQ8N1K5 641 aaPredicted RBP37.5■■■■□ 3.59
TNFRSF25-213ENST00000480393 ADAMTS13Q76LX8 1427 aa37.48■■■■□ 3.59
TNFRSF25-213ENST00000480393 ANKRD36BQ8N2N9 1353 aa37.48■■■■□ 3.59
TNFRSF25-213ENST00000480393 PPP2R1AP30153 589 aa37.48■■■■□ 3.59
TNFRSF25-213ENST00000480393 WAPLQ7Z5K2 1190 aa37.47■■■■□ 3.59
TNFRSF25-213ENST00000480393 USP32Q8NFA0 1604 aa37.46■■■■□ 3.59
TNFRSF25-213ENST00000480393 PLEKHH1Q9ULM0 1364 aa37.46■■■■□ 3.59
TNFRSF25-213ENST00000480393 TECPR2O15040 1411 aa37.46■■■■□ 3.59
TNFRSF25-213ENST00000480393 CPS1P31327 1500 aa37.45■■■■□ 3.59
TNFRSF25-213ENST00000480393 CEP170BQ9Y4F5 1589 aaPredicted RBP37.45■■■■□ 3.59
TNFRSF25-213ENST00000480393 FAM135BQ49AJ0 1406 aa37.43■■■■□ 3.58
TNFRSF25-213ENST00000480393 CDK19Q9BWU1 502 aa37.42■■■■□ 3.58
TNFRSF25-213ENST00000480393 SIRT1Q96EB6 747 aa37.41■■■■□ 3.58
TNFRSF25-213ENST00000480393 CGNL1Q0VF96 1302 aa37.38■■■■□ 3.57
TNFRSF25-213ENST00000480393 MED14O60244 1454 aa37.37■■■■□ 3.57
TNFRSF25-213ENST00000480393 A0A1W2PP64 1363 aa37.34■■■■□ 3.57
TNFRSF25-213ENST00000480393 DIP2AQ14689 1571 aa37.34■■■■□ 3.57
TNFRSF25-213ENST00000480393 TERF2IPQ9NYB0 399 aa37.33■■■■□ 3.57
TNFRSF25-213ENST00000480393 ZNF142P52746 1687 aaPredicted RBP37.32■■■■□ 3.56
TNFRSF25-213ENST00000480393 SLC26A8Q96RN1 970 aa37.32■■■■□ 3.56
TNFRSF25-213ENST00000480393 NSD2O96028 1365 aa37.31■■■■□ 3.56
TNFRSF25-213ENST00000480393 INSRP06213 1382 aa37.31■■■■□ 3.56
TNFRSF25-213ENST00000480393 MORC1Q86VD1 984 aa37.31■■■■□ 3.56
TNFRSF25-213ENST00000480393 ROBO2Q9HCK4 1378 aa37.28■■■■□ 3.56
TNFRSF25-213ENST00000480393 WASLO00401 505 aaPredicted RBP37.27■■■■□ 3.56
TNFRSF25-213ENST00000480393 HDGFL2Q7Z4V5 671 aaPredicted RBP37.27■■■■□ 3.56
TNFRSF25-213ENST00000480393 TBX22Q9Y458 520 aa37.27■■■■□ 3.56
TNFRSF25-213ENST00000480393 WDR43Q15061 677 aaKnown RBP eCLIP37.26■■■■□ 3.56
TNFRSF25-213ENST00000480393 CD163L1Q9NR16 1453 aa37.25■■■■□ 3.55
TNFRSF25-213ENST00000480393 BLMP54132 1417 aaPredicted RBP37.25■■■■□ 3.55
TNFRSF25-213ENST00000480393 PTPRUQ92729 1446 aa37.23■■■■□ 3.55
TNFRSF25-213ENST00000480393 CABP1Q9NZU7 370 aa37.23■■■■□ 3.55
TNFRSF25-213ENST00000480393 ATP7BP35670 1465 aa37.22■■■■□ 3.55
TNFRSF25-213ENST00000480393 NEFLP07196 543 aa37.2■■■■□ 3.55
TNFRSF25-213ENST00000480393 ADGRB2O60241 1585 aa37.19■■■■□ 3.54
TNFRSF25-213ENST00000480393 SENP3-EIF4A1A0A087X0R7 540 aa37.17■■■■□ 3.54
TNFRSF25-213ENST00000480393 AMOTL2Q9Y2J4 779 aa37.17■■■■□ 3.54
TNFRSF25-213ENST00000480393 PTCH1Q13635 1447 aa37.16■■■■□ 3.54
TNFRSF25-213ENST00000480393 TNNT2P45379 298 aaPredicted RBP37.16■■■■□ 3.54
TNFRSF25-213ENST00000480393 ADAMTS8Q9UP79 889 aa37.15■■■■□ 3.54
TNFRSF25-213ENST00000480393 PPIP5K1Q6PFW1 1433 aa37.15■■■■□ 3.54
TNFRSF25-213ENST00000480393 ANKLE2Q86XL3 938 aa37.14■■■■□ 3.54
TNFRSF25-213ENST00000480393 SETD1BQ9UPS6 1966 aaKnown RBP37.13■■■■□ 3.53
TNFRSF25-213ENST00000480393 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.13■■■■□ 3.53
TNFRSF25-213ENST00000480393 POLR3AO14802 1390 aaPredicted RBP37.13■■■■□ 3.53
TNFRSF25-213ENST00000480393 SMG6Q86US8 1419 aaKnown RBP37.12■■■■□ 3.53
TNFRSF25-213ENST00000480393 NUDT16Q96DE0 195 aaKnown RBP37.12■■■■□ 3.53
TNFRSF25-213ENST00000480393 SUPT16HQ9Y5B9 1047 aaKnown RBP37.11■■■■□ 3.53
TNFRSF25-213ENST00000480393 ANKRD26Q9UPS8 1709 aa37.11■■■■□ 3.53
TNFRSF25-213ENST00000480393 XRN1Q8IZH2 1706 aaKnown RBP37.09■■■■□ 3.53
TNFRSF25-213ENST00000480393 PIK3R4Q99570 1358 aa37.09■■■■□ 3.53
TNFRSF25-213ENST00000480393 KIF20BQ96Q89 1820 aa37.08■■■■□ 3.53
TNFRSF25-213ENST00000480393 CDC42BPGQ6DT37 1551 aa37.06■■■■□ 3.52
TNFRSF25-213ENST00000480393 FKBP8Q14318 412 aa37.06■■■■□ 3.52
TNFRSF25-213ENST00000480393 GGNBP2Q9H3C7 697 aa37.06■■■■□ 3.52
TNFRSF25-213ENST00000480393 NUDCQ9Y266 331 aa37.06■■■■□ 3.52
TNFRSF25-213ENST00000480393 CCDC61Q9Y6R9 512 aa37.06■■■■□ 3.52
TNFRSF25-213ENST00000480393 FYB1O15117 783 aa37.04■■■■□ 3.52
TNFRSF25-213ENST00000480393 SALL2Q9Y467 1007 aaPredicted RBP37.04■■■■□ 3.52
TNFRSF25-213ENST00000480393 CPSF1Q10570 1443 aaKnown RBP37.03■■■■□ 3.52
TNFRSF25-213ENST00000480393 CFAP53Q96M91 514 aa37.03■■■■□ 3.52
TNFRSF25-213ENST00000480393 EDC4Q6P2E9 1401 aaKnown RBP37.01■■■■□ 3.51
TNFRSF25-213ENST00000480393 MTHFSP49914 203 aa37■■■■□ 3.51
TNFRSF25-213ENST00000480393 PRR36Q9H6K5 1346 aa37■■■■□ 3.51
TNFRSF25-213ENST00000480393 ITSN1Q15811 1721 aa37■■■■□ 3.51
TNFRSF25-213ENST00000480393 PDE3BQ13370 1112 aa36.98■■■■□ 3.51
TNFRSF25-213ENST00000480393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.97■■■■□ 3.51
TNFRSF25-213ENST00000480393 TOPAZ1Q8N9V7 1692 aa36.97■■■■□ 3.51
TNFRSF25-213ENST00000480393 NCKAP5LQ9HCH0 1330 aa36.96■■■■□ 3.51
TNFRSF25-213ENST00000480393 SHPRHQ149N8 1683 aa36.96■■■■□ 3.51
TNFRSF25-213ENST00000480393 MON2Q7Z3U7 1717 aa36.95■■■■□ 3.51
TNFRSF25-213ENST00000480393 AKAP12Q02952 1782 aa36.95■■■■□ 3.51
TNFRSF25-213ENST00000480393 KCNA6P17658 529 aa36.94■■■■□ 3.5
TNFRSF25-213ENST00000480393 NPHP4O75161 1426 aaPredicted RBP36.92■■■■□ 3.5
TNFRSF25-213ENST00000480393 ZNF692Q9BU19 519 aaPredicted RBP36.9■■■■□ 3.5
TNFRSF25-213ENST00000480393 CCDC146Q8IYE0 955 aa36.9■■■■□ 3.5
TNFRSF25-213ENST00000480393 NUTM2FA1L443 756 aa36.88■■■■□ 3.49
TNFRSF25-213ENST00000480393 CHD2O14647 1828 aaKnown RBP36.88■■■■□ 3.49
TNFRSF25-213ENST00000480393 PLEKHG3A1L390 1219 aa36.85■■■■□ 3.49
TNFRSF25-213ENST00000480393 NKTRP30414 1462 aaKnown RBP36.83■■■■□ 3.49
TNFRSF25-213ENST00000480393 NME9Q86XW9 330 aa36.82■■■■□ 3.48
TNFRSF25-213ENST00000480393 ACEP12821 1306 aa36.81■■■■□ 3.48
TNFRSF25-213ENST00000480393 NRKQ7Z2Y5 1582 aa36.79■■■■□ 3.48
TNFRSF25-213ENST00000480393 ANKARQ7Z5J8 1434 aa36.78■■■■□ 3.48
TNFRSF25-213ENST00000480393 APAF1O14727 1248 aa36.78■■■■□ 3.48
TNFRSF25-213ENST00000480393 COG3Q96JB2 828 aa36.77■■■■□ 3.48
TNFRSF25-213ENST00000480393 COL3A1P02461 1466 aaPredicted RBP36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms