RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 TULP4Q9NRJ4 1543 aa22.45■■□□□ 1.18
PKD1-213ENST00000480227 TRMT2AQ8IZ69 625 aaKnown RBP22.44■■□□□ 1.18
PKD1-213ENST00000480227 IPO9Q96P70 1041 aaKnown RBP22.43■■□□□ 1.18
PKD1-213ENST00000480227 RIMBP3CA6NJZ7 1639 aa22.43■■□□□ 1.18
PKD1-213ENST00000480227 RIMBP3BA6NNM3 1639 aa22.43■■□□□ 1.18
PKD1-213ENST00000480227 RIMBP3Q9UFD9 1639 aa22.43■■□□□ 1.18
PKD1-213ENST00000480227 SHPRHQ149N8 1683 aa22.43■■□□□ 1.18
PKD1-213ENST00000480227 CABP2Q9NPB3 220 aa22.42■■□□□ 1.18
PKD1-213ENST00000480227 STK26Q9P289 416 aa22.42■■□□□ 1.18
PKD1-213ENST00000480227 PREX1Q8TCU6 1659 aa22.42■■□□□ 1.18
PKD1-213ENST00000480227 EVC2Q86UK5 1308 aa22.41■■□□□ 1.18
PKD1-213ENST00000480227 PDE4AP27815 886 aa22.41■■□□□ 1.18
PKD1-213ENST00000480227 NPM2Q86SE8 214 aaKnown RBP22.41■■□□□ 1.18
PKD1-213ENST00000480227 SLC52A1Q9NWF4 448 aa22.4■■□□□ 1.18
PKD1-213ENST00000480227 FBXO31Q5XUX0 539 aaPredicted RBP22.4■■□□□ 1.18
PKD1-213ENST00000480227 TSPOAP1O95153 1857 aa22.39■■□□□ 1.18
PKD1-213ENST00000480227 NKTRP30414 1462 aaKnown RBP22.39■■□□□ 1.17
PKD1-213ENST00000480227 CGNL1Q0VF96 1302 aa22.39■■□□□ 1.17
PKD1-213ENST00000480227 TMEM131LA2VDJ0 1609 aa22.38■■□□□ 1.17
PKD1-213ENST00000480227 USP32Q8NFA0 1604 aa22.38■■□□□ 1.17
PKD1-213ENST00000480227 FAM69CQ0P6D2 419 aa22.38■■□□□ 1.17
PKD1-213ENST00000480227 E9PSI1 815 aa22.37■■□□□ 1.17
PKD1-213ENST00000480227 MTHFSP49914 203 aa22.37■■□□□ 1.17
PKD1-213ENST00000480227 BCAR3O75815 825 aa22.36■■□□□ 1.17
PKD1-213ENST00000480227 NEUROD2Q15784 382 aa22.36■■□□□ 1.17
PKD1-213ENST00000480227 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.36■■□□□ 1.17
PKD1-213ENST00000480227 MS4A1P11836 297 aa22.36■■□□□ 1.17
PKD1-213ENST00000480227 BACH2Q9BYV9 841 aa22.36■■□□□ 1.17
PKD1-213ENST00000480227 ZBTB47Q9UFB7 747 aaPredicted RBP22.36■■□□□ 1.17
PKD1-213ENST00000480227 RRP7AQ9Y3A4 280 aaKnown RBP22.36■■□□□ 1.17
PKD1-213ENST00000480227 WWC1Q8IX03 1113 aa22.35■■□□□ 1.17
PKD1-213ENST00000480227 ANKRD36BQ8N2N9 1353 aa22.35■■□□□ 1.17
PKD1-213ENST00000480227 ZFYVE9O95405 1425 aa22.35■■□□□ 1.17
PKD1-213ENST00000480227 KDM2BQ8NHM5 1336 aa22.33■■□□□ 1.16
PKD1-213ENST00000480227 SRPK2P78362 688 aaKnown RBP22.32■■□□□ 1.16
PKD1-213ENST00000480227 NBR1Q14596 966 aa22.32■■□□□ 1.16
PKD1-213ENST00000480227 PUS7Q96PZ0 661 aaKnown RBP22.32■■□□□ 1.16
PKD1-213ENST00000480227 MINK1Q8N4C8 1332 aaPredicted RBP22.31■■□□□ 1.16
PKD1-213ENST00000480227 RUNDC1Q96C34 613 aa22.31■■□□□ 1.16
PKD1-213ENST00000480227 A0A1W2PP64 1363 aa22.3■■□□□ 1.16
PKD1-213ENST00000480227 TCP11L2Q8N4U5 519 aa22.3■■□□□ 1.16
PKD1-213ENST00000480227 NGEFQ8N5V2 710 aa22.3■■□□□ 1.16
PKD1-213ENST00000480227 DIP2BQ9P265 1576 aa22.3■■□□□ 1.16
PKD1-213ENST00000480227 PTPRMP28827 1452 aa22.3■■□□□ 1.16
PKD1-213ENST00000480227 PRAM1Q96QH2 718 aa22.3■■□□□ 1.16
PKD1-213ENST00000480227 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
PKD1-213ENST00000480227 CENPQQ7L2Z9 268 aaPredicted RBP22.28■■□□□ 1.16
PKD1-213ENST00000480227 CFAP53Q96M91 514 aa22.27■■□□□ 1.16
PKD1-213ENST00000480227 YTHDC2Q9H6S0 1430 aaKnown RBP22.27■■□□□ 1.16
PKD1-213ENST00000480227 STAG3Q9UJ98 1225 aa22.26■■□□□ 1.15
PKD1-213ENST00000480227 POGKQ9P215 609 aa22.26■■□□□ 1.15
PKD1-213ENST00000480227 NSD2O96028 1365 aa22.26■■□□□ 1.15
PKD1-213ENST00000480227 GGNBP2Q9H3C7 697 aa22.25■■□□□ 1.15
PKD1-213ENST00000480227 ABCC11Q96J66 1382 aa22.24■■□□□ 1.15
PKD1-213ENST00000480227 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
PKD1-213ENST00000480227 CLTCQ00610 1675 aaKnown RBP22.23■■□□□ 1.15
PKD1-213ENST00000480227 U2AF1L5P0DN76 240 aaPredicted RBP22.23■■□□□ 1.15
PKD1-213ENST00000480227 U2AF1Q01081 240 aaKnown RBP eCLIP22.23■■□□□ 1.15
PKD1-213ENST00000480227 MLECQ14165 292 aa22.22■■□□□ 1.15
PKD1-213ENST00000480227 PHF23Q9BUL5 403 aaPredicted RBP22.22■■□□□ 1.15
PKD1-213ENST00000480227 NINLQ9Y2I6 1382 aa22.2■■□□□ 1.14
PKD1-213ENST00000480227 CD163L1Q9NR16 1453 aa22.2■■□□□ 1.14
PKD1-213ENST00000480227 CANXP27824 592 aaKnown RBP22.19■■□□□ 1.14
PKD1-213ENST00000480227 ATAD2Q6PL18 1390 aa22.19■■□□□ 1.14
PKD1-213ENST00000480227 PANK1Q8TE04 598 aa22.19■■□□□ 1.14
PKD1-213ENST00000480227 FYB1O15117 783 aa22.18■■□□□ 1.14
PKD1-213ENST00000480227 FRAT1Q92837 279 aaPredicted RBP22.18■■□□□ 1.14
PKD1-213ENST00000480227 RGS3P49796 1198 aa22.17■■□□□ 1.14
PKD1-213ENST00000480227 CDK19Q9BWU1 502 aa22.17■■□□□ 1.14
PKD1-213ENST00000480227 TERF2IPQ9NYB0 399 aa22.17■■□□□ 1.14
PKD1-213ENST00000480227 WDR63Q8IWG1 891 aa22.17■■□□□ 1.14
PKD1-213ENST00000480227 DNAJC5Q9H3Z4 198 aa22.17■■□□□ 1.14
PKD1-213ENST00000480227 COG6Q9Y2V7 657 aa22.17■■□□□ 1.14
PKD1-213ENST00000480227 U2SURPO15042 1029 aaKnown RBP22.16■■□□□ 1.14
PKD1-213ENST00000480227 BCL2L13Q9BXK5 485 aa22.16■■□□□ 1.14
PKD1-213ENST00000480227 RARSP54136 660 aaKnown RBP22.15■■□□□ 1.14
PKD1-213ENST00000480227 PDE3AQ14432 1141 aa22.15■■□□□ 1.14
PKD1-213ENST00000480227 REREQ9P2R6 1566 aa22.15■■□□□ 1.14
PKD1-213ENST00000480227 AGLP35573 1532 aa22.15■■□□□ 1.14
PKD1-213ENST00000480227 ANKRD26Q9UPS8 1709 aa22.15■■□□□ 1.14
PKD1-213ENST00000480227 CCDC27Q2M243 656 aa22.14■■□□□ 1.14
PKD1-213ENST00000480227 WAPLQ7Z5K2 1190 aa22.14■■□□□ 1.14
PKD1-213ENST00000480227 CABP1Q9NZU7 370 aa22.14■■□□□ 1.14
PKD1-213ENST00000480227 A2ML1A8K2U0 1454 aa22.14■■□□□ 1.14
PKD1-213ENST00000480227 ARHGEF40Q8TER5 1519 aa22.14■■□□□ 1.13
PKD1-213ENST00000480227 NLRP1Q9C000 1473 aa22.14■■□□□ 1.13
PKD1-213ENST00000480227 IGHDP01880 384 aa22.13■■□□□ 1.13
PKD1-213ENST00000480227 ADGRB2O60241 1585 aa22.13■■□□□ 1.13
PKD1-213ENST00000480227 TNNQ9UQP3 1299 aa22.13■■□□□ 1.13
PKD1-213ENST00000480227 COL3A1P02461 1466 aaPredicted RBP22.12■■□□□ 1.13
PKD1-213ENST00000480227 SPATA31D1Q6ZQQ2 1576 aa22.11■■□□□ 1.13
PKD1-213ENST00000480227 RIMS2Q9UQ26 1411 aa22.11■■□□□ 1.13
PKD1-213ENST00000480227 HDGFL2Q7Z4V5 671 aaPredicted RBP22.11■■□□□ 1.13
PKD1-213ENST00000480227 DEKP35659 375 aaKnown RBP22.1■■□□□ 1.13
PKD1-213ENST00000480227 FAM161AQ3B820 660 aa22.1■■□□□ 1.13
PKD1-213ENST00000480227 LAS1LQ9Y4W2 734 aaKnown RBP22.1■■□□□ 1.13
PKD1-213ENST00000480227 SETD1AO15047 1707 aaKnown RBP22.1■■□□□ 1.13
PKD1-213ENST00000480227 PLEKHF1Q96S99 279 aa22.1■■□□□ 1.13
PKD1-213ENST00000480227 PPP6R1Q9UPN7 881 aa22.1■■□□□ 1.13
PKD1-213ENST00000480227 C8orf34Q49A92 452 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms