RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 BECN2A8MW95 431 aa10.81□□□□□ -0.68
TTC3-216ENST00000479930 ZNF592Q92610 1267 aa10.81□□□□□ -0.68
TTC3-216ENST00000479930 ERC1Q8IUD2 1116 aa10.81□□□□□ -0.68
TTC3-216ENST00000479930 C9orf78Q9NZ63 289 aaPredicted RBP10.8□□□□□ -0.68
TTC3-216ENST00000479930 HOOK1Q9UJC3 728 aaKnown RBP10.8□□□□□ -0.68
TTC3-216ENST00000479930 PDE4AP27815 886 aa10.8□□□□□ -0.68
TTC3-216ENST00000479930 SOGA3Q5TF21 947 aa10.8□□□□□ -0.68
TTC3-216ENST00000479930 CAGE1Q8TC20 777 aa10.8□□□□□ -0.68
TTC3-216ENST00000479930 CCDC175P0C221 793 aa10.8□□□□□ -0.68
TTC3-216ENST00000479930 NEUROD6Q96NK8 337 aa10.8□□□□□ -0.68
TTC3-216ENST00000479930 PRPF31Q8WWY3 499 aaKnown RBP10.8□□□□□ -0.68
TTC3-216ENST00000479930 SLU7O95391 586 aaKnown RBP10.79□□□□□ -0.68
TTC3-216ENST00000479930 KIF6Q6ZMV9 814 aa10.79□□□□□ -0.68
TTC3-216ENST00000479930 GBP2P32456 591 aaPredicted RBP10.79□□□□□ -0.68
TTC3-216ENST00000479930 ZNHIT6Q9NWK9 470 aaKnown RBP10.79□□□□□ -0.68
TTC3-216ENST00000479930 SLC3A2P08195 630 aaKnown RBP10.79□□□□□ -0.68
TTC3-216ENST00000479930 GZF1Q9H116 711 aaPredicted RBP10.79□□□□□ -0.68
TTC3-216ENST00000479930 SAFBQ15424 915 aaKnown RBP eCLIP10.78□□□□□ -0.68
TTC3-216ENST00000479930 CLGNO14967 610 aa10.78□□□□□ -0.68
TTC3-216ENST00000479930 EPB41L2O43491 1005 aaKnown RBP10.78□□□□□ -0.68
TTC3-216ENST00000479930 AIMP1Q12904 312 aaKnown RBP10.78□□□□□ -0.68
TTC3-216ENST00000479930 GTF3C6Q969F1 213 aa10.77□□□□□ -0.68
TTC3-216ENST00000479930 CYB5RLQ6IPT4 315 aa10.77□□□□□ -0.69
TTC3-216ENST00000479930 STAMBPO95630 424 aa10.77□□□□□ -0.69
TTC3-216ENST00000479930 SPOUT1Q5T280 376 aaKnown RBP10.77□□□□□ -0.69
TTC3-216ENST00000479930 PPP4R4Q6NUP7 873 aa10.77□□□□□ -0.69
TTC3-216ENST00000479930 NLRP2Q9NX02 1062 aa10.77□□□□□ -0.69
TTC3-216ENST00000479930 BCL11BQ9C0K0 894 aaPredicted RBP10.77□□□□□ -0.69
TTC3-216ENST00000479930 DCTN1Q14203 1278 aa10.76□□□□□ -0.69
TTC3-216ENST00000479930 NOP9Q86U38 636 aaKnown RBP10.76□□□□□ -0.69
TTC3-216ENST00000479930 CLASRPQ8N2M8 674 aaKnown RBP10.76□□□□□ -0.69
TTC3-216ENST00000479930 ACRBPQ8NEB7 543 aa10.76□□□□□ -0.69
TTC3-216ENST00000479930 TMF1P82094 1093 aa10.76□□□□□ -0.69
TTC3-216ENST00000479930 BCL2L13Q9BXK5 485 aa10.76□□□□□ -0.69
TTC3-216ENST00000479930 CHMP5Q9NZZ3 219 aa10.76□□□□□ -0.69
TTC3-216ENST00000479930 RIOK3O14730 519 aaKnown RBP10.76□□□□□ -0.69
TTC3-216ENST00000479930 ZNF408Q9H9D4 720 aa10.76□□□□□ -0.69
TTC3-216ENST00000479930 FERMT2Q96AC1 680 aa10.76□□□□□ -0.69
TTC3-216ENST00000479930 RAPGEF4Q8WZA2 1011 aa10.75□□□□□ -0.69
TTC3-216ENST00000479930 PHF14O94880 888 aa10.75□□□□□ -0.69
TTC3-216ENST00000479930 USP5P45974 858 aa10.75□□□□□ -0.69
TTC3-216ENST00000479930 TANGO6Q9C0B7 1094 aa10.75□□□□□ -0.69
TTC3-216ENST00000479930 ANO2Q9NQ90 1003 aa10.75□□□□□ -0.69
TTC3-216ENST00000479930 TAX1BP1Q86VP1 789 aa10.75□□□□□ -0.69
TTC3-216ENST00000479930 CCDC89Q8N998 374 aa10.75□□□□□ -0.69
TTC3-216ENST00000479930 KMT5BQ4FZB7 885 aa10.74□□□□□ -0.69
TTC3-216ENST00000479930 CCDC117Q8IWD4 279 aaPredicted RBP10.74□□□□□ -0.69
TTC3-216ENST00000479930 XBP1P17861 261 aa10.74□□□□□ -0.69
TTC3-216ENST00000479930 CEP63Q96MT8 703 aa10.74□□□□□ -0.69
TTC3-216ENST00000479930 ATP2B1P20020 1258 aa10.74□□□□□ -0.69
TTC3-216ENST00000479930 TRMT1LQ7Z2T5 733 aaKnown RBP10.74□□□□□ -0.69
TTC3-216ENST00000479930 CCDC146Q8IYE0 955 aa10.74□□□□□ -0.69
TTC3-216ENST00000479930 DZIP1Q86YF9 867 aaKnown RBP10.74□□□□□ -0.69
TTC3-216ENST00000479930 SEPT6Q14141 434 aa10.74□□□□□ -0.69
TTC3-216ENST00000479930 RIC3Q7Z5B4 369 aa10.73□□□□□ -0.69
TTC3-216ENST00000479930 MAGEC2Q9UBF1 373 aaPredicted RBP10.73□□□□□ -0.69
TTC3-216ENST00000479930 TNIP1Q15025 636 aa10.73□□□□□ -0.69
TTC3-216ENST00000479930 RNF187Q5TA31 235 aaPredicted RBP10.73□□□□□ -0.69
TTC3-216ENST00000479930 IFIT2P09913 472 aaKnown RBP10.73□□□□□ -0.69
TTC3-216ENST00000479930 SKIV2LQ15477 1246 aaKnown RBP10.73□□□□□ -0.69
TTC3-216ENST00000479930 ZBTB33Q86T24 672 aa10.73□□□□□ -0.69
TTC3-216ENST00000479930 SSBP05455 408 aaKnown RBP eCLIP10.73□□□□□ -0.69
TTC3-216ENST00000479930 NUTM2GQ5VZR2 741 aa10.72□□□□□ -0.69
TTC3-216ENST00000479930 AIDAQ96BJ3 306 aa10.72□□□□□ -0.69
TTC3-216ENST00000479930 SMC1AQ14683 1233 aaKnown RBP10.72□□□□□ -0.69
TTC3-216ENST00000479930 RWDD1Q9H446 243 aaPredicted RBP10.72□□□□□ -0.69
TTC3-216ENST00000479930 PPM1EQ8WY54 764 aa10.72□□□□□ -0.69
TTC3-216ENST00000479930 GBP4Q96PP9 640 aa10.72□□□□□ -0.69
TTC3-216ENST00000479930 TRIM22Q8IYM9 498 aa10.72□□□□□ -0.69
TTC3-216ENST00000479930 XRCC6P12956 609 aaKnown RBP eCLIP10.72□□□□□ -0.69
TTC3-216ENST00000479930 DDX54Q8TDD1 881 aaKnown RBP10.72□□□□□ -0.69
TTC3-216ENST00000479930 DDX58O95786 925 aaKnown RBP10.72□□□□□ -0.69
TTC3-216ENST00000479930 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
TTC3-216ENST00000479930 CRACR2BQ8N4Y2 399 aaPredicted RBP10.72□□□□□ -0.69
TTC3-216ENST00000479930 SIRT1Q96EB6 747 aa10.71□□□□□ -0.69
TTC3-216ENST00000479930 TRIM5Q9C035 493 aa10.71□□□□□ -0.69
TTC3-216ENST00000479930 OTUD6BQ8N6M0 293 aa10.71□□□□□ -0.69
TTC3-216ENST00000479930 ATP2C2O75185 946 aa10.71□□□□□ -0.7
TTC3-216ENST00000479930 BRPF1P55201 1214 aaPredicted RBP10.71□□□□□ -0.7
TTC3-216ENST00000479930 CNNM1Q9NRU3 951 aa10.71□□□□□ -0.7
TTC3-216ENST00000479930 POTEJP0CG39 1038 aa10.71□□□□□ -0.7
TTC3-216ENST00000479930 KIF3BO15066 747 aa10.7□□□□□ -0.7
TTC3-216ENST00000479930 ERLIN2O94905 339 aa10.7□□□□□ -0.7
TTC3-216ENST00000479930 ATP2B3Q16720 1220 aa10.7□□□□□ -0.7
TTC3-216ENST00000479930 RAB3IL1Q8TBN0 382 aa10.7□□□□□ -0.7
TTC3-216ENST00000479930 CSPG5O95196 566 aa10.7□□□□□ -0.7
TTC3-216ENST00000479930 RALYLQ86SE5 291 aaKnown RBP10.7□□□□□ -0.7
TTC3-216ENST00000479930 CAPN15O75808 1086 aa10.7□□□□□ -0.7
TTC3-216ENST00000479930 GNL3LQ9NVN8 582 aaKnown RBP10.7□□□□□ -0.7
TTC3-216ENST00000479930 G3BP1Q13283 466 aaKnown RBP eCLIP10.69□□□□□ -0.7
TTC3-216ENST00000479930 DCAF11Q8TEB1 546 aa10.69□□□□□ -0.7
TTC3-216ENST00000479930 TBC1D2BQ9UPU7 963 aa10.69□□□□□ -0.7
TTC3-216ENST00000479930 ITM2BQ9Y287 266 aa10.69□□□□□ -0.7
TTC3-216ENST00000479930 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
TTC3-216ENST00000479930 KIF20AO95235 890 aa10.69□□□□□ -0.7
TTC3-216ENST00000479930 CCDC150Q8NCX0 1101 aa10.69□□□□□ -0.7
TTC3-216ENST00000479930 ZNF622Q969S3 477 aaKnown RBP eCLIP10.69□□□□□ -0.79e-7■■□□□ 12.6
TTC3-216ENST00000479930 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
TTC3-216ENST00000479930 NUCB2P80303 420 aa10.68□□□□□ -0.7
TTC3-216ENST00000479930 PIBF1Q8WXW3 757 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms