RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 ARHGAP5Q13017 1502 aa16.43■□□□□ 0.22
LYSMD4-206ENST00000479791 KANK1Q14678 1352 aa16.43■□□□□ 0.22
LYSMD4-206ENST00000479791 VSIG10Q8N0Z9 540 aa16.43■□□□□ 0.22
LYSMD4-206ENST00000479791 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
LYSMD4-206ENST00000479791 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
LYSMD4-206ENST00000479791 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
LYSMD4-206ENST00000479791 NCOA3Q9Y6Q9 1424 aa16.42■□□□□ 0.22
LYSMD4-206ENST00000479791 TRPM2O94759 1503 aa16.42■□□□□ 0.22
LYSMD4-206ENST00000479791 CARD14Q9BXL6 1004 aa16.42■□□□□ 0.22
LYSMD4-206ENST00000479791 ZMYND15Q9H091 742 aa16.42■□□□□ 0.22
LYSMD4-206ENST00000479791 IQSEC2Q5JU85 1478 aa16.41■□□□□ 0.22
LYSMD4-206ENST00000479791 HSCBQ8IWL3 235 aa16.41■□□□□ 0.22
LYSMD4-206ENST00000479791 DDIT3P35638 169 aa16.41■□□□□ 0.22
LYSMD4-206ENST00000479791 ERCC6Q03468 1493 aa16.41■□□□□ 0.22
LYSMD4-206ENST00000479791 MVPQ14764 893 aaKnown RBP16.4■□□□□ 0.22
LYSMD4-206ENST00000479791 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
LYSMD4-206ENST00000479791 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
LYSMD4-206ENST00000479791 ERVK-7P63135 1459 aa16.4■□□□□ 0.22
LYSMD4-206ENST00000479791 MFAP1P55081 439 aaKnown RBP16.4■□□□□ 0.22
LYSMD4-206ENST00000479791 TNNQ9UQP3 1299 aa16.4■□□□□ 0.22
LYSMD4-206ENST00000479791 FBLN2P98095 1184 aa16.39■□□□□ 0.21
LYSMD4-206ENST00000479791 SHPRHQ149N8 1683 aa16.39■□□□□ 0.21
LYSMD4-206ENST00000479791 TRIM44Q96DX7 344 aaPredicted RBP16.39■□□□□ 0.21
LYSMD4-206ENST00000479791 PTPRTO14522 1441 aa16.38■□□□□ 0.21
LYSMD4-206ENST00000479791 ERBB4Q15303 1308 aa16.38■□□□□ 0.21
LYSMD4-206ENST00000479791 TCP11L2Q8N4U5 519 aa16.38■□□□□ 0.21
LYSMD4-206ENST00000479791 SNX21Q969T3 373 aa16.38■□□□□ 0.21
LYSMD4-206ENST00000479791 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
LYSMD4-206ENST00000479791 TPM2P07951 284 aa16.37■□□□□ 0.21
LYSMD4-206ENST00000479791 PTMSP20962 102 aa16.37■□□□□ 0.21
LYSMD4-206ENST00000479791 HDAC1Q13547 482 aaPredicted RBP16.37■□□□□ 0.21
LYSMD4-206ENST00000479791 SKOR2Q2VWA4 1001 aaPredicted RBP16.37■□□□□ 0.21
LYSMD4-206ENST00000479791 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.36■□□□□ 0.21
LYSMD4-206ENST00000479791 RBM25P49756 843 aaKnown RBP16.36■□□□□ 0.21
LYSMD4-206ENST00000479791 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
LYSMD4-206ENST00000479791 ZKSCAN2Q63HK3 967 aa16.36■□□□□ 0.21
LYSMD4-206ENST00000479791 BCL2L13Q9BXK5 485 aa16.36■□□□□ 0.21
LYSMD4-206ENST00000479791 SMC5Q8IY18 1101 aa16.35■□□□□ 0.21
LYSMD4-206ENST00000479791 CT47B1P0C2W7 299 aaPredicted RBP16.35■□□□□ 0.21
LYSMD4-206ENST00000479791 DZIP1LQ8IYY4 767 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-206ENST00000479791 GBP4Q96PP9 640 aa16.35■□□□□ 0.21
LYSMD4-206ENST00000479791 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
LYSMD4-206ENST00000479791 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
LYSMD4-206ENST00000479791 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
LYSMD4-206ENST00000479791 SHROOM2Q13796 1616 aa16.34■□□□□ 0.21
LYSMD4-206ENST00000479791 SBNO2Q9Y2G9 1366 aa16.34■□□□□ 0.21
LYSMD4-206ENST00000479791 FTSJ3Q8IY81 847 aaKnown RBP16.33■□□□□ 0.21
LYSMD4-206ENST00000479791 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.21
LYSMD4-206ENST00000479791 RAB3GAP1Q15042 981 aa16.32■□□□□ 0.2
LYSMD4-206ENST00000479791 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
LYSMD4-206ENST00000479791 GAS2L3Q86XJ1 694 aa16.32■□□□□ 0.2
LYSMD4-206ENST00000479791 PDCL3Q9H2J4 239 aa16.31■□□□□ 0.2
LYSMD4-206ENST00000479791 DDX19BQ9UMR2 479 aa16.3■□□□□ 0.2
LYSMD4-206ENST00000479791 MYOM2P54296 1465 aa16.3■□□□□ 0.2
LYSMD4-206ENST00000479791 MYO3AQ8NEV4 1616 aa16.3■□□□□ 0.2
LYSMD4-206ENST00000479791 CCDC173Q0VFZ6 552 aa16.29■□□□□ 0.2
LYSMD4-206ENST00000479791 PPP1R9BQ96SB3 815 aa16.29■□□□□ 0.2
LYSMD4-206ENST00000479791 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
LYSMD4-206ENST00000479791 MAP3K4Q9Y6R4 1608 aa16.29■□□□□ 0.2
LYSMD4-206ENST00000479791 ADGRL1O94910 1474 aa16.29■□□□□ 0.2
LYSMD4-206ENST00000479791 NSD3Q9BZ95 1437 aa16.28■□□□□ 0.2
LYSMD4-206ENST00000479791 CFAP70Q5T0N1 1121 aa16.28■□□□□ 0.2
LYSMD4-206ENST00000479791 CFAP53Q96M91 514 aa16.27■□□□□ 0.2
LYSMD4-206ENST00000479791 IBTKQ9P2D0 1353 aaPredicted RBP16.27■□□□□ 0.2
LYSMD4-206ENST00000479791 HSP90AB1P08238 724 aaKnown RBP16.27■□□□□ 0.2
LYSMD4-206ENST00000479791 ABCA6Q8N139 1617 aa16.27■□□□□ 0.19
LYSMD4-206ENST00000479791 TRIM27P14373 513 aa16.26■□□□□ 0.19
LYSMD4-206ENST00000479791 TET3O43151 1660 aa16.26■□□□□ 0.19
LYSMD4-206ENST00000479791 TERF1P54274 439 aa16.26■□□□□ 0.19
LYSMD4-206ENST00000479791 USP32Q8NFA0 1604 aa16.25■□□□□ 0.19
LYSMD4-206ENST00000479791 CLEC17AQ6ZS10 378 aa16.25■□□□□ 0.19
LYSMD4-206ENST00000479791 ZSCAN30Q86W11 494 aa16.25■□□□□ 0.19
LYSMD4-206ENST00000479791 ADGRB2O60241 1585 aa16.25■□□□□ 0.19
LYSMD4-206ENST00000479791 SMC4Q9NTJ3 1288 aa16.25■□□□□ 0.19
LYSMD4-206ENST00000479791 DEPDC5O75140 1603 aa16.25■□□□□ 0.19
LYSMD4-206ENST00000479791 PLCH2O75038 1416 aa16.25■□□□□ 0.19
LYSMD4-206ENST00000479791 MTHFSP49914 203 aa16.24■□□□□ 0.19
LYSMD4-206ENST00000479791 NUCB1Q02818 461 aa16.24■□□□□ 0.19
LYSMD4-206ENST00000479791 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
LYSMD4-206ENST00000479791 KIAA1211Q6ZU35 1233 aa16.24■□□□□ 0.19
LYSMD4-206ENST00000479791 ITPRIPQ8IWB1 547 aa16.24■□□□□ 0.19
LYSMD4-206ENST00000479791 OFD1O75665 1012 aa16.24■□□□□ 0.19
LYSMD4-206ENST00000479791 NASPP49321 788 aaPredicted RBP16.23■□□□□ 0.19
LYSMD4-206ENST00000479791 ANP32BQ92688 251 aaKnown RBP16.23■□□□□ 0.19
LYSMD4-206ENST00000479791 ZBTB40Q9NUA8 1239 aa16.23■□□□□ 0.19
LYSMD4-206ENST00000479791 ABCC1P33527 1531 aa16.23■□□□□ 0.19
LYSMD4-206ENST00000479791 GOLGA6L22H0YM25 854 aa16.23■□□□□ 0.19
LYSMD4-206ENST00000479791 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
LYSMD4-206ENST00000479791 BMP2KLQ5H9B9 411 aa16.22■□□□□ 0.19
LYSMD4-206ENST00000479791 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
LYSMD4-206ENST00000479791 KIF2CQ99661 725 aa16.22■□□□□ 0.19
LYSMD4-206ENST00000479791 ADGRF5Q8IZF2 1346 aa16.22■□□□□ 0.19
LYSMD4-206ENST00000479791 KLHL40Q2TBA0 621 aa16.21■□□□□ 0.19
LYSMD4-206ENST00000479791 TRAPPC8Q9Y2L5 1435 aa16.21■□□□□ 0.19
LYSMD4-206ENST00000479791 K7ELQ4 463 aaPredicted RBP16.21■□□□□ 0.19
LYSMD4-206ENST00000479791 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.21■□□□□ 0.19
LYSMD4-206ENST00000479791 SSH1Q8WYL5 1049 aa16.21■□□□□ 0.19
LYSMD4-206ENST00000479791 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.19
LYSMD4-206ENST00000479791 ARHGAP31Q2M1Z3 1444 aa16.21■□□□□ 0.19
LYSMD4-206ENST00000479791 KIF16BQ96L93 1317 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms