RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.18■■□□□ 1.78
COL13A1-208ENST00000479733 HSCBQ8IWL3 235 aa26.18■■□□□ 1.78
COL13A1-208ENST00000479733 ERVK-7P63135 1459 aa26.18■■□□□ 1.78
COL13A1-208ENST00000479733 DZIP1LQ8IYY4 767 aaKnown RBP26.17■■□□□ 1.78
COL13A1-208ENST00000479733 MYH16Q9H6N6 1097 aa26.17■■□□□ 1.78
COL13A1-208ENST00000479733 MRE11P49959 708 aa26.17■■□□□ 1.78
COL13A1-208ENST00000479733 AAMPQ13685 434 aa26.17■■□□□ 1.78
COL13A1-208ENST00000479733 ZKSCAN2Q63HK3 967 aa26.16■■□□□ 1.78
COL13A1-208ENST00000479733 WDR63Q8IWG1 891 aa26.16■■□□□ 1.78
COL13A1-208ENST00000479733 GRPEL1Q9HAV7 217 aa26.15■■□□□ 1.78
COL13A1-208ENST00000479733 KDM5AP29375 1690 aaKnown RBP26.15■■□□□ 1.78
COL13A1-208ENST00000479733 ITPRIPQ8IWB1 547 aa26.15■■□□□ 1.78
COL13A1-208ENST00000479733 NSD3Q9BZ95 1437 aa26.15■■□□□ 1.78
COL13A1-208ENST00000479733 U2AF1L5P0DN76 240 aaPredicted RBP26.15■■□□□ 1.78
COL13A1-208ENST00000479733 U2AF1Q01081 240 aaKnown RBP eCLIP26.15■■□□□ 1.78
COL13A1-208ENST00000479733 TRAK1Q9UPV9 953 aa26.15■■□□□ 1.78
COL13A1-208ENST00000479733 PLXNC1O60486 1568 aa26.14■■□□□ 1.78
COL13A1-208ENST00000479733 EFCAB2Q5VUJ9 269 aa26.14■■□□□ 1.78
COL13A1-208ENST00000479733 HSP90AA1P07900 732 aaKnown RBP26.14■■□□□ 1.77
COL13A1-208ENST00000479733 SMC4Q9NTJ3 1288 aa26.14■■□□□ 1.77
COL13A1-208ENST00000479733 SPAG9O60271 1321 aaKnown RBP26.13■■□□□ 1.77
COL13A1-208ENST00000479733 TRAPPC8Q9Y2L5 1435 aa26.13■■□□□ 1.77
COL13A1-208ENST00000479733 FOXD4L1Q9NU39 408 aa26.12■■□□□ 1.77
COL13A1-208ENST00000479733 CHGAP10645 457 aaKnown RBP26.12■■□□□ 1.77
COL13A1-208ENST00000479733 STAC3Q96MF2 364 aa26.11■■□□□ 1.77
COL13A1-208ENST00000479733 HSP90AA2PQ14568 343 aaPredicted RBP26.11■■□□□ 1.77
COL13A1-208ENST00000479733 PHF23Q9BUL5 403 aaPredicted RBP26.1■■□□□ 1.77
COL13A1-208ENST00000479733 VSIG10Q8N0Z9 540 aa26.09■■□□□ 1.77
COL13A1-208ENST00000479733 ERBB4Q15303 1308 aa26.09■■□□□ 1.77
COL13A1-208ENST00000479733 DDX11L8A8MPP1 907 aa26.08■■□□□ 1.77
COL13A1-208ENST00000479733 RTEL1-TNFRSF6BF6WH68 1400 aa26.08■■□□□ 1.77
COL13A1-208ENST00000479733 ESPNB1AK53 854 aa26.08■■□□□ 1.77
COL13A1-208ENST00000479733 KIF3BO15066 747 aa26.08■■□□□ 1.77
COL13A1-208ENST00000479733 TRIM27P14373 513 aa26.08■■□□□ 1.77
COL13A1-208ENST00000479733 EXOSC9Q06265 439 aaKnown RBP26.08■■□□□ 1.77
COL13A1-208ENST00000479733 CFAP53Q96M91 514 aa26.08■■□□□ 1.77
COL13A1-208ENST00000479733 CLTCL1P53675 1640 aa26.08■■□□□ 1.77
COL13A1-208ENST00000479733 GLIPR1L2Q4G1C9 344 aa26.08■■□□□ 1.76
COL13A1-208ENST00000479733 CEP152O94986 1710 aa26.07■■□□□ 1.76
COL13A1-208ENST00000479733 ZNF692Q9BU19 519 aaPredicted RBP26.07■■□□□ 1.76
COL13A1-208ENST00000479733 SPHKAPQ2M3C7 1700 aa26.07■■□□□ 1.76
COL13A1-208ENST00000479733 SLC24A1O60721 1099 aa26.07■■□□□ 1.76
COL13A1-208ENST00000479733 ZMYM3Q14202 1370 aa26.07■■□□□ 1.76
COL13A1-208ENST00000479733 TRIM44Q96DX7 344 aaPredicted RBP26.06■■□□□ 1.76
COL13A1-208ENST00000479733 TRPM2O94759 1503 aa26.06■■□□□ 1.76
COL13A1-208ENST00000479733 GAS2L3Q86XJ1 694 aa26.06■■□□□ 1.76
COL13A1-208ENST00000479733 TNPO1Q92973 898 aaKnown RBP26.06■■□□□ 1.76
COL13A1-208ENST00000479733 LNPKQ9C0E8 428 aa26.05■■□□□ 1.76
COL13A1-208ENST00000479733 HSP90AB1P08238 724 aaKnown RBP26.04■■□□□ 1.76
COL13A1-208ENST00000479733 SSH1Q8WYL5 1049 aa26.04■■□□□ 1.76
COL13A1-208ENST00000479733 TMEM132EQ6IEE7 984 aa26.03■■□□□ 1.76
COL13A1-208ENST00000479733 U2SURPO15042 1029 aaKnown RBP26.03■■□□□ 1.76
COL13A1-208ENST00000479733 NOB1Q9ULX3 412 aaKnown RBP26.03■■□□□ 1.76
COL13A1-208ENST00000479733 PTPRTO14522 1441 aa26.03■■□□□ 1.76
COL13A1-208ENST00000479733 ERCC6L2Q5T890 1561 aa26.02■■□□□ 1.76
COL13A1-208ENST00000479733 UGGT1Q9NYU2 1555 aa26.02■■□□□ 1.76
COL13A1-208ENST00000479733 CCDC27Q2M243 656 aa26.01■■□□□ 1.75
COL13A1-208ENST00000479733 TMEM57Q8N5G2 664 aa26.01■■□□□ 1.75
COL13A1-208ENST00000479733 DDX19BQ9UMR2 479 aa26.01■■□□□ 1.75
COL13A1-208ENST00000479733 IQSEC2Q5JU85 1478 aa26■■□□□ 1.75
COL13A1-208ENST00000479733 HDAC1Q13547 482 aaPredicted RBP26■■□□□ 1.75
COL13A1-208ENST00000479733 ATF7IPQ6VMQ6 1270 aa25.99■■□□□ 1.75
COL13A1-208ENST00000479733 PKNOX2Q96KN3 472 aa25.99■■□□□ 1.75
COL13A1-208ENST00000479733 SENP3Q9H4L4 574 aaPredicted RBP25.99■■□□□ 1.75
COL13A1-208ENST00000479733 PLCH2O75038 1416 aa25.98■■□□□ 1.75
COL13A1-208ENST00000479733 SHPRHQ149N8 1683 aa25.97■■□□□ 1.75
COL13A1-208ENST00000479733 KANK1Q14678 1352 aa25.97■■□□□ 1.75
COL13A1-208ENST00000479733 SMC5Q8IY18 1101 aa25.96■■□□□ 1.75
COL13A1-208ENST00000479733 GBP4Q96PP9 640 aa25.95■■□□□ 1.75
COL13A1-208ENST00000479733 ZMYND15Q9H091 742 aa25.95■■□□□ 1.75
COL13A1-208ENST00000479733 RRP9O43818 475 aaKnown RBP25.95■■□□□ 1.74
COL13A1-208ENST00000479733 CD2BP2O95400 341 aaKnown RBP25.94■■□□□ 1.74
COL13A1-208ENST00000479733 DDIT3P35638 169 aa25.94■■□□□ 1.74
COL13A1-208ENST00000479733 RBM42Q9BTD8 480 aaKnown RBP25.94■■□□□ 1.74
COL13A1-208ENST00000479733 SHROOM2Q13796 1616 aa25.93■■□□□ 1.74
COL13A1-208ENST00000479733 RBM25P49756 843 aaKnown RBP25.93■■□□□ 1.74
COL13A1-208ENST00000479733 ZNF518AQ6AHZ1 1483 aa25.92■■□□□ 1.74
COL13A1-208ENST00000479733 SAFB2Q14151 953 aaKnown RBP eCLIP25.92■■□□□ 1.74
COL13A1-208ENST00000479733 ABCA6Q8N139 1617 aa25.91■■□□□ 1.74
COL13A1-208ENST00000479733 NUTM2DQ5VT03 806 aaPredicted RBP25.91■■□□□ 1.74
COL13A1-208ENST00000479733 ZBTB40Q9NUA8 1239 aa25.91■■□□□ 1.74
COL13A1-208ENST00000479733 TMPOP42166 694 aaKnown RBP25.9■■□□□ 1.74
COL13A1-208ENST00000479733 NUCB1Q02818 461 aa25.9■■□□□ 1.74
COL13A1-208ENST00000479733 RAB3GAP1Q15042 981 aa25.9■■□□□ 1.74
COL13A1-208ENST00000479733 SNX21Q969T3 373 aa25.9■■□□□ 1.74
COL13A1-208ENST00000479733 ANKRD45Q5TZF3 282 aa25.89■■□□□ 1.74
COL13A1-208ENST00000479733 CHD1LQ86WJ1 897 aa25.89■■□□□ 1.74
COL13A1-208ENST00000479733 TRIM35Q9UPQ4 493 aa25.89■■□□□ 1.73
COL13A1-208ENST00000479733 C1orf115Q9H7X2 142 aa25.88■■□□□ 1.73
COL13A1-208ENST00000479733 NOS1P29475 1434 aa25.88■■□□□ 1.73
COL13A1-208ENST00000479733 SSFA2P28290 1259 aa25.87■■□□□ 1.73
COL13A1-208ENST00000479733 ISY1Q9ULR0 285 aaKnown RBP25.87■■□□□ 1.73
COL13A1-208ENST00000479733 MAP3K4Q9Y6R4 1608 aa25.87■■□□□ 1.73
COL13A1-208ENST00000479733 CABP2Q9NPB3 220 aa25.87■■□□□ 1.73
COL13A1-208ENST00000479733 KIF2CQ99661 725 aa25.86■■□□□ 1.73
COL13A1-208ENST00000479733 NCOA3Q9Y6Q9 1424 aa25.86■■□□□ 1.73
COL13A1-208ENST00000479733 ABCC1P33527 1531 aa25.86■■□□□ 1.73
COL13A1-208ENST00000479733 GGNBP2Q9H3C7 697 aa25.86■■□□□ 1.73
COL13A1-208ENST00000479733 RIPK4P57078 832 aa25.85■■□□□ 1.73
COL13A1-208ENST00000479733 CT47B1P0C2W7 299 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms