RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 DLC1Q96QB1 1528 aa19.55■□□□□ 0.72
CLDN18-203ENST00000479660 SLIT1O75093 1534 aa19.55■□□□□ 0.72
CLDN18-203ENST00000479660 WAPLQ7Z5K2 1190 aa19.54■□□□□ 0.72
CLDN18-203ENST00000479660 CARD14Q9BXL6 1004 aa19.54■□□□□ 0.72
CLDN18-203ENST00000479660 ARHGAP23Q9P227 1491 aa19.54■□□□□ 0.72
CLDN18-203ENST00000479660 SRPK2P78362 688 aaKnown RBP19.54■□□□□ 0.72
CLDN18-203ENST00000479660 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
CLDN18-203ENST00000479660 ADAMTS13Q76LX8 1427 aa19.53■□□□□ 0.72
CLDN18-203ENST00000479660 NPC1L1Q9UHC9 1359 aa19.52■□□□□ 0.72
CLDN18-203ENST00000479660 PNISRQ8TF01 805 aaKnown RBP19.52■□□□□ 0.72
CLDN18-203ENST00000479660 PLEKHH1Q9ULM0 1364 aa19.51■□□□□ 0.71
CLDN18-203ENST00000479660 GTF3C3Q9Y5Q9 886 aa19.51■□□□□ 0.71
CLDN18-203ENST00000479660 SIRT1Q96EB6 747 aa19.49■□□□□ 0.71
CLDN18-203ENST00000479660 CEP170BQ9Y4F5 1589 aaPredicted RBP19.49■□□□□ 0.71
CLDN18-203ENST00000479660 SLC26A8Q96RN1 970 aa19.49■□□□□ 0.71
CLDN18-203ENST00000479660 CDK19Q9BWU1 502 aa19.49■□□□□ 0.71
CLDN18-203ENST00000479660 ATAD2Q6PL18 1390 aa19.48■□□□□ 0.71
CLDN18-203ENST00000479660 TECPR2O15040 1411 aa19.48■□□□□ 0.71
CLDN18-203ENST00000479660 NINLQ9Y2I6 1382 aa19.47■□□□□ 0.71
CLDN18-203ENST00000479660 FAM135BQ49AJ0 1406 aa19.46■□□□□ 0.71
CLDN18-203ENST00000479660 NSD3Q9BZ95 1437 aa19.46■□□□□ 0.71
CLDN18-203ENST00000479660 MED14O60244 1454 aa19.46■□□□□ 0.71
CLDN18-203ENST00000479660 ANKRD36BQ8N2N9 1353 aa19.46■□□□□ 0.71
CLDN18-203ENST00000479660 TBX22Q9Y458 520 aa19.46■□□□□ 0.71
CLDN18-203ENST00000479660 SETD1BQ9UPS6 1966 aaKnown RBP19.45■□□□□ 0.7
CLDN18-203ENST00000479660 KNDC1Q76NI1 1749 aa19.45■□□□□ 0.7
CLDN18-203ENST00000479660 PPP2R1AP30153 589 aa19.45■□□□□ 0.7
CLDN18-203ENST00000479660 CPS1P31327 1500 aa19.43■□□□□ 0.7
CLDN18-203ENST00000479660 ROBO2Q9HCK4 1378 aa19.42■□□□□ 0.7
CLDN18-203ENST00000479660 CGNL1Q0VF96 1302 aa19.41■□□□□ 0.7
CLDN18-203ENST00000479660 WASLO00401 505 aaPredicted RBP19.41■□□□□ 0.7
CLDN18-203ENST00000479660 ANKLE2Q86XL3 938 aa19.41■□□□□ 0.7
CLDN18-203ENST00000479660 TERF2IPQ9NYB0 399 aa19.41■□□□□ 0.7
CLDN18-203ENST00000479660 ZBED9Q6R2W3 1325 aa19.4■□□□□ 0.7
CLDN18-203ENST00000479660 PTPRUQ92729 1446 aa19.4■□□□□ 0.7
CLDN18-203ENST00000479660 A0A1W2PP64 1363 aa19.4■□□□□ 0.7
CLDN18-203ENST00000479660 CABP1Q9NZU7 370 aa19.39■□□□□ 0.69
CLDN18-203ENST00000479660 AMOTL2Q9Y2J4 779 aa19.39■□□□□ 0.69
CLDN18-203ENST00000479660 ZNF142P52746 1687 aaPredicted RBP19.39■□□□□ 0.69
CLDN18-203ENST00000479660 DIP2AQ14689 1571 aa19.38■□□□□ 0.69
CLDN18-203ENST00000479660 MORC1Q86VD1 984 aa19.37■□□□□ 0.69
CLDN18-203ENST00000479660 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
CLDN18-203ENST00000479660 USP32Q8NFA0 1604 aa19.37■□□□□ 0.69
CLDN18-203ENST00000479660 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
CLDN18-203ENST00000479660 NSD2O96028 1365 aa19.34■□□□□ 0.69
CLDN18-203ENST00000479660 NUDT16Q96DE0 195 aaKnown RBP19.34■□□□□ 0.69
CLDN18-203ENST00000479660 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
CLDN18-203ENST00000479660 PTCH1Q13635 1447 aa19.32■□□□□ 0.68
CLDN18-203ENST00000479660 TNNT2P45379 298 aaPredicted RBP19.32■□□□□ 0.68
CLDN18-203ENST00000479660 PIK3R4Q99570 1358 aa19.31■□□□□ 0.68
CLDN18-203ENST00000479660 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.31■□□□□ 0.68
CLDN18-203ENST00000479660 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
CLDN18-203ENST00000479660 ATP7BP35670 1465 aa19.3■□□□□ 0.68
CLDN18-203ENST00000479660 WDR43Q15061 677 aaKnown RBP eCLIP19.3■□□□□ 0.68
CLDN18-203ENST00000479660 SENP3-EIF4A1A0A087X0R7 540 aa19.3■□□□□ 0.68
CLDN18-203ENST00000479660 INSRP06213 1382 aa19.3■□□□□ 0.68
CLDN18-203ENST00000479660 ADAMTS8Q9UP79 889 aa19.29■□□□□ 0.68
CLDN18-203ENST00000479660 FYB1O15117 783 aa19.29■□□□□ 0.68
CLDN18-203ENST00000479660 KCNA6P17658 529 aa19.29■□□□□ 0.68
CLDN18-203ENST00000479660 ADGRB2O60241 1585 aa19.28■□□□□ 0.68
CLDN18-203ENST00000479660 GGNBP2Q9H3C7 697 aa19.28■□□□□ 0.68
CLDN18-203ENST00000479660 NCKAP5LQ9HCH0 1330 aa19.28■□□□□ 0.68
CLDN18-203ENST00000479660 PRR36Q9H6K5 1346 aa19.27■□□□□ 0.68
CLDN18-203ENST00000479660 XRN1Q8IZH2 1706 aaKnown RBP19.26■□□□□ 0.67
CLDN18-203ENST00000479660 CPSF1Q10570 1443 aaKnown RBP19.26■□□□□ 0.67
CLDN18-203ENST00000479660 POLR3AO14802 1390 aaPredicted RBP19.26■□□□□ 0.67
CLDN18-203ENST00000479660 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
CLDN18-203ENST00000479660 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLDN18-203ENST00000479660 NUTM2FA1L443 756 aa19.24■□□□□ 0.67
CLDN18-203ENST00000479660 MTHFSP49914 203 aa19.24■□□□□ 0.67
CLDN18-203ENST00000479660 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
CLDN18-203ENST00000479660 ZNF692Q9BU19 519 aaPredicted RBP19.22■□□□□ 0.67
CLDN18-203ENST00000479660 SALL2Q9Y467 1007 aaPredicted RBP19.22■□□□□ 0.67
CLDN18-203ENST00000479660 CDC42BPGQ6DT37 1551 aa19.22■□□□□ 0.67
CLDN18-203ENST00000479660 EDC4Q6P2E9 1401 aaKnown RBP19.21■□□□□ 0.67
CLDN18-203ENST00000479660 CHD2O14647 1828 aaKnown RBP19.21■□□□□ 0.66
CLDN18-203ENST00000479660 CFAP53Q96M91 514 aa19.2■□□□□ 0.66
CLDN18-203ENST00000479660 PLEKHG3A1L390 1219 aa19.2■□□□□ 0.66
CLDN18-203ENST00000479660 ANKRD26Q9UPS8 1709 aa19.19■□□□□ 0.66
CLDN18-203ENST00000479660 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
CLDN18-203ENST00000479660 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
CLDN18-203ENST00000479660 ACEP12821 1306 aa19.18■□□□□ 0.66
CLDN18-203ENST00000479660 NUDCQ9Y266 331 aa19.17■□□□□ 0.66
CLDN18-203ENST00000479660 SMG6Q86US8 1419 aaKnown RBP19.17■□□□□ 0.66
CLDN18-203ENST00000479660 NME9Q86XW9 330 aa19.16■□□□□ 0.66
CLDN18-203ENST00000479660 TOPAZ1Q8N9V7 1692 aa19.16■□□□□ 0.66
CLDN18-203ENST00000479660 ITSN1Q15811 1721 aa19.16■□□□□ 0.66
CLDN18-203ENST00000479660 AKAP12Q02952 1782 aa19.15■□□□□ 0.66
CLDN18-203ENST00000479660 NEFLP07196 543 aa19.15■□□□□ 0.66
CLDN18-203ENST00000479660 MON2Q7Z3U7 1717 aa19.15■□□□□ 0.66
CLDN18-203ENST00000479660 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
CLDN18-203ENST00000479660 KDM4FA0A1W2PPD8 638 aa19.14■□□□□ 0.65
CLDN18-203ENST00000479660 PDE3BQ13370 1112 aa19.14■□□□□ 0.65
CLDN18-203ENST00000479660 PMFBP1Q8TBY8 1022 aa19.13■□□□□ 0.65
CLDN18-203ENST00000479660 RBM33Q96EV2 1170 aaKnown RBP19.13■□□□□ 0.65
CLDN18-203ENST00000479660 FKBP8Q14318 412 aa19.13■□□□□ 0.65
CLDN18-203ENST00000479660 NKTRP30414 1462 aaKnown RBP19.13■□□□□ 0.65
CLDN18-203ENST00000479660 COG3Q96JB2 828 aa19.12■□□□□ 0.65
CLDN18-203ENST00000479660 ZRANB1Q9UGI0 708 aa19.12■□□□□ 0.65
CLDN18-203ENST00000479660 TTC21BQ7Z4L5 1316 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms