RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
HMGCL-205ENST00000479458 GCC2Q8IWJ2 1684 aa11.69□□□□□ -0.54
HMGCL-205ENST00000479458 MYCNP04198 464 aaPredicted RBP11.69□□□□□ -0.54
HMGCL-205ENST00000479458 AMOTL2Q9Y2J4 779 aa11.69□□□□□ -0.54
HMGCL-205ENST00000479458 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
HMGCL-205ENST00000479458 SOS2Q07890 1332 aaPredicted RBP11.68□□□□□ -0.54
HMGCL-205ENST00000479458 ADAMTS2O95450 1211 aa11.68□□□□□ -0.54
HMGCL-205ENST00000479458 PTPRUQ92729 1446 aa11.68□□□□□ -0.54
HMGCL-205ENST00000479458 MARF1Q9Y4F3 1742 aaKnown RBP11.67□□□□□ -0.54
HMGCL-205ENST00000479458 HRCP23327 699 aa11.67□□□□□ -0.54
HMGCL-205ENST00000479458 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
HMGCL-205ENST00000479458 RNF39Q9H2S5 420 aa11.66□□□□□ -0.54
HMGCL-205ENST00000479458 ADGRL3Q9HAR2 1447 aa11.65□□□□□ -0.54
HMGCL-205ENST00000479458 MYOM2P54296 1465 aa11.64□□□□□ -0.55
HMGCL-205ENST00000479458 SF3B2Q13435 895 aaKnown RBP11.64□□□□□ -0.55
HMGCL-205ENST00000479458 IFFO2Q5TF58 517 aa11.64□□□□□ -0.55
HMGCL-205ENST00000479458 DEFB132Q7Z7B7 95 aa11.64□□□□□ -0.55
HMGCL-205ENST00000479458 BRWD3Q6RI45 1802 aa11.64□□□□□ -0.55
HMGCL-205ENST00000479458 YY1P25490 414 aa11.63□□□□□ -0.55
HMGCL-205ENST00000479458 C1orf167Q5SNV9 1468 aa11.63□□□□□ -0.55
HMGCL-205ENST00000479458 NAIPQ13075 1403 aa11.62□□□□□ -0.55
HMGCL-205ENST00000479458 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
HMGCL-205ENST00000479458 GLI3P10071 1580 aa11.61□□□□□ -0.55
HMGCL-205ENST00000479458 IQGAP3Q86VI3 1631 aa11.6□□□□□ -0.55
HMGCL-205ENST00000479458 NALCNQ8IZF0 1738 aa11.6□□□□□ -0.55
HMGCL-205ENST00000479458 ONECUT3O60422 494 aaPredicted RBP11.6□□□□□ -0.55
HMGCL-205ENST00000479458 NRXN3Q9Y4C0 1643 aa11.6□□□□□ -0.55
HMGCL-205ENST00000479458 HFM1A2PYH4 1435 aa11.6□□□□□ -0.55
HMGCL-205ENST00000479458 RALGAPBQ86X10 1494 aa11.59□□□□□ -0.55
HMGCL-205ENST00000479458 SLIT2O94813 1529 aa11.59□□□□□ -0.55
HMGCL-205ENST00000479458 NUP155O75694 1391 aa11.58□□□□□ -0.56
HMGCL-205ENST00000479458 BAG6P46379 1132 aa11.58□□□□□ -0.56
HMGCL-205ENST00000479458 UNC5CLQ8IV45 518 aa11.58□□□□□ -0.56
HMGCL-205ENST00000479458 DISP2A7MBM2 1401 aa11.57□□□□□ -0.56
HMGCL-205ENST00000479458 PSDA5PKW4 1024 aaPredicted RBP11.56□□□□□ -0.56
HMGCL-205ENST00000479458 PRAG1Q86YV5 1406 aa11.56□□□□□ -0.56
HMGCL-205ENST00000479458 E9PCH4 1651 aa11.55□□□□□ -0.56
HMGCL-205ENST00000479458 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
HMGCL-205ENST00000479458 NPHP3Q7Z494 1330 aa11.54□□□□□ -0.56
HMGCL-205ENST00000479458 METP08581 1390 aa11.54□□□□□ -0.56
HMGCL-205ENST00000479458 RGPD1P0DJD0 1748 aa11.53□□□□□ -0.56
HMGCL-205ENST00000479458 KRT27Q7Z3Y8 459 aa11.53□□□□□ -0.56
HMGCL-205ENST00000479458 ORAI2Q96SN7 254 aa11.53□□□□□ -0.56
HMGCL-205ENST00000479458 NWD2Q9ULI1 1742 aa11.52□□□□□ -0.56
HMGCL-205ENST00000479458 PXDNQ92626 1479 aa11.52□□□□□ -0.56
HMGCL-205ENST00000479458 C1QBPQ07021 282 aaKnown RBP11.52□□□□□ -0.57
HMGCL-205ENST00000479458 VPS72Q15906 364 aa11.52□□□□□ -0.57
HMGCL-205ENST00000479458 SAMD1Q6SPF0 538 aaPredicted RBP11.51□□□□□ -0.57
HMGCL-205ENST00000479458 CHGAP10645 457 aaKnown RBP11.5□□□□□ -0.57
HMGCL-205ENST00000479458 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
HMGCL-205ENST00000479458 R3HDM1Q15032 1099 aaKnown RBP11.49□□□□□ -0.57
HMGCL-205ENST00000479458 LRPPRCP42704 1394 aaKnown RBP11.49□□□□□ -0.57
HMGCL-205ENST00000479458 USP32Q8NFA0 1604 aa11.49□□□□□ -0.57
HMGCL-205ENST00000479458 NINLQ9Y2I6 1382 aa11.48□□□□□ -0.57
HMGCL-205ENST00000479458 PARD3Q8TEW0 1356 aa11.47□□□□□ -0.57
HMGCL-205ENST00000479458 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.57
HMGCL-205ENST00000479458 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-205ENST00000479458 CDC42BPGQ6DT37 1551 aa11.45□□□□□ -0.58
HMGCL-205ENST00000479458 UTRNP46939 3433 aa11.44□□□□□ -0.58
HMGCL-205ENST00000479458 RAB3GAP2Q9H2M9 1393 aa11.44□□□□□ -0.58
HMGCL-205ENST00000479458 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
HMGCL-205ENST00000479458 SPATA31A3Q5VYP0 1347 aa11.44□□□□□ -0.58
HMGCL-205ENST00000479458 PLCH1Q4KWH8 1693 aa11.44□□□□□ -0.58
HMGCL-205ENST00000479458 CLTCL1P53675 1640 aa11.43□□□□□ -0.58
HMGCL-205ENST00000479458 ACIN1Q9UKV3 1341 aaKnown RBP11.43□□□□□ -0.58
HMGCL-205ENST00000479458 ADGRB2O60241 1585 aa11.43□□□□□ -0.58
HMGCL-205ENST00000479458 ZNF784Q8NCA9 323 aaPredicted RBP11.43□□□□□ -0.58
HMGCL-205ENST00000479458 CAMKK2Q96RR4 588 aa11.43□□□□□ -0.58
HMGCL-205ENST00000479458 CHD4Q14839 1912 aa11.43□□□□□ -0.58
HMGCL-205ENST00000479458 FOXO3O43524 673 aa11.42□□□□□ -0.58
HMGCL-205ENST00000479458 ESCO1Q5FWF5 840 aa11.42□□□□□ -0.58
HMGCL-205ENST00000479458 NEXMIFQ5QGS0 1516 aa11.41□□□□□ -0.58
HMGCL-205ENST00000479458 RREB1Q92766 1687 aa11.41□□□□□ -0.58
HMGCL-205ENST00000479458 SENP3-EIF4A1A0A087X0R7 540 aa11.41□□□□□ -0.58
HMGCL-205ENST00000479458 C1QTNF8P60827 252 aa11.41□□□□□ -0.58
HMGCL-205ENST00000479458 MPHOSPH9Q99550 1183 aa11.41□□□□□ -0.58
HMGCL-205ENST00000479458 CCDC144AA2RUR9 1427 aa11.41□□□□□ -0.58
HMGCL-205ENST00000479458 ATF5Q9Y2D1 282 aaPredicted RBP11.4□□□□□ -0.58
HMGCL-205ENST00000479458 NRAPQ86VF7 1730 aa11.4□□□□□ -0.58
HMGCL-205ENST00000479458 KIF1AQ12756 1690 aa11.4□□□□□ -0.59
HMGCL-205ENST00000479458 EZH2Q15910 746 aaKnown RBP11.39□□□□□ -0.59
HMGCL-205ENST00000479458 SPON1Q9HCB6 807 aa11.39□□□□□ -0.59
HMGCL-205ENST00000479458 KIF1BO60333 1816 aa11.38□□□□□ -0.59
HMGCL-205ENST00000479458 THSD7AQ9UPZ6 1657 aa11.38□□□□□ -0.59
HMGCL-205ENST00000479458 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
HMGCL-205ENST00000479458 CEP350Q5VT06 3117 aa11.37□□□□□ -0.59
HMGCL-205ENST00000479458 KCNQ2O43526 872 aa11.37□□□□□ -0.59
HMGCL-205ENST00000479458 NUP188Q5SRE5 1749 aa11.37□□□□□ -0.59
HMGCL-205ENST00000479458 NBPF8Q3BBV2 869 aa11.36□□□□□ -0.59
HMGCL-205ENST00000479458 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
HMGCL-205ENST00000479458 PPP1R1BQ9UD71 204 aaPredicted RBP11.36□□□□□ -0.59
HMGCL-205ENST00000479458 CCDC9Q9Y3X0 531 aaKnown RBP11.36□□□□□ -0.59
HMGCL-205ENST00000479458 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
HMGCL-205ENST00000479458 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-205ENST00000479458 XPCQ01831 940 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-205ENST00000479458 FAM98CQ17RN3 349 aaKnown RBP11.35□□□□□ -0.59
HMGCL-205ENST00000479458 ZNF326Q5BKZ1 582 aaKnown RBP11.35□□□□□ -0.59
HMGCL-205ENST00000479458 FAM196AQ6ZSG2 479 aa11.35□□□□□ -0.59
HMGCL-205ENST00000479458 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
HMGCL-205ENST00000479458 SBNO1A3KN83 1393 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms