RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.68□□□□□ -1.02
CNOT10-215ENST00000479397 ATRNO75882 1429 aa8.68□□□□□ -1.02
CNOT10-215ENST00000479397 PTCH1Q13635 1447 aa8.68□□□□□ -1.02
CNOT10-215ENST00000479397 ADAMTS13Q76LX8 1427 aa8.67□□□□□ -1.02
CNOT10-215ENST00000479397 PTPN23Q9H3S7 1636 aa8.66□□□□□ -1.02
CNOT10-215ENST00000479397 SF3B2Q13435 895 aaKnown RBP8.66□□□□□ -1.02
CNOT10-215ENST00000479397 FNBP4Q8N3X1 1017 aaPredicted RBP8.66□□□□□ -1.02
CNOT10-215ENST00000479397 RRP7BPQ9NSQ0 103 aa8.65□□□□□ -1.02
CNOT10-215ENST00000479397 IQGAP3Q86VI3 1631 aa8.65□□□□□ -1.03
CNOT10-215ENST00000479397 RGPD1P0DJD0 1748 aa8.64□□□□□ -1.03
CNOT10-215ENST00000479397 AMOTL2Q9Y2J4 779 aa8.64□□□□□ -1.03
CNOT10-215ENST00000479397 NRXN3Q9Y4C0 1643 aa8.64□□□□□ -1.03
CNOT10-215ENST00000479397 PTPRUQ92729 1446 aa8.63□□□□□ -1.03
CNOT10-215ENST00000479397 ADGRL3Q9HAR2 1447 aa8.63□□□□□ -1.03
CNOT10-215ENST00000479397 E9PCH4 1651 aa8.62□□□□□ -1.03
CNOT10-215ENST00000479397 GLI3P10071 1580 aa8.62□□□□□ -1.03
CNOT10-215ENST00000479397 MKRN4PQ13434 485 aaPredicted RBP8.62□□□□□ -1.03
CNOT10-215ENST00000479397 DDX17Q92841 729 aaKnown RBP8.62□□□□□ -1.03
CNOT10-215ENST00000479397 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
CNOT10-215ENST00000479397 ABCC5O15440 1437 aa8.62□□□□□ -1.03
CNOT10-215ENST00000479397 ANKRD30AQ9BXX3 1397 aa8.61□□□□□ -1.03
CNOT10-215ENST00000479397 NWD2Q9ULI1 1742 aa8.61□□□□□ -1.03
CNOT10-215ENST00000479397 DEFB132Q7Z7B7 95 aa8.61□□□□□ -1.03
CNOT10-215ENST00000479397 BCL9LQ86UU0 1499 aa8.61□□□□□ -1.03
CNOT10-215ENST00000479397 DAPK1P53355 1430 aa8.61□□□□□ -1.03
CNOT10-215ENST00000479397 SOS2Q07890 1332 aaPredicted RBP8.6□□□□□ -1.03
CNOT10-215ENST00000479397 C1orf167Q5SNV9 1468 aa8.6□□□□□ -1.03
CNOT10-215ENST00000479397 CHGAP10645 457 aaKnown RBP8.6□□□□□ -1.03
CNOT10-215ENST00000479397 HRCP23327 699 aa8.6□□□□□ -1.03
CNOT10-215ENST00000479397 YY1P25490 414 aa8.6□□□□□ -1.03
CNOT10-215ENST00000479397 PLCH1Q4KWH8 1693 aa8.59□□□□□ -1.03
CNOT10-215ENST00000479397 MYOM2P54296 1465 aa8.59□□□□□ -1.03
CNOT10-215ENST00000479397 CHD4Q14839 1912 aa8.59□□□□□ -1.03
CNOT10-215ENST00000479397 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
CNOT10-215ENST00000479397 RALGAPBQ86X10 1494 aa8.58□□□□□ -1.04
CNOT10-215ENST00000479397 AKT1S1Q96B36 256 aa8.58□□□□□ -1.04
CNOT10-215ENST00000479397 KIF1BO60333 1816 aa8.57□□□□□ -1.04
CNOT10-215ENST00000479397 BAG6P46379 1132 aa8.57□□□□□ -1.04
CNOT10-215ENST00000479397 POTEHQ6S545 545 aa8.57□□□□□ -1.04
CNOT10-215ENST00000479397 USP32Q8NFA0 1604 aa8.57□□□□□ -1.04
CNOT10-215ENST00000479397 TNS1Q9HBL0 1735 aaKnown RBP8.57□□□□□ -1.04
CNOT10-215ENST00000479397 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
CNOT10-215ENST00000479397 UNC5CLQ8IV45 518 aa8.55□□□□□ -1.04
CNOT10-215ENST00000479397 ADGRL2O95490 1459 aa8.55□□□□□ -1.04
CNOT10-215ENST00000479397 NPHP3Q7Z494 1330 aa8.54□□□□□ -1.04
CNOT10-215ENST00000479397 SLIT2O94813 1529 aa8.54□□□□□ -1.04
CNOT10-215ENST00000479397 ABCA3Q99758 1704 aa8.54□□□□□ -1.04
CNOT10-215ENST00000479397 ANKRD50Q9ULJ7 1429 aa8.54□□□□□ -1.04
CNOT10-215ENST00000479397 ADGRB2O60241 1585 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 PXDNQ92626 1479 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 METP08581 1390 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 KRT27Q7Z3Y8 459 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 SEPT12Q8IYM1 358 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 ORAI2Q96SN7 254 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 CHIC2Q9UKJ5 165 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 VPS8Q8N3P4 1428 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 KIF1AQ12756 1690 aa8.53□□□□□ -1.04
CNOT10-215ENST00000479397 CDC42BPGQ6DT37 1551 aa8.52□□□□□ -1.04
CNOT10-215ENST00000479397 LRPPRCP42704 1394 aaKnown RBP8.51□□□□□ -1.05
CNOT10-215ENST00000479397 RGPD8O14715 1765 aaPredicted RBP8.51□□□□□ -1.05
CNOT10-215ENST00000479397 RREB1Q92766 1687 aa8.51□□□□□ -1.05
CNOT10-215ENST00000479397 SPDYE2BA6NHP3 402 aa8.51□□□□□ -1.05
CNOT10-215ENST00000479397 SPDYE6P0CI01 402 aa8.51□□□□□ -1.05
CNOT10-215ENST00000479397 R3HDM1Q15032 1099 aaKnown RBP8.51□□□□□ -1.05
CNOT10-215ENST00000479397 SPDYE2Q495Y8 402 aa8.51□□□□□ -1.05
CNOT10-215ENST00000479397 CHRDL2Q6WN34 429 aa8.51□□□□□ -1.05
CNOT10-215ENST00000479397 REM2Q8IYK8 340 aaPredicted RBP8.51□□□□□ -1.05
CNOT10-215ENST00000479397 NRAPQ86VF7 1730 aa8.51□□□□□ -1.05
CNOT10-215ENST00000479397 CEP350Q5VT06 3117 aa8.51□□□□□ -1.05
CNOT10-215ENST00000479397 CAMTA1Q9Y6Y1 1673 aa8.5□□□□□ -1.05
CNOT10-215ENST00000479397 NUP188Q5SRE5 1749 aa8.5□□□□□ -1.05
CNOT10-215ENST00000479397 KANK4Q5T7N3 995 aaPredicted RBP8.5□□□□□ -1.05
CNOT10-215ENST00000479397 NEXMIFQ5QGS0 1516 aa8.49□□□□□ -1.05
CNOT10-215ENST00000479397 DISP2A7MBM2 1401 aa8.49□□□□□ -1.05
CNOT10-215ENST00000479397 A0A0G2JS52 829 aa8.49□□□□□ -1.05
CNOT10-215ENST00000479397 ONECUT3O60422 494 aaPredicted RBP8.49□□□□□ -1.05
CNOT10-215ENST00000479397 MYT1Q01538 1121 aa8.49□□□□□ -1.05
CNOT10-215ENST00000479397 EN1Q05925 392 aaPredicted RBP8.49□□□□□ -1.05
CNOT10-215ENST00000479397 VPS72Q15906 364 aa8.49□□□□□ -1.05
CNOT10-215ENST00000479397 ZNF326Q5BKZ1 582 aaKnown RBP8.49□□□□□ -1.05
CNOT10-215ENST00000479397 CCDC9Q9Y3X0 531 aaKnown RBP8.49□□□□□ -1.05
CNOT10-215ENST00000479397 UTRNP46939 3433 aa8.48□□□□□ -1.05
CNOT10-215ENST00000479397 HFM1A2PYH4 1435 aa8.48□□□□□ -1.05
CNOT10-215ENST00000479397 PRAG1Q86YV5 1406 aa8.48□□□□□ -1.05
CNOT10-215ENST00000479397 SENP3-EIF4A1A0A087X0R7 540 aa8.48□□□□□ -1.05
CNOT10-215ENST00000479397 ESCO1Q5FWF5 840 aa8.48□□□□□ -1.05
CNOT10-215ENST00000479397 FMN2Q9NZ56 1722 aa8.48□□□□□ -1.05
CNOT10-215ENST00000479397 IFT172Q9UG01 1749 aa8.48□□□□□ -1.05
CNOT10-215ENST00000479397 FOXO3O43524 673 aa8.47□□□□□ -1.05
CNOT10-215ENST00000479397 HAP1P54257 671 aaPredicted RBP8.47□□□□□ -1.05
CNOT10-215ENST00000479397 PPLO60437 1756 aa8.47□□□□□ -1.05
CNOT10-215ENST00000479397 NINLQ9Y2I6 1382 aa8.47□□□□□ -1.05
CNOT10-215ENST00000479397 CCDC144AA2RUR9 1427 aa8.46□□□□□ -1.05
CNOT10-215ENST00000479397 COL14A1Q05707 1796 aaKnown RBP8.46□□□□□ -1.05
CNOT10-215ENST00000479397 XPCQ01831 940 aaPredicted RBP8.46□□□□□ -1.06
CNOT10-215ENST00000479397 PPP1R1BQ9UD71 204 aaPredicted RBP8.46□□□□□ -1.06
CNOT10-215ENST00000479397 THSD7AQ9UPZ6 1657 aa8.46□□□□□ -1.06
CNOT10-215ENST00000479397 PARD3Q8TEW0 1356 aa8.46□□□□□ -1.06
CNOT10-215ENST00000479397 ROBO2Q9HCK4 1378 aa8.46□□□□□ -1.06
CNOT10-215ENST00000479397 CLTCL1P53675 1640 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms