RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 TSR3Q9UJK0 312 aaKnown RBP9.79□□□□□ -0.84
RFC4-212ENST00000479307 PCDHGC3Q9UN70 934 aa9.79□□□□□ -0.84
RFC4-212ENST00000479307 A6NJR5 290 aa9.77□□□□□ -0.85
RFC4-212ENST00000479307 APBB1O00213 710 aa9.77□□□□□ -0.85
RFC4-212ENST00000479307 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
RFC4-212ENST00000479307 CABLES1Q8TDN4 633 aa9.77□□□□□ -0.85
RFC4-212ENST00000479307 HLA-CQ95604 372 aa9.77□□□□□ -0.85
RFC4-212ENST00000479307 HPS5Q9UPZ3 1129 aa9.77□□□□□ -0.85
RFC4-212ENST00000479307 BCAMP50895 628 aa9.76□□□□□ -0.85
RFC4-212ENST00000479307 RTL5Q5HYW3 569 aaPredicted RBP9.76□□□□□ -0.85
RFC4-212ENST00000479307 PLA2G2EQ9NZK7 142 aa9.76□□□□□ -0.85
RFC4-212ENST00000479307 Q3C1V9 767 aa9.75□□□□□ -0.85
RFC4-212ENST00000479307 MORN1Q5T089 497 aa9.75□□□□□ -0.85
RFC4-212ENST00000479307 C6orf229H3BNL8 230 aa9.74□□□□□ -0.85
RFC4-212ENST00000479307 RAD21O60216 631 aa9.74□□□□□ -0.85
RFC4-212ENST00000479307 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
RFC4-212ENST00000479307 AP1G2O75843 785 aa9.73□□□□□ -0.85
RFC4-212ENST00000479307 SNRKQ9NRH2 765 aa9.73□□□□□ -0.85
RFC4-212ENST00000479307 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
RFC4-212ENST00000479307 APLP1P51693 650 aa9.72□□□□□ -0.85
RFC4-212ENST00000479307 NYAP1Q6ZVC0 841 aa9.72□□□□□ -0.85
RFC4-212ENST00000479307 PRM3Q9NNZ6 103 aa9.72□□□□□ -0.85
RFC4-212ENST00000479307 SLC27A5Q9Y2P5 690 aa9.72□□□□□ -0.85
RFC4-212ENST00000479307 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
RFC4-212ENST00000479307 SUPT5HO00267 1087 aaKnown RBP9.71□□□□□ -0.86
RFC4-212ENST00000479307 PUS10Q3MIT2 529 aaKnown RBP9.71□□□□□ -0.86
RFC4-212ENST00000479307 THSD4Q6ZMP0 1018 aa9.71□□□□□ -0.86
RFC4-212ENST00000479307 RETREG3Q86VR2 466 aa9.71□□□□□ -0.86
RFC4-212ENST00000479307 MTMR14Q8NCE2 650 aa9.71□□□□□ -0.86
RFC4-212ENST00000479307 CLUAP1Q96AJ1 413 aa9.71□□□□□ -0.86
RFC4-212ENST00000479307 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
RFC4-212ENST00000479307 HCSTQ9UBK5 93 aa9.7□□□□□ -0.86
RFC4-212ENST00000479307 NR1I2O75469 434 aa9.69□□□□□ -0.86
RFC4-212ENST00000479307 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
RFC4-212ENST00000479307 CFAP99D6REC4 459 aa9.68□□□□□ -0.86
RFC4-212ENST00000479307 DESI1Q6ICB0 168 aa9.68□□□□□ -0.86
RFC4-212ENST00000479307 PROSER2Q86WR7 435 aaPredicted RBP9.68□□□□□ -0.86
RFC4-212ENST00000479307 PRR7Q8TB68 274 aa9.68□□□□□ -0.86
RFC4-212ENST00000479307 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
RFC4-212ENST00000479307 TRAK2O60296 914 aa9.67□□□□□ -0.86
RFC4-212ENST00000479307 KCTD12Q96CX2 325 aaKnown RBP9.67□□□□□ -0.86
RFC4-212ENST00000479307 CTDSPL2Q05D32 466 aa9.66□□□□□ -0.86
RFC4-212ENST00000479307 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
RFC4-212ENST00000479307 TSC1Q92574 1164 aa9.66□□□□□ -0.86
RFC4-212ENST00000479307 SYMPKQ92797 1274 aaKnown RBP9.66□□□□□ -0.86
RFC4-212ENST00000479307 POM121Q96HA1 1249 aa9.66□□□□□ -0.86
RFC4-212ENST00000479307 ABCC9O60706 1549 aa9.66□□□□□ -0.86
RFC4-212ENST00000479307 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.86
RFC4-212ENST00000479307 BRICD5Q6PL45 260 aa9.65□□□□□ -0.86
RFC4-212ENST00000479307 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
RFC4-212ENST00000479307 USB1Q9BQ65 265 aaKnown RBP9.65□□□□□ -0.86
RFC4-212ENST00000479307 BLOC1S3Q6QNY0 202 aa9.64□□□□□ -0.87
RFC4-212ENST00000479307 RNF19BQ6ZMZ0 732 aa9.64□□□□□ -0.87
RFC4-212ENST00000479307 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
RFC4-212ENST00000479307 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
RFC4-212ENST00000479307 GJD4Q96KN9 370 aaPredicted RBP9.63□□□□□ -0.87
RFC4-212ENST00000479307 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
RFC4-212ENST00000479307 GDPD2Q9HCC8 539 aa9.62□□□□□ -0.87
RFC4-212ENST00000479307 HMX1Q9NP08 348 aaPredicted RBP9.61□□□□□ -0.87
RFC4-212ENST00000479307 MSS51Q4VC12 460 aa9.6□□□□□ -0.87
RFC4-212ENST00000479307 LRRN4Q8WUT4 740 aa9.6□□□□□ -0.87
RFC4-212ENST00000479307 TBC1D2BQ9UPU7 963 aa9.6□□□□□ -0.87
RFC4-212ENST00000479307 LYPD8Q6UX82 237 aa9.59□□□□□ -0.87
RFC4-212ENST00000479307 TRIM34Q9BYJ4 488 aa9.59□□□□□ -0.87
RFC4-212ENST00000479307 ABL2P42684 1182 aa9.58□□□□□ -0.88
RFC4-212ENST00000479307 ARXQ96QS3 562 aa9.58□□□□□ -0.88
RFC4-212ENST00000479307 SPSB2Q99619 263 aa9.58□□□□□ -0.88
RFC4-212ENST00000479307 PER1O15534 1290 aaPredicted RBP9.57□□□□□ -0.88
RFC4-212ENST00000479307 JUNDP17535 347 aa9.57□□□□□ -0.88
RFC4-212ENST00000479307 COPS2P61201 443 aa9.57□□□□□ -0.88
RFC4-212ENST00000479307 PNMA1Q8ND90 353 aa9.57□□□□□ -0.88
RFC4-212ENST00000479307 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
RFC4-212ENST00000479307 ARID3CA6NKF2 412 aa9.56□□□□□ -0.88
RFC4-212ENST00000479307 ZPR1O75312 459 aa9.56□□□□□ -0.88
RFC4-212ENST00000479307 PTPN5P54829 565 aa9.56□□□□□ -0.88
RFC4-212ENST00000479307 PTPRNQ16849 979 aa9.56□□□□□ -0.88
RFC4-212ENST00000479307 C1orf115Q9H7X2 142 aa9.56□□□□□ -0.88
RFC4-212ENST00000479307 WASHC4Q2M389 1173 aa9.55□□□□□ -0.88
RFC4-212ENST00000479307 MTRQ99707 1265 aa9.55□□□□□ -0.88
RFC4-212ENST00000479307 IL21Q9HBE4 155 aa9.55□□□□□ -0.88
RFC4-212ENST00000479307 ADH1BP00325 375 aa9.54□□□□□ -0.88
RFC4-212ENST00000479307 DXOO77932 396 aaKnown RBP9.53□□□□□ -0.88
RFC4-212ENST00000479307 MMP16P51512 607 aa9.53□□□□□ -0.88
RFC4-212ENST00000479307 NR6A1Q15406 480 aa9.53□□□□□ -0.88
RFC4-212ENST00000479307 ZNF777Q9ULD5 760 aaPredicted RBP9.53□□□□□ -0.88
RFC4-212ENST00000479307 GPR37L1O60883 481 aa9.52□□□□□ -0.89
RFC4-212ENST00000479307 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
RFC4-212ENST00000479307 IRF5Q13568 498 aa9.52□□□□□ -0.89
RFC4-212ENST00000479307 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
RFC4-212ENST00000479307 FAM160A2Q8N612 972 aaPredicted RBP9.52□□□□□ -0.89
RFC4-212ENST00000479307 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
RFC4-212ENST00000479307 CCNYL3P0C7X3 344 aa9.51□□□□□ -0.89
RFC4-212ENST00000479307 NUDT12Q9BQG2 462 aa9.5□□□□□ -0.89
RFC4-212ENST00000479307 ZC3H4Q9UPT8 1303 aaKnown RBP9.5□□□□□ -0.89
RFC4-212ENST00000479307 TLL1O43897 1013 aa9.49□□□□□ -0.89
RFC4-212ENST00000479307 EVA1BQ9NVM1 165 aa9.49□□□□□ -0.89
RFC4-212ENST00000479307 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
RFC4-212ENST00000479307 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
RFC4-212ENST00000479307 CCDC97Q96F63 343 aaPredicted RBP9.48□□□□□ -0.89
RFC4-212ENST00000479307 SLC6A16Q9GZN6 736 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 612.6 ms