RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 NEXMIFQ5QGS0 1516 aa5.54□□□□□ -1.52
USP25-208ENST00000478932 PPLO60437 1756 aa5.54□□□□□ -1.52
USP25-208ENST00000478932 IFT172Q9UG01 1749 aa5.54□□□□□ -1.52
USP25-208ENST00000478932 LRPPRCP42704 1394 aaKnown RBP5.54□□□□□ -1.52
USP25-208ENST00000478932 PREX1Q8TCU6 1659 aa5.53□□□□□ -1.52
USP25-208ENST00000478932 EVC2Q86UK5 1308 aa5.53□□□□□ -1.52
USP25-208ENST00000478932 KIAA1210Q9ULL0 1709 aa5.53□□□□□ -1.52
USP25-208ENST00000478932 MYO5BQ9ULV0 1848 aa5.53□□□□□ -1.52
USP25-208ENST00000478932 SBNO2Q9Y2G9 1366 aa5.53□□□□□ -1.52
USP25-208ENST00000478932 TMEM131LA2VDJ0 1609 aa5.53□□□□□ -1.52
USP25-208ENST00000478932 ABCB7O75027 752 aa5.53□□□□□ -1.52
USP25-208ENST00000478932 CLTCQ00610 1675 aaKnown RBP5.53□□□□□ -1.52
USP25-208ENST00000478932 ZC3H13Q5T200 1668 aaKnown RBP5.52□□□□□ -1.53
USP25-208ENST00000478932 ZFYVE9O95405 1425 aa5.52□□□□□ -1.53
USP25-208ENST00000478932 TXNDC2Q86VQ3 553 aa5.52□□□□□ -1.53
USP25-208ENST00000478932 CDCA7LQ96GN5 454 aa5.52□□□□□ -1.53
USP25-208ENST00000478932 A2ML1A8K2U0 1454 aa5.52□□□□□ -1.53
USP25-208ENST00000478932 SETBP1Q9Y6X0 1596 aa5.52□□□□□ -1.53
USP25-208ENST00000478932 LTKP29376 864 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 WDR43Q15061 677 aaKnown RBP eCLIP5.51□□□□□ -1.53
USP25-208ENST00000478932 MORC1Q86VD1 984 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 SLC26A8Q96RN1 970 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 REREQ9P2R6 1566 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 ARHGEF40Q8TER5 1519 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 YTHDC2Q9H6S0 1430 aaKnown RBP5.51□□□□□ -1.53
USP25-208ENST00000478932 RIMS2Q9UQ26 1411 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 METP08581 1390 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 CDK19Q9BWU1 502 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 CABP1Q9NZU7 370 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 ASXL1Q8IXJ9 1541 aa5.51□□□□□ -1.53
USP25-208ENST00000478932 TNRQ92752 1358 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 CCDC146Q8IYE0 955 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 NUDCQ9Y266 331 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 NSD3Q9BZ95 1437 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 PLEKHH1Q9ULM0 1364 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 MTHFSP49914 203 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 HDGFP51858 240 aaKnown RBP5.5□□□□□ -1.53
USP25-208ENST00000478932 GGNBP2Q9H3C7 697 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 CGNL1Q0VF96 1302 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 NCKAP5LQ9HCH0 1330 aa5.5□□□□□ -1.53
USP25-208ENST00000478932 KDM5AP29375 1690 aaKnown RBP5.49□□□□□ -1.53
USP25-208ENST00000478932 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.49□□□□□ -1.53
USP25-208ENST00000478932 FOXD4L1Q9NU39 408 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 SPATA31D1Q6ZQQ2 1576 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 ALKQ9UM73 1620 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 MYOM1P52179 1685 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 NPC1L1Q9UHC9 1359 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 NUTM2FA1L443 756 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 APAF1O14727 1248 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 FBLN1P23142 703 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 PTPRMP28827 1452 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 TMEM2Q9UHN6 1383 aa5.49□□□□□ -1.53
USP25-208ENST00000478932 FYB1O15117 783 aa5.48□□□□□ -1.53
USP25-208ENST00000478932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP25-208ENST00000478932 PUS7Q96PZ0 661 aaKnown RBP5.48□□□□□ -1.53
USP25-208ENST00000478932 RBM42Q9BTD8 480 aaKnown RBP5.48□□□□□ -1.53
USP25-208ENST00000478932 QRICH2Q9H0J4 1663 aa5.48□□□□□ -1.53
USP25-208ENST00000478932 TULP4Q9NRJ4 1543 aa5.48□□□□□ -1.53
USP25-208ENST00000478932 SMG6Q86US8 1419 aaKnown RBP5.48□□□□□ -1.53
USP25-208ENST00000478932 NEUROD2Q15784 382 aa5.48□□□□□ -1.53
USP25-208ENST00000478932 TERF2IPQ9NYB0 399 aa5.48□□□□□ -1.53
USP25-208ENST00000478932 A0A1W2PP64 1363 aa5.48□□□□□ -1.53
USP25-208ENST00000478932 EID1Q9Y6B2 187 aa5.47□□□□□ -1.53
USP25-208ENST00000478932 MYO3AQ8NEV4 1616 aa5.47□□□□□ -1.53
USP25-208ENST00000478932 ANKRD36BQ8N2N9 1353 aa5.47□□□□□ -1.53
USP25-208ENST00000478932 ABCC11Q96J66 1382 aa5.47□□□□□ -1.53
USP25-208ENST00000478932 WASLO00401 505 aaPredicted RBP5.47□□□□□ -1.53
USP25-208ENST00000478932 B4GALNT3Q6L9W6 998 aa5.47□□□□□ -1.53
USP25-208ENST00000478932 ARHGEF28Q8N1W1 1705 aaKnown RBP5.47□□□□□ -1.53
USP25-208ENST00000478932 PPM1GO15355 546 aaPredicted RBP5.46□□□□□ -1.53
USP25-208ENST00000478932 THEMISQ8N1K5 641 aaPredicted RBP5.46□□□□□ -1.53
USP25-208ENST00000478932 RCAN3Q9UKA8 241 aa5.46□□□□□ -1.53
USP25-208ENST00000478932 PDE3BQ13370 1112 aa5.46□□□□□ -1.54
USP25-208ENST00000478932 HDGFL2Q7Z4V5 671 aaPredicted RBP5.46□□□□□ -1.54
USP25-208ENST00000478932 NUDT16Q96DE0 195 aaKnown RBP5.46□□□□□ -1.54
USP25-208ENST00000478932 RRP7AQ9Y3A4 280 aaKnown RBP5.46□□□□□ -1.54
USP25-208ENST00000478932 ATAD2Q6PL18 1390 aa5.46□□□□□ -1.54
USP25-208ENST00000478932 PLIN1O60240 522 aa5.45□□□□□ -1.54
USP25-208ENST00000478932 U2AF1L5P0DN76 240 aaPredicted RBP5.45□□□□□ -1.54
USP25-208ENST00000478932 U2AF1Q01081 240 aaKnown RBP eCLIP5.45□□□□□ -1.54
USP25-208ENST00000478932 AMOTL2Q9Y2J4 779 aa5.45□□□□□ -1.54
USP25-208ENST00000478932 CCDC61Q9Y6R9 512 aa5.45□□□□□ -1.54
USP25-208ENST00000478932 ROBO2Q9HCK4 1378 aa5.45□□□□□ -1.54
USP25-208ENST00000478932 BLMP54132 1417 aaPredicted RBP5.45□□□□□ -1.54
USP25-208ENST00000478932 GOLGA2Q08379 1002 aa5.45□□□□□ -1.54
USP25-208ENST00000478932 PELP1Q8IZL8 1130 aaKnown RBP5.45□□□□□ -1.54
USP25-208ENST00000478932 RBM33Q96EV2 1170 aaKnown RBP5.45□□□□□ -1.54
USP25-208ENST00000478932 ZRANB1Q9UGI0 708 aa5.45□□□□□ -1.54
USP25-208ENST00000478932 U2SURPO15042 1029 aaKnown RBP5.44□□□□□ -1.54
USP25-208ENST00000478932 PPP4R2Q9NY27 417 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 CD163L1Q9NR16 1453 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 ADAMTS13Q76LX8 1427 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 POLR3AO14802 1390 aaPredicted RBP5.44□□□□□ -1.54
USP25-208ENST00000478932 RNF123Q5XPI4 1314 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 DUSP27Q5VZP5 1158 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 NME9Q86XW9 330 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 TCP11L2Q8N4U5 519 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 CFAP53Q96M91 514 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 ZNF521Q96K83 1311 aa5.44□□□□□ -1.54
USP25-208ENST00000478932 POLA2Q14181 598 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms