RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 PXDNQ92626 1479 aa19.52■□□□□ 0.72
HDAC8-217ENST00000478743 SF3B2Q13435 895 aaKnown RBP19.5■□□□□ 0.71
HDAC8-217ENST00000478743 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
HDAC8-217ENST00000478743 PLCH1Q4KWH8 1693 aa19.47■□□□□ 0.71
HDAC8-217ENST00000478743 R3HDM1Q15032 1099 aaKnown RBP19.47■□□□□ 0.71
HDAC8-217ENST00000478743 SEPT12Q8IYM1 358 aa19.47■□□□□ 0.71
HDAC8-217ENST00000478743 TNS1Q9HBL0 1735 aaKnown RBP19.46■□□□□ 0.71
HDAC8-217ENST00000478743 USP32Q8NFA0 1604 aa19.46■□□□□ 0.71
HDAC8-217ENST00000478743 XPCQ01831 940 aaPredicted RBP19.45■□□□□ 0.7
HDAC8-217ENST00000478743 UNC5CLQ8IV45 518 aa19.45■□□□□ 0.7
HDAC8-217ENST00000478743 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
HDAC8-217ENST00000478743 RGPD1P0DJD0 1748 aa19.44■□□□□ 0.7
HDAC8-217ENST00000478743 ANKRD50Q9ULJ7 1429 aa19.43■□□□□ 0.7
HDAC8-217ENST00000478743 CAMTA1Q9Y6Y1 1673 aa19.42■□□□□ 0.7
HDAC8-217ENST00000478743 ROBO2Q9HCK4 1378 aa19.42■□□□□ 0.7
HDAC8-217ENST00000478743 EN1Q05925 392 aaPredicted RBP19.41■□□□□ 0.7
HDAC8-217ENST00000478743 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
HDAC8-217ENST00000478743 BAG6P46379 1132 aa19.4■□□□□ 0.7
HDAC8-217ENST00000478743 ABCA3Q99758 1704 aa19.39■□□□□ 0.7
HDAC8-217ENST00000478743 IFFO2Q5TF58 517 aa19.39■□□□□ 0.69
HDAC8-217ENST00000478743 KRT27Q7Z3Y8 459 aa19.39■□□□□ 0.69
HDAC8-217ENST00000478743 NWD2Q9ULI1 1742 aa19.38■□□□□ 0.69
HDAC8-217ENST00000478743 CDC42BPGQ6DT37 1551 aa19.36■□□□□ 0.69
HDAC8-217ENST00000478743 NRAPQ86VF7 1730 aa19.35■□□□□ 0.69
HDAC8-217ENST00000478743 NPHP3Q7Z494 1330 aa19.34■□□□□ 0.69
HDAC8-217ENST00000478743 FAM182BQ5T319 152 aa19.34■□□□□ 0.69
HDAC8-217ENST00000478743 FOXO3O43524 673 aa19.33■□□□□ 0.68
HDAC8-217ENST00000478743 VPS72Q15906 364 aa19.33■□□□□ 0.68
HDAC8-217ENST00000478743 ONECUT3O60422 494 aaPredicted RBP19.32■□□□□ 0.68
HDAC8-217ENST00000478743 ESCO1Q5FWF5 840 aa19.32■□□□□ 0.68
HDAC8-217ENST00000478743 RREB1Q92766 1687 aa19.31■□□□□ 0.68
HDAC8-217ENST00000478743 DISP2A7MBM2 1401 aa19.31■□□□□ 0.68
HDAC8-217ENST00000478743 NUP188Q5SRE5 1749 aa19.31■□□□□ 0.68
HDAC8-217ENST00000478743 CLTCL1P53675 1640 aa19.3■□□□□ 0.68
HDAC8-217ENST00000478743 EZH2Q15910 746 aaKnown RBP19.3■□□□□ 0.68
HDAC8-217ENST00000478743 PRAG1Q86YV5 1406 aa19.3■□□□□ 0.68
HDAC8-217ENST00000478743 CCDC9Q9Y3X0 531 aaKnown RBP19.29■□□□□ 0.68
HDAC8-217ENST00000478743 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
HDAC8-217ENST00000478743 SENP3-EIF4A1A0A087X0R7 540 aa19.27■□□□□ 0.68
HDAC8-217ENST00000478743 SPATA31A3Q5VYP0 1347 aa19.26■□□□□ 0.67
HDAC8-217ENST00000478743 A0A0G2JS52 829 aa19.26■□□□□ 0.67
HDAC8-217ENST00000478743 PLEKHG5O94827 1062 aa19.26■□□□□ 0.67
HDAC8-217ENST00000478743 MYT1Q01538 1121 aa19.26■□□□□ 0.67
HDAC8-217ENST00000478743 CABLES1Q8TDN4 633 aa19.26■□□□□ 0.67
HDAC8-217ENST00000478743 THSD7AQ9UPZ6 1657 aa19.26■□□□□ 0.67
HDAC8-217ENST00000478743 NUTM2FA1L443 756 aa19.25■□□□□ 0.67
HDAC8-217ENST00000478743 FAM98CQ17RN3 349 aaKnown RBP19.25■□□□□ 0.67
HDAC8-217ENST00000478743 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
HDAC8-217ENST00000478743 HFM1A2PYH4 1435 aa19.23■□□□□ 0.67
HDAC8-217ENST00000478743 KIF1AQ12756 1690 aa19.23■□□□□ 0.67
HDAC8-217ENST00000478743 FMN2Q9NZ56 1722 aa19.22■□□□□ 0.67
HDAC8-217ENST00000478743 ZNF784Q8NCA9 323 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-217ENST00000478743 NAIPQ13075 1403 aa19.22■□□□□ 0.67
HDAC8-217ENST00000478743 CAMKK2Q96RR4 588 aa19.21■□□□□ 0.67
HDAC8-217ENST00000478743 RGPD8O14715 1765 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-217ENST00000478743 TNS3Q68CZ2 1445 aa19.19■□□□□ 0.66
HDAC8-217ENST00000478743 KIF1BO60333 1816 aa19.18■□□□□ 0.66
HDAC8-217ENST00000478743 NUP155O75694 1391 aa19.18■□□□□ 0.66
HDAC8-217ENST00000478743 UTRNP46939 3433 aa19.17■□□□□ 0.66
HDAC8-217ENST00000478743 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
HDAC8-217ENST00000478743 NINLQ9Y2I6 1382 aa19.17■□□□□ 0.66
HDAC8-217ENST00000478743 CCDC144AA2RUR9 1427 aa19.17■□□□□ 0.66
HDAC8-217ENST00000478743 FAM83GA6ND36 823 aa19.16■□□□□ 0.66
HDAC8-217ENST00000478743 NRKQ7Z2Y5 1582 aa19.15■□□□□ 0.66
HDAC8-217ENST00000478743 FAM50AQ14320 339 aaKnown RBP19.15■□□□□ 0.66
HDAC8-217ENST00000478743 HAP1P54257 671 aaPredicted RBP19.14■□□□□ 0.65
HDAC8-217ENST00000478743 IFT172Q9UG01 1749 aa19.14■□□□□ 0.65
HDAC8-217ENST00000478743 PPLO60437 1756 aa19.14■□□□□ 0.65
HDAC8-217ENST00000478743 TRIM37O94972 964 aa19.13■□□□□ 0.65
HDAC8-217ENST00000478743 C1QTNF8P60827 252 aa19.13■□□□□ 0.65
HDAC8-217ENST00000478743 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
HDAC8-217ENST00000478743 PPP1R1BQ9UD71 204 aaPredicted RBP19.13■□□□□ 0.65
HDAC8-217ENST00000478743 MYOM1P52179 1685 aa19.13■□□□□ 0.65
HDAC8-217ENST00000478743 COL14A1Q05707 1796 aaKnown RBP19.12■□□□□ 0.65
HDAC8-217ENST00000478743 PLEKHH1Q9ULM0 1364 aa19.12■□□□□ 0.65
HDAC8-217ENST00000478743 CASZ1Q86V15 1759 aa19.11■□□□□ 0.65
HDAC8-217ENST00000478743 WAPLQ7Z5K2 1190 aa19.1■□□□□ 0.65
HDAC8-217ENST00000478743 CRYBG1Q9Y4K1 1723 aa19.09■□□□□ 0.65
HDAC8-217ENST00000478743 BTG4Q9NY30 223 aa19.09■□□□□ 0.65
HDAC8-217ENST00000478743 KNDC1Q76NI1 1749 aa19.08■□□□□ 0.65
HDAC8-217ENST00000478743 APBA3O96018 575 aa19.08■□□□□ 0.64
HDAC8-217ENST00000478743 SPON1Q9HCB6 807 aa19.08■□□□□ 0.64
HDAC8-217ENST00000478743 TRPM3Q9HCF6 1732 aaPredicted RBP19.08■□□□□ 0.64
HDAC8-217ENST00000478743 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
HDAC8-217ENST00000478743 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
HDAC8-217ENST00000478743 KCNQ2O43526 872 aa19.07■□□□□ 0.64
HDAC8-217ENST00000478743 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
HDAC8-217ENST00000478743 CHD4Q14839 1912 aa19.06■□□□□ 0.64
HDAC8-217ENST00000478743 CEP350Q5VT06 3117 aa19.06■□□□□ 0.64
HDAC8-217ENST00000478743 ALS2Q96Q42 1657 aa19.05■□□□□ 0.64
HDAC8-217ENST00000478743 NRXN1Q9ULB1 1477 aa19.04■□□□□ 0.64
HDAC8-217ENST00000478743 DCAF8L1A6NGE4 600 aa19.04■□□□□ 0.64
HDAC8-217ENST00000478743 TECPR2O15040 1411 aa19.04■□□□□ 0.64
HDAC8-217ENST00000478743 LMOD2Q6P5Q4 547 aa19.04■□□□□ 0.64
HDAC8-217ENST00000478743 SBNO1A3KN83 1393 aa19.03■□□□□ 0.64
HDAC8-217ENST00000478743 ROCK1Q13464 1354 aa19.03■□□□□ 0.64
HDAC8-217ENST00000478743 PDGFDQ9GZP0 370 aaPredicted RBP19.01■□□□□ 0.63
HDAC8-217ENST00000478743 STK26Q9P289 416 aa19.01■□□□□ 0.63
HDAC8-217ENST00000478743 ARHGEF10O15013 1369 aa19■□□□□ 0.63
HDAC8-217ENST00000478743 RRBP1Q9P2E9 1410 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms