RNA–Protein interactions for RNA: ENST00000478687.5

VRK2-209, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,021 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-209ENST00000478687 ARAP3Q8WWN8 1544 aa9.31□□□□□ -0.92
VRK2-209ENST00000478687 RAPGEF3O95398 923 aa9.3□□□□□ -0.92
VRK2-209ENST00000478687 P3H3Q8IVL6 736 aa9.3□□□□□ -0.92
VRK2-209ENST00000478687 TATDN2Q93075 761 aa9.29□□□□□ -0.92
VRK2-209ENST00000478687 ATP10BO94823 1461 aa9.28□□□□□ -0.92
VRK2-209ENST00000478687 ADAMTSL3P82987 1691 aa9.28□□□□□ -0.92
VRK2-209ENST00000478687 CERKQ8TCT0 537 aa9.27□□□□□ -0.93
VRK2-209ENST00000478687 EMID1Q96A84 441 aaPredicted RBP9.27□□□□□ -0.93
VRK2-209ENST00000478687 ARID4BQ4LE39 1312 aaPredicted RBP9.27□□□□□ -0.93
VRK2-209ENST00000478687 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.93
VRK2-209ENST00000478687 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
VRK2-209ENST00000478687 TMUB1Q9BVT8 246 aa9.26□□□□□ -0.93
VRK2-209ENST00000478687 MADDQ8WXG6 1647 aa9.26□□□□□ -0.93
VRK2-209ENST00000478687 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
VRK2-209ENST00000478687 PCF11O94913 1555 aaKnown RBP9.25□□□□□ -0.93
VRK2-209ENST00000478687 FAM9AQ8IZU1 332 aaPredicted RBP9.25□□□□□ -0.93
VRK2-209ENST00000478687 PNMA3Q9UL41 463 aa9.25□□□□□ -0.93
VRK2-209ENST00000478687 LMTK3Q96Q04 1460 aa9.25□□□□□ -0.93
VRK2-209ENST00000478687 BCORL1Q5H9F3 1711 aa9.25□□□□□ -0.93
VRK2-209ENST00000478687 PHLDB1Q86UU1 1377 aa9.24□□□□□ -0.93
VRK2-209ENST00000478687 FRMPD1Q5SYB0 1578 aa9.24□□□□□ -0.93
VRK2-209ENST00000478687 RBM27Q9P2N5 1060 aaKnown RBP9.24□□□□□ -0.93
VRK2-209ENST00000478687 NEO1Q92859 1461 aa9.23□□□□□ -0.93
VRK2-209ENST00000478687 SPDYE16A6NNV3 312 aaPredicted RBP9.23□□□□□ -0.93
VRK2-209ENST00000478687 LCE2AQ5TA79 106 aaPredicted RBP9.23□□□□□ -0.93
VRK2-209ENST00000478687 TTC13Q8NBP0 860 aa9.23□□□□□ -0.93
VRK2-209ENST00000478687 HSPA2P54652 639 aa9.22□□□□□ -0.93
VRK2-209ENST00000478687 RAPGEF6Q8TEU7 1601 aa9.21□□□□□ -0.93
VRK2-209ENST00000478687 RIMS1Q86UR5 1692 aaKnown RBP9.21□□□□□ -0.93
VRK2-209ENST00000478687 RANGAP1P46060 587 aaPredicted RBP9.21□□□□□ -0.94
VRK2-209ENST00000478687 MYT1Q01538 1121 aa9.21□□□□□ -0.94
VRK2-209ENST00000478687 NUDT18Q6ZVK8 323 aa9.21□□□□□ -0.94
VRK2-209ENST00000478687 SAMD9Q5K651 1589 aa9.2□□□□□ -0.94
VRK2-209ENST00000478687 GGCXP38435 758 aa9.2□□□□□ -0.94
VRK2-209ENST00000478687 CDHR5Q9HBB8 845 aa9.2□□□□□ -0.94
VRK2-209ENST00000478687 ARHGEF40Q8TER5 1519 aa9.2□□□□□ -0.94
VRK2-209ENST00000478687 POTECB2RU33 542 aa9.19□□□□□ -0.94
VRK2-209ENST00000478687 ZPR1O75312 459 aa9.19□□□□□ -0.94
VRK2-209ENST00000478687 PRR20EP86478 221 aa9.19□□□□□ -0.94
VRK2-209ENST00000478687 PRR20CP86479 221 aa9.19□□□□□ -0.94
VRK2-209ENST00000478687 PRR20DP86480 221 aa9.19□□□□□ -0.94
VRK2-209ENST00000478687 PRR20BP86481 221 aa9.19□□□□□ -0.94
VRK2-209ENST00000478687 PRR20AP86496 221 aa9.19□□□□□ -0.94
VRK2-209ENST00000478687 ARIH1Q9Y4X5 557 aaPredicted RBP9.19□□□□□ -0.94
VRK2-209ENST00000478687 NUP153P49790 1475 aaKnown RBP9.19□□□□□ -0.94
VRK2-209ENST00000478687 DENND4BO75064 1496 aaPredicted RBP9.18□□□□□ -0.94
VRK2-209ENST00000478687 COPS2P61201 443 aa9.18□□□□□ -0.94
VRK2-209ENST00000478687 RICTORQ6R327 1708 aa9.17□□□□□ -0.94
VRK2-209ENST00000478687 AKNAQ7Z591 1439 aa9.17□□□□□ -0.94
VRK2-209ENST00000478687 RNF223E7ERA6 249 aa9.17□□□□□ -0.94
VRK2-209ENST00000478687 DGAT1O75907 488 aa9.17□□□□□ -0.94
VRK2-209ENST00000478687 MLECQ14165 292 aa9.17□□□□□ -0.94
VRK2-209ENST00000478687 NECTIN2Q92692 538 aa9.17□□□□□ -0.94
VRK2-209ENST00000478687 SIGLEC1Q9BZZ2 1709 aa9.17□□□□□ -0.94
VRK2-209ENST00000478687 FANCAO15360 1455 aa9.16□□□□□ -0.94
VRK2-209ENST00000478687 FHOD3Q2V2M9 1422 aa9.16□□□□□ -0.94
VRK2-209ENST00000478687 PLEKHD1A6NEE1 506 aa9.16□□□□□ -0.94
VRK2-209ENST00000478687 OSBPP22059 807 aa9.16□□□□□ -0.94
VRK2-209ENST00000478687 SWT1Q5T5J6 900 aaKnown RBP9.16□□□□□ -0.94
VRK2-209ENST00000478687 YEATS2Q9ULM3 1422 aa9.15□□□□□ -0.94
VRK2-209ENST00000478687 RNF40O75150 1001 aa9.15□□□□□ -0.94
VRK2-209ENST00000478687 SPRYD7Q5W111 196 aa9.15□□□□□ -0.94
VRK2-209ENST00000478687 ZFYVE16Q7Z3T8 1539 aa9.15□□□□□ -0.95
VRK2-209ENST00000478687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.15□□□□□ -0.95
VRK2-209ENST00000478687 POGZQ7Z3K3 1410 aa9.14□□□□□ -0.95
VRK2-209ENST00000478687 SLC19A1P41440 591 aa9.14□□□□□ -0.95
VRK2-209ENST00000478687 SLF2Q8IX21 1173 aa9.14□□□□□ -0.95
VRK2-209ENST00000478687 NPDC1Q9NQX5 325 aaPredicted RBP9.14□□□□□ -0.95
VRK2-209ENST00000478687 TTC37Q6PGP7 1564 aa9.14□□□□□ -0.95
VRK2-209ENST00000478687 CFAP74Q9C0B2 1584 aa9.13□□□□□ -0.95
VRK2-209ENST00000478687 HDGFP51858 240 aaKnown RBP9.13□□□□□ -0.95
VRK2-209ENST00000478687 ZNF598Q86UK7 904 aaKnown RBP9.13□□□□□ -0.95
VRK2-209ENST00000478687 ZMYM4Q5VZL5 1548 aa9.13□□□□□ -0.95
VRK2-209ENST00000478687 EFCAB5A4FU69 1503 aa9.12□□□□□ -0.95
VRK2-209ENST00000478687 GDF9O60383 454 aa9.12□□□□□ -0.95
VRK2-209ENST00000478687 PKDCCQ504Y2 493 aa9.12□□□□□ -0.95
VRK2-209ENST00000478687 HECW1Q76N89 1606 aa9.12□□□□□ -0.95
VRK2-209ENST00000478687 FER1L4A9Z1Z3 1794 aa9.12□□□□□ -0.95
VRK2-209ENST00000478687 EYA1Q99502 592 aa9.11□□□□□ -0.95
VRK2-209ENST00000478687 MAGI2Q86UL8 1455 aa9.1□□□□□ -0.95
VRK2-209ENST00000478687 CEBPAP49715 358 aaPredicted RBP9.1□□□□□ -0.95
VRK2-209ENST00000478687 ANKLE1Q8NAG6 615 aa9.1□□□□□ -0.95
VRK2-209ENST00000478687 SCAPERQ9BY12 1400 aa9.1□□□□□ -0.95
VRK2-209ENST00000478687 DISP3Q9P2K9 1392 aa9.1□□□□□ -0.95
VRK2-209ENST00000478687 CDK13Q14004 1512 aaKnown RBP9.1□□□□□ -0.95
VRK2-209ENST00000478687 GRXCR2A6NFK2 248 aa9.09□□□□□ -0.95
VRK2-209ENST00000478687 BLOC1S3Q6QNY0 202 aa9.09□□□□□ -0.95
VRK2-209ENST00000478687 PADI6Q6TGC4 694 aa9.09□□□□□ -0.95
VRK2-209ENST00000478687 TREML4Q6UXN2 200 aa9.09□□□□□ -0.95
VRK2-209ENST00000478687 LIAT1Q6ZQX7 453 aa9.09□□□□□ -0.95
VRK2-209ENST00000478687 ILDR2Q71H61 639 aa9.09□□□□□ -0.95
VRK2-209ENST00000478687 TLL1O43897 1013 aa9.08□□□□□ -0.96
VRK2-209ENST00000478687 PCDHB3Q9Y5E6 796 aa9.08□□□□□ -0.96
VRK2-209ENST00000478687 ARHGEF12Q9NZN5 1544 aa9.08□□□□□ -0.96
VRK2-209ENST00000478687 PREX1Q8TCU6 1659 aa9.07□□□□□ -0.96
VRK2-209ENST00000478687 PLCH2O75038 1416 aa9.07□□□□□ -0.96
VRK2-209ENST00000478687 PRR14Q9BWN1 585 aa9.07□□□□□ -0.96
VRK2-209ENST00000478687 ATP10AO60312 1499 aa9.07□□□□□ -0.96
VRK2-209ENST00000478687 C9orf84Q5VXU9 1444 aa9.06□□□□□ -0.96
VRK2-209ENST00000478687 ATP1B4Q9UN42 357 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms