RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 TMEM132EQ6IEE7 984 aa10.89□□□□□ -0.67
MSL3-214ENST00000478462 TIMELESSQ9UNS1 1208 aa10.89□□□□□ -0.67
MSL3-214ENST00000478462 PROSER2Q86WR7 435 aaPredicted RBP10.88□□□□□ -0.67
MSL3-214ENST00000478462 PRAG1Q86YV5 1406 aa10.88□□□□□ -0.67
MSL3-214ENST00000478462 STK26Q9P289 416 aa10.88□□□□□ -0.67
MSL3-214ENST00000478462 KIAA1210Q9ULL0 1709 aa10.87□□□□□ -0.67
MSL3-214ENST00000478462 SLC24A1O60721 1099 aa10.87□□□□□ -0.67
MSL3-214ENST00000478462 CPS1P31327 1500 aa10.87□□□□□ -0.67
MSL3-214ENST00000478462 LTBP4Q8N2S1 1624 aa10.87□□□□□ -0.67
MSL3-214ENST00000478462 NWD1Q149M9 1564 aa10.86□□□□□ -0.67
MSL3-214ENST00000478462 PTPRUQ92729 1446 aa10.85□□□□□ -0.67
MSL3-214ENST00000478462 NBPF8Q3BBV2 869 aa10.85□□□□□ -0.67
MSL3-214ENST00000478462 C14orf37Q86TY3 774 aa10.85□□□□□ -0.67
MSL3-214ENST00000478462 CERKQ8TCT0 537 aa10.85□□□□□ -0.67
MSL3-214ENST00000478462 YTHDC2Q9H6S0 1430 aaKnown RBP10.84□□□□□ -0.67
MSL3-214ENST00000478462 XRN1Q8IZH2 1706 aaKnown RBP10.84□□□□□ -0.67
MSL3-214ENST00000478462 NBPF1Q3BBV0 1214 aa10.84□□□□□ -0.67
MSL3-214ENST00000478462 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
MSL3-214ENST00000478462 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
MSL3-214ENST00000478462 LRPPRCP42704 1394 aaKnown RBP10.84□□□□□ -0.67
MSL3-214ENST00000478462 NKTRP30414 1462 aaKnown RBP10.84□□□□□ -0.67
MSL3-214ENST00000478462 XIRP1Q702N8 1843 aaKnown RBP10.84□□□□□ -0.67
MSL3-214ENST00000478462 TRPM1Q7Z4N2 1603 aa10.84□□□□□ -0.67
MSL3-214ENST00000478462 LRRC7Q96NW7 1537 aa10.84□□□□□ -0.67
MSL3-214ENST00000478462 PITPNM1O00562 1244 aa10.83□□□□□ -0.68
MSL3-214ENST00000478462 TRAK1Q9UPV9 953 aa10.83□□□□□ -0.68
MSL3-214ENST00000478462 SSUH2Q9Y2M2 353 aa10.83□□□□□ -0.68
MSL3-214ENST00000478462 ASXL1Q8IXJ9 1541 aa10.83□□□□□ -0.68
MSL3-214ENST00000478462 ROCK2O75116 1388 aaKnown RBP10.82□□□□□ -0.68
MSL3-214ENST00000478462 TMEM94Q12767 1356 aa10.82□□□□□ -0.68
MSL3-214ENST00000478462 ABCC11Q96J66 1382 aa10.82□□□□□ -0.68
MSL3-214ENST00000478462 KNDC1Q76NI1 1749 aa10.82□□□□□ -0.68
MSL3-214ENST00000478462 POGKQ9P215 609 aa10.82□□□□□ -0.68
MSL3-214ENST00000478462 ADGRB1O14514 1584 aa10.82□□□□□ -0.68
MSL3-214ENST00000478462 ROBO2Q9HCK4 1378 aa10.81□□□□□ -0.68
MSL3-214ENST00000478462 FXR2P51116 673 aaKnown RBP eCLIP10.81□□□□□ -0.68
MSL3-214ENST00000478462 WAPLQ7Z5K2 1190 aa10.81□□□□□ -0.68
MSL3-214ENST00000478462 SIRT1Q96EB6 747 aa10.8□□□□□ -0.68
MSL3-214ENST00000478462 PRAM1Q96QH2 718 aa10.8□□□□□ -0.68
MSL3-214ENST00000478462 CARD11Q9BXL7 1154 aa10.8□□□□□ -0.68
MSL3-214ENST00000478462 PTCH1Q13635 1447 aa10.8□□□□□ -0.68
MSL3-214ENST00000478462 MSH6P52701 1360 aa10.79□□□□□ -0.68
MSL3-214ENST00000478462 TECPR2O15040 1411 aa10.79□□□□□ -0.68
MSL3-214ENST00000478462 NCOA3Q9Y6Q9 1424 aa10.79□□□□□ -0.68
MSL3-214ENST00000478462 SAFB2Q14151 953 aaKnown RBP eCLIP10.79□□□□□ -0.68
MSL3-214ENST00000478462 C19orf44Q9H6X5 657 aa10.79□□□□□ -0.68
MSL3-214ENST00000478462 IQSEC2Q5JU85 1478 aa10.79□□□□□ -0.68
MSL3-214ENST00000478462 ATF3P18847 181 aa10.78□□□□□ -0.68
MSL3-214ENST00000478462 RALGAPBQ86X10 1494 aa10.78□□□□□ -0.68
MSL3-214ENST00000478462 DLC1Q96QB1 1528 aa10.78□□□□□ -0.68
MSL3-214ENST00000478462 ARHGEF28Q8N1W1 1705 aaKnown RBP10.78□□□□□ -0.68
MSL3-214ENST00000478462 FAM135BQ49AJ0 1406 aa10.77□□□□□ -0.68
MSL3-214ENST00000478462 UBAP1LF5GYI3 381 aa10.77□□□□□ -0.69
MSL3-214ENST00000478462 TOM1O60784 492 aa10.77□□□□□ -0.69
MSL3-214ENST00000478462 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.77□□□□□ -0.69
MSL3-214ENST00000478462 PLEKHH1Q9ULM0 1364 aa10.77□□□□□ -0.69
MSL3-214ENST00000478462 NALCNQ8IZF0 1738 aa10.76□□□□□ -0.69
MSL3-214ENST00000478462 CADPS2Q86UW7 1296 aa10.76□□□□□ -0.69
MSL3-214ENST00000478462 PROM2Q8N271 834 aa10.76□□□□□ -0.69
MSL3-214ENST00000478462 EIF3AQ14152 1382 aaKnown RBP10.76□□□□□ -0.69
MSL3-214ENST00000478462 GPRASP1Q5JY77 1395 aa10.76□□□□□ -0.69
MSL3-214ENST00000478462 MINK1Q8N4C8 1332 aaPredicted RBP10.75□□□□□ -0.69
MSL3-214ENST00000478462 CENPJQ9HC77 1338 aaPredicted RBP10.75□□□□□ -0.69
MSL3-214ENST00000478462 ADGRL3Q9HAR2 1447 aa10.75□□□□□ -0.69
MSL3-214ENST00000478462 HIRIP3Q9BW71 556 aaPredicted RBP10.74□□□□□ -0.69
MSL3-214ENST00000478462 QRICH2Q9H0J4 1663 aa10.73□□□□□ -0.69
MSL3-214ENST00000478462 PIP4K2BP78356 416 aa10.73□□□□□ -0.69
MSL3-214ENST00000478462 SLAIN2Q9P270 581 aa10.73□□□□□ -0.69
MSL3-214ENST00000478462 DCCP43146 1447 aa10.72□□□□□ -0.69
MSL3-214ENST00000478462 RGPD8O14715 1765 aaPredicted RBP10.72□□□□□ -0.69
MSL3-214ENST00000478462 NUTM2FA1L443 756 aa10.71□□□□□ -0.69
MSL3-214ENST00000478462 ZEB1P37275 1124 aaPredicted RBP10.71□□□□□ -0.69
MSL3-214ENST00000478462 USP47Q96K76 1375 aa10.71□□□□□ -0.69
MSL3-214ENST00000478462 CDC42BPGQ6DT37 1551 aa10.7□□□□□ -0.7
MSL3-214ENST00000478462 ST20-MTHFSA0A0A6YYL1 179 aa10.7□□□□□ -0.7
MSL3-214ENST00000478462 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
MSL3-214ENST00000478462 FBXO41Q8TF61 875 aa10.7□□□□□ -0.7
MSL3-214ENST00000478462 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
MSL3-214ENST00000478462 CDK19Q9BWU1 502 aa10.69□□□□□ -0.7
MSL3-214ENST00000478462 FMN2Q9NZ56 1722 aa10.69□□□□□ -0.7
MSL3-214ENST00000478462 ADGRB2O60241 1585 aa10.69□□□□□ -0.7
MSL3-214ENST00000478462 EVC2Q86UK5 1308 aa10.68□□□□□ -0.7
MSL3-214ENST00000478462 VASPP50552 380 aaPredicted RBP10.68□□□□□ -0.7
MSL3-214ENST00000478462 SRPK2P78362 688 aaKnown RBP10.68□□□□□ -0.7
MSL3-214ENST00000478462 ESCO1Q5FWF5 840 aa10.68□□□□□ -0.7
MSL3-214ENST00000478462 MST1RQ04912 1400 aa10.67□□□□□ -0.7
MSL3-214ENST00000478462 ROBO1Q9Y6N7 1651 aa10.67□□□□□ -0.7
MSL3-214ENST00000478462 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
MSL3-214ENST00000478462 CABP2Q9NPB3 220 aa10.66□□□□□ -0.7
MSL3-214ENST00000478462 CLEC11AQ9Y240 323 aa10.66□□□□□ -0.7
MSL3-214ENST00000478462 C1orf167Q5SNV9 1468 aa10.66□□□□□ -0.7
MSL3-214ENST00000478462 ITSN1Q15811 1721 aa10.65□□□□□ -0.7
MSL3-214ENST00000478462 HSPA5P11021 654 aaKnown RBP10.65□□□□□ -0.7
MSL3-214ENST00000478462 BRINP3Q76B58 766 aa10.65□□□□□ -0.7
MSL3-214ENST00000478462 SPDYE1Q8NFV5 336 aaPredicted RBP10.65□□□□□ -0.7
MSL3-214ENST00000478462 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.7
MSL3-214ENST00000478462 SBNO2Q9Y2G9 1366 aa10.65□□□□□ -0.71
MSL3-214ENST00000478462 TULP4Q9NRJ4 1543 aa10.64□□□□□ -0.71
MSL3-214ENST00000478462 TMF1P82094 1093 aa10.64□□□□□ -0.71
MSL3-214ENST00000478462 TESK2Q96S53 571 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms