RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 MSH6P52701 1360 aa25.75■■□□□ 1.71
PLOD3-213ENST00000478264 FBXO41Q8TF61 875 aa25.75■■□□□ 1.71
PLOD3-213ENST00000478264 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.74■■□□□ 1.71
PLOD3-213ENST00000478264 CENPJQ9HC77 1338 aaPredicted RBP25.74■■□□□ 1.71
PLOD3-213ENST00000478264 USP47Q96K76 1375 aa25.73■■□□□ 1.71
PLOD3-213ENST00000478264 DCCP43146 1447 aa25.72■■□□□ 1.71
PLOD3-213ENST00000478264 QRICH2Q9H0J4 1663 aa25.72■■□□□ 1.71
PLOD3-213ENST00000478264 ADGRB2O60241 1585 aa25.72■■□□□ 1.71
PLOD3-213ENST00000478264 CDC42BPGQ6DT37 1551 aa25.71■■□□□ 1.71
PLOD3-213ENST00000478264 SAFB2Q14151 953 aaKnown RBP eCLIP25.71■■□□□ 1.71
PLOD3-213ENST00000478264 C19orf44Q9H6X5 657 aa25.71■■□□□ 1.71
PLOD3-213ENST00000478264 SBNO2Q9Y2G9 1366 aa25.67■■□□□ 1.7
PLOD3-213ENST00000478264 MINK1Q8N4C8 1332 aaPredicted RBP25.65■■□□□ 1.7
PLOD3-213ENST00000478264 CADPS2Q86UW7 1296 aa25.65■■□□□ 1.7
PLOD3-213ENST00000478264 ATF3P18847 181 aa25.64■■□□□ 1.7
PLOD3-213ENST00000478264 ST20-MTHFSA0A0A6YYL1 179 aa25.63■■□□□ 1.69
PLOD3-213ENST00000478264 EIF4G2P78344 907 aaKnown RBP eCLIP25.63■■□□□ 1.69
PLOD3-213ENST00000478264 HIRIP3Q9BW71 556 aaPredicted RBP25.62■■□□□ 1.69
PLOD3-213ENST00000478264 FMN2Q9NZ56 1722 aa25.61■■□□□ 1.69
PLOD3-213ENST00000478264 TOM1O60784 492 aa25.59■■□□□ 1.69
PLOD3-213ENST00000478264 MST1RQ04912 1400 aa25.59■■□□□ 1.69
PLOD3-213ENST00000478264 TULP4Q9NRJ4 1543 aa25.58■■□□□ 1.69
PLOD3-213ENST00000478264 WASLO00401 505 aaPredicted RBP25.58■■□□□ 1.69
PLOD3-213ENST00000478264 SLC24A1O60721 1099 aa25.57■■□□□ 1.68
PLOD3-213ENST00000478264 UBAP1LF5GYI3 381 aa25.56■■□□□ 1.68
PLOD3-213ENST00000478264 HSPA5P11021 654 aaKnown RBP25.56■■□□□ 1.68
PLOD3-213ENST00000478264 TESK2Q96S53 571 aa25.56■■□□□ 1.68
PLOD3-213ENST00000478264 EVC2Q86UK5 1308 aa25.55■■□□□ 1.68
PLOD3-213ENST00000478264 ANKARQ7Z5J8 1434 aa25.54■■□□□ 1.68
PLOD3-213ENST00000478264 C1orf167Q5SNV9 1468 aa25.54■■□□□ 1.68
PLOD3-213ENST00000478264 CDK19Q9BWU1 502 aa25.52■■□□□ 1.68
PLOD3-213ENST00000478264 SLAIN2Q9P270 581 aa25.52■■□□□ 1.68
PLOD3-213ENST00000478264 USP32Q8NFA0 1604 aa25.52■■□□□ 1.68
PLOD3-213ENST00000478264 ATP7BP35670 1465 aa25.51■■□□□ 1.67
PLOD3-213ENST00000478264 SRPK2P78362 688 aaKnown RBP25.5■■□□□ 1.67
PLOD3-213ENST00000478264 TMF1P82094 1093 aa25.49■■□□□ 1.67
PLOD3-213ENST00000478264 NUTM2FA1L443 756 aa25.48■■□□□ 1.67
PLOD3-213ENST00000478264 ITSN1Q15811 1721 aa25.47■■□□□ 1.67
PLOD3-213ENST00000478264 DISP3Q9P2K9 1392 aa25.46■■□□□ 1.67
PLOD3-213ENST00000478264 TOPAZ1Q8N9V7 1692 aa25.46■■□□□ 1.67
PLOD3-213ENST00000478264 ROBO1Q9Y6N7 1651 aa25.46■■□□□ 1.67
PLOD3-213ENST00000478264 PRR36Q9H6K5 1346 aa25.46■■□□□ 1.67
PLOD3-213ENST00000478264 CABP2Q9NPB3 220 aa25.46■■□□□ 1.67
PLOD3-213ENST00000478264 ATAD2Q6PL18 1390 aa25.44■■□□□ 1.66
PLOD3-213ENST00000478264 PIP4K2BP78356 416 aa25.44■■□□□ 1.66
PLOD3-213ENST00000478264 NUDT16Q96DE0 195 aaKnown RBP25.44■■□□□ 1.66
PLOD3-213ENST00000478264 PUS7Q96PZ0 661 aaKnown RBP25.44■■□□□ 1.66
PLOD3-213ENST00000478264 KIF1AQ12756 1690 aa25.44■■□□□ 1.66
PLOD3-213ENST00000478264 RGPD8O14715 1765 aaPredicted RBP25.44■■□□□ 1.66
PLOD3-213ENST00000478264 SCAF1Q9H7N4 1312 aaKnown RBP25.43■■□□□ 1.66
PLOD3-213ENST00000478264 CDCA8Q53HL2 280 aa25.43■■□□□ 1.66
PLOD3-213ENST00000478264 BRINP3Q76B58 766 aa25.43■■□□□ 1.66
PLOD3-213ENST00000478264 ESCO1Q5FWF5 840 aa25.42■■□□□ 1.66
PLOD3-213ENST00000478264 ORAI2Q96SN7 254 aa25.41■■□□□ 1.66
PLOD3-213ENST00000478264 CCDC61Q9Y6R9 512 aa25.41■■□□□ 1.66
PLOD3-213ENST00000478264 PPIP5K1Q6PFW1 1433 aa25.39■■□□□ 1.66
PLOD3-213ENST00000478264 PHF8Q9UPP1 1060 aa25.38■■□□□ 1.65
PLOD3-213ENST00000478264 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
PLOD3-213ENST00000478264 AHDC1Q5TGY3 1603 aaPredicted RBP25.36■■□□□ 1.65
PLOD3-213ENST00000478264 NINLQ9Y2I6 1382 aa25.35■■□□□ 1.65
PLOD3-213ENST00000478264 PLEKHG3A1L390 1219 aa25.33■■□□□ 1.65
PLOD3-213ENST00000478264 PMFBP1Q8TBY8 1022 aa25.33■■□□□ 1.65
PLOD3-213ENST00000478264 NPHP3Q7Z494 1330 aa25.33■■□□□ 1.64
PLOD3-213ENST00000478264 CABP1Q9NZU7 370 aa25.32■■□□□ 1.64
PLOD3-213ENST00000478264 POLR3AO14802 1390 aaPredicted RBP25.31■■□□□ 1.64
PLOD3-213ENST00000478264 MYOM1P52179 1685 aa25.29■■□□□ 1.64
PLOD3-213ENST00000478264 PHLPP1O60346 1717 aa25.29■■□□□ 1.64
PLOD3-213ENST00000478264 C11orf95C9JLR9 678 aaPredicted RBP25.29■■□□□ 1.64
PLOD3-213ENST00000478264 FOXO3O43524 673 aa25.29■■□□□ 1.64
PLOD3-213ENST00000478264 NGDNQ8NEJ9 315 aaKnown RBP25.29■■□□□ 1.64
PLOD3-213ENST00000478264 TMC1Q8TDI8 760 aa25.29■■□□□ 1.64
PLOD3-213ENST00000478264 ACEP12821 1306 aa25.28■■□□□ 1.64
PLOD3-213ENST00000478264 KIF7Q2M1P5 1343 aa25.28■■□□□ 1.64
PLOD3-213ENST00000478264 PXDNQ92626 1479 aa25.28■■□□□ 1.64
PLOD3-213ENST00000478264 POLR3GLQ9BT43 218 aa25.27■■□□□ 1.64
PLOD3-213ENST00000478264 DDX17Q92841 729 aaKnown RBP25.26■■□□□ 1.63
PLOD3-213ENST00000478264 COL16A1Q07092 1604 aaPredicted RBP25.26■■□□□ 1.63
PLOD3-213ENST00000478264 SLC12A5Q9H2X9 1139 aa25.25■■□□□ 1.63
PLOD3-213ENST00000478264 SOS2Q07890 1332 aaPredicted RBP25.25■■□□□ 1.63
PLOD3-213ENST00000478264 CCDC7Q96M83 1385 aa25.25■■□□□ 1.63
PLOD3-213ENST00000478264 CD163L1Q9NR16 1453 aa25.25■■□□□ 1.63
PLOD3-213ENST00000478264 AKAP12Q02952 1782 aa25.25■■□□□ 1.63
PLOD3-213ENST00000478264 CPSF1Q10570 1443 aaKnown RBP25.24■■□□□ 1.63
PLOD3-213ENST00000478264 PSME1Q06323 249 aa25.24■■□□□ 1.63
PLOD3-213ENST00000478264 WASHC2AQ641Q2 1341 aa25.23■■□□□ 1.63
PLOD3-213ENST00000478264 USP6P35125 1406 aa25.22■■□□□ 1.63
PLOD3-213ENST00000478264 ANKRD36BQ8N2N9 1353 aa25.22■■□□□ 1.63
PLOD3-213ENST00000478264 KRT28Q7Z3Y7 464 aa25.22■■□□□ 1.63
PLOD3-213ENST00000478264 HDGFL2Q7Z4V5 671 aaPredicted RBP25.22■■□□□ 1.63
PLOD3-213ENST00000478264 ZNF692Q9BU19 519 aaPredicted RBP25.22■■□□□ 1.63
PLOD3-213ENST00000478264 TERF2IPQ9NYB0 399 aa25.22■■□□□ 1.63
PLOD3-213ENST00000478264 MON2Q7Z3U7 1717 aa25.22■■□□□ 1.63
PLOD3-213ENST00000478264 A0A1W2PP64 1363 aa25.21■■□□□ 1.63
PLOD3-213ENST00000478264 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
PLOD3-213ENST00000478264 TRPM3Q9HCF6 1732 aaPredicted RBP25.21■■□□□ 1.63
PLOD3-213ENST00000478264 HSPA1LP34931 641 aa25.21■■□□□ 1.63
PLOD3-213ENST00000478264 XPCQ01831 940 aaPredicted RBP25.21■■□□□ 1.63
PLOD3-213ENST00000478264 SBNO1A3KN83 1393 aa25.19■■□□□ 1.62
PLOD3-213ENST00000478264 KTN1Q86UP2 1357 aaKnown RBP25.19■■□□□ 1.62
PLOD3-213ENST00000478264 NRKQ7Z2Y5 1582 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms