RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 NLRP6P59044 892 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 B4GALNT3Q6L9W6 998 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 ABTB2Q8N961 1025 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 MRS2Q9HD23 443 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 SLAIN2Q9P270 581 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 USP47Q96K76 1375 aa10.18□□□□□ -0.78
SYCP3-204ENST00000478139 PRDM15P57071 1507 aaPredicted RBP10.17□□□□□ -0.78
SYCP3-204ENST00000478139 LRPPRCP42704 1394 aaKnown RBP10.17□□□□□ -0.78
SYCP3-204ENST00000478139 FANCIQ9NVI1 1328 aa10.17□□□□□ -0.78
SYCP3-204ENST00000478139 AMPHP49418 695 aa10.17□□□□□ -0.78
SYCP3-204ENST00000478139 MORC1Q86VD1 984 aa10.17□□□□□ -0.78
SYCP3-204ENST00000478139 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
SYCP3-204ENST00000478139 PRKRIP1Q9H875 184 aaPredicted RBP10.17□□□□□ -0.78
SYCP3-204ENST00000478139 GCC2Q8IWJ2 1684 aa10.16□□□□□ -0.78
SYCP3-204ENST00000478139 NPHP3Q7Z494 1330 aa10.16□□□□□ -0.78
SYCP3-204ENST00000478139 NBPF8Q3BBV2 869 aa10.16□□□□□ -0.78
SYCP3-204ENST00000478139 COG3Q96JB2 828 aa10.16□□□□□ -0.78
SYCP3-204ENST00000478139 PPP4R2Q9NY27 417 aa10.16□□□□□ -0.78
SYCP3-204ENST00000478139 CCDC7Q96M83 1385 aa10.16□□□□□ -0.78
SYCP3-204ENST00000478139 REREQ9P2R6 1566 aa10.16□□□□□ -0.78
SYCP3-204ENST00000478139 WASLO00401 505 aaPredicted RBP10.15□□□□□ -0.78
SYCP3-204ENST00000478139 ADAMTS2O95450 1211 aa10.15□□□□□ -0.78
SYCP3-204ENST00000478139 BCORL1Q5H9F3 1711 aa10.15□□□□□ -0.78
SYCP3-204ENST00000478139 NGLY1Q96IV0 654 aa10.15□□□□□ -0.78
SYCP3-204ENST00000478139 NLRP13Q86W25 1043 aa10.15□□□□□ -0.78
SYCP3-204ENST00000478139 CAMSAP1Q5T5Y3 1602 aa10.15□□□□□ -0.79
SYCP3-204ENST00000478139 KRT28Q7Z3Y7 464 aa10.14□□□□□ -0.79
SYCP3-204ENST00000478139 CABP1Q9NZU7 370 aa10.14□□□□□ -0.79
SYCP3-204ENST00000478139 ZNF692Q9BU19 519 aaPredicted RBP10.14□□□□□ -0.79
SYCP3-204ENST00000478139 PRDM11Q9NQV5 511 aa10.14□□□□□ -0.79
SYCP3-204ENST00000478139 TET3O43151 1660 aa10.14□□□□□ -0.79
SYCP3-204ENST00000478139 SENP3-EIF4A1A0A087X0R7 540 aa10.14□□□□□ -0.79
SYCP3-204ENST00000478139 LRRC59Q96AG4 307 aaKnown RBP10.14□□□□□ -0.79
SYCP3-204ENST00000478139 LTV1Q96GA3 475 aaPredicted RBP10.14□□□□□ -0.79
SYCP3-204ENST00000478139 CC2D1BQ5T0F9 858 aaKnown RBP10.13□□□□□ -0.79
SYCP3-204ENST00000478139 CROCC2H7BZ55 1655 aa10.13□□□□□ -0.79
SYCP3-204ENST00000478139 NUDCQ9Y266 331 aa10.12□□□□□ -0.79
SYCP3-204ENST00000478139 CEP152O94986 1710 aa10.12□□□□□ -0.79
SYCP3-204ENST00000478139 PTPRTO14522 1441 aa10.12□□□□□ -0.79
SYCP3-204ENST00000478139 CEP170BQ9Y4F5 1589 aaPredicted RBP10.12□□□□□ -0.79
SYCP3-204ENST00000478139 PIK3R4Q99570 1358 aa10.12□□□□□ -0.79
SYCP3-204ENST00000478139 LMTK2Q8IWU2 1503 aa10.12□□□□□ -0.79
SYCP3-204ENST00000478139 ATAD2Q6PL18 1390 aa10.11□□□□□ -0.79
SYCP3-204ENST00000478139 NPM2Q86SE8 214 aaKnown RBP10.11□□□□□ -0.79
SYCP3-204ENST00000478139 KIF7Q2M1P5 1343 aa10.11□□□□□ -0.79
SYCP3-204ENST00000478139 ZBED9Q6R2W3 1325 aa10.11□□□□□ -0.79
SYCP3-204ENST00000478139 WDR43Q15061 677 aaKnown RBP eCLIP10.11□□□□□ -0.79
SYCP3-204ENST00000478139 YTHDC2Q9H6S0 1430 aaKnown RBP10.1□□□□□ -0.79
SYCP3-204ENST00000478139 STRN4Q9NRL3 753 aa10.1□□□□□ -0.79
SYCP3-204ENST00000478139 ERICH6BQ5W0A0 696 aa10.1□□□□□ -0.79
SYCP3-204ENST00000478139 U2SURPO15042 1029 aaKnown RBP10.1□□□□□ -0.79
SYCP3-204ENST00000478139 SLC12A5Q9H2X9 1139 aa10.1□□□□□ -0.79
SYCP3-204ENST00000478139 USP35Q9P2H5 1018 aa10.1□□□□□ -0.79
SYCP3-204ENST00000478139 CGNL1Q0VF96 1302 aa10.1□□□□□ -0.79
SYCP3-204ENST00000478139 METP08581 1390 aa10.09□□□□□ -0.79
SYCP3-204ENST00000478139 ZC3H6P61129 1189 aaKnown RBP10.09□□□□□ -0.79
SYCP3-204ENST00000478139 ORAI2Q96SN7 254 aa10.09□□□□□ -0.79
SYCP3-204ENST00000478139 TRPM2O94759 1503 aa10.09□□□□□ -0.79
SYCP3-204ENST00000478139 IQGAP3Q86VI3 1631 aa10.09□□□□□ -0.79
SYCP3-204ENST00000478139 ZC3H13Q5T200 1668 aaKnown RBP10.09□□□□□ -0.79
SYCP3-204ENST00000478139 ABCC11Q96J66 1382 aa10.08□□□□□ -0.8
SYCP3-204ENST00000478139 UNC13BO14795 1591 aa10.08□□□□□ -0.8
SYCP3-204ENST00000478139 PANK3Q9H999 370 aa10.08□□□□□ -0.8
SYCP3-204ENST00000478139 ADGRB3O60242 1522 aa10.08□□□□□ -0.8
SYCP3-204ENST00000478139 RNF17Q9BXT8 1623 aaKnown RBP10.07□□□□□ -0.8
SYCP3-204ENST00000478139 C8orf37Q96NL8 207 aa10.07□□□□□ -0.8
SYCP3-204ENST00000478139 NLRP2Q9NX02 1062 aa10.07□□□□□ -0.8
SYCP3-204ENST00000478139 PLA2R1Q13018 1463 aa10.07□□□□□ -0.8
SYCP3-204ENST00000478139 KTN1Q86UP2 1357 aaKnown RBP10.07□□□□□ -0.8
SYCP3-204ENST00000478139 FBXO41Q8TF61 875 aa10.06□□□□□ -0.8
SYCP3-204ENST00000478139 GGNBP2Q9H3C7 697 aa10.06□□□□□ -0.8
SYCP3-204ENST00000478139 SIRT1Q96EB6 747 aa10.06□□□□□ -0.8
SYCP3-204ENST00000478139 SPATA31E1Q6ZUB1 1445 aa10.06□□□□□ -0.8
SYCP3-204ENST00000478139 SPATA31D1Q6ZQQ2 1576 aa10.05□□□□□ -0.8
SYCP3-204ENST00000478139 ACEP12821 1306 aa10.05□□□□□ -0.8
SYCP3-204ENST00000478139 SF3B2Q13435 895 aaKnown RBP10.05□□□□□ -0.8
SYCP3-204ENST00000478139 KCNH5Q8NCM2 988 aa10.04□□□□□ -0.8
SYCP3-204ENST00000478139 PRAG1Q86YV5 1406 aa10.04□□□□□ -0.8
SYCP3-204ENST00000478139 TOM1L2Q6ZVM7 507 aa10.04□□□□□ -0.8
SYCP3-204ENST00000478139 KIF1BO60333 1816 aa10.04□□□□□ -0.8
SYCP3-204ENST00000478139 ADAMTSL3P82987 1691 aa10.04□□□□□ -0.8
SYCP3-204ENST00000478139 PLCB2Q00722 1185 aa10.03□□□□□ -0.8
SYCP3-204ENST00000478139 NBR1Q14596 966 aa10.03□□□□□ -0.8
SYCP3-204ENST00000478139 MAPK8IP3Q9UPT6 1336 aa10.03□□□□□ -0.8
SYCP3-204ENST00000478139 DDX17Q92841 729 aaKnown RBP10.03□□□□□ -0.8
SYCP3-204ENST00000478139 POLR1AO95602 1720 aaPredicted RBP10.03□□□□□ -0.8
SYCP3-204ENST00000478139 C3P01024 1663 aa10.02□□□□□ -0.8
SYCP3-204ENST00000478139 RAPGEF4Q8WZA2 1011 aa10.02□□□□□ -0.81
SYCP3-204ENST00000478139 PREX1Q8TCU6 1659 aa10.02□□□□□ -0.81
SYCP3-204ENST00000478139 ROBO2Q9HCK4 1378 aa10.02□□□□□ -0.81
SYCP3-204ENST00000478139 PIK3C2BO00750 1634 aa10.02□□□□□ -0.81
SYCP3-204ENST00000478139 ZFYVE9O95405 1425 aa10.02□□□□□ -0.81
SYCP3-204ENST00000478139 PNNQ9H307 717 aaKnown RBP10.02□□□□□ -0.81
SYCP3-204ENST00000478139 CCDC136Q96JN2 1154 aa10.01□□□□□ -0.81
SYCP3-204ENST00000478139 NOP58Q9Y2X3 529 aaKnown RBP10.01□□□□□ -0.81
SYCP3-204ENST00000478139 SMG6Q86US8 1419 aaKnown RBP10.01□□□□□ -0.81
SYCP3-204ENST00000478139 DEKP35659 375 aaKnown RBP10.01□□□□□ -0.81
SYCP3-204ENST00000478139 PDE3BQ13370 1112 aa10.01□□□□□ -0.81
SYCP3-204ENST00000478139 CABLES1Q8TDN4 633 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms