RNA–Protein interactions for RNA: ENST00000477047.6

SPATA9-204, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-204ENST00000477047 SDR16C5Q8N3Y7 309 aa8.6□□□□□ -1.03
SPATA9-204ENST00000477047 SMC4Q9NTJ3 1288 aa8.6□□□□□ -1.03
SPATA9-204ENST00000477047 WRNQ14191 1432 aaPredicted RBP eCLIP8.59□□□□□ -1.03
SPATA9-204ENST00000477047 MSL3Q8N5Y2 521 aaKnown RBP8.59□□□□□ -1.03
SPATA9-204ENST00000477047 SCRIBQ14160 1630 aa8.58□□□□□ -1.04
SPATA9-204ENST00000477047 LOC102724159A0A0B4J2E5 919 aa8.58□□□□□ -1.04
SPATA9-204ENST00000477047 PWP2Q15269 919 aaKnown RBP8.58□□□□□ -1.04
SPATA9-204ENST00000477047 TIGD1Q96MW7 591 aa8.58□□□□□ -1.04
SPATA9-204ENST00000477047 PAIP2Q9BPZ3 127 aaKnown RBP8.58□□□□□ -1.04
SPATA9-204ENST00000477047 DONSONQ9NYP3 566 aa8.58□□□□□ -1.04
SPATA9-204ENST00000477047 GABPB1Q06547 395 aaPredicted RBP8.57□□□□□ -1.04
SPATA9-204ENST00000477047 FAM9BQ8IZU0 186 aa8.57□□□□□ -1.04
SPATA9-204ENST00000477047 RNF217Q8TC41 542 aa8.57□□□□□ -1.04
SPATA9-204ENST00000477047 CGNQ9P2M7 1197 aaKnown RBP8.57□□□□□ -1.04
SPATA9-204ENST00000477047 MRE11P49959 708 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 CDCA8Q53HL2 280 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 IRX2Q9BZI1 471 aaPredicted RBP8.56□□□□□ -1.04
SPATA9-204ENST00000477047 KNSTRNQ9Y448 316 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 KDM4AO75164 1064 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 ZNF853P0CG23 659 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 UVSSAQ2YD98 709 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 AEBP1Q8IUX7 1158 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 MED4Q9NPJ6 270 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 CALCOCO1Q9P1Z2 691 aa8.56□□□□□ -1.04
SPATA9-204ENST00000477047 ERCC3P19447 782 aa8.55□□□□□ -1.04
SPATA9-204ENST00000477047 SGSM3Q96HU1 749 aa8.55□□□□□ -1.04
SPATA9-204ENST00000477047 RYDENQ9NUL5 291 aaKnown RBP8.55□□□□□ -1.04
SPATA9-204ENST00000477047 FAM13BQ9NYF5 915 aa8.55□□□□□ -1.04
SPATA9-204ENST00000477047 KLHL33A6NCF5 533 aa8.54□□□□□ -1.04
SPATA9-204ENST00000477047 RAD21O60216 631 aa8.54□□□□□ -1.04
SPATA9-204ENST00000477047 HS1BP3Q53T59 392 aa8.54□□□□□ -1.04
SPATA9-204ENST00000477047 CT47A1Q5JQC4 288 aaPredicted RBP8.54□□□□□ -1.04
SPATA9-204ENST00000477047 OCEL1Q9H607 264 aa8.54□□□□□ -1.04
SPATA9-204ENST00000477047 RIPOR2Q9Y4F9 1068 aa8.54□□□□□ -1.04
SPATA9-204ENST00000477047 STK24Q9Y6E0 443 aa8.54□□□□□ -1.04
SPATA9-204ENST00000477047 CTAGE5O15320 804 aa8.53□□□□□ -1.04
SPATA9-204ENST00000477047 LIG1P18858 919 aa8.53□□□□□ -1.04
SPATA9-204ENST00000477047 TRDNQ13061 729 aa8.53□□□□□ -1.04
SPATA9-204ENST00000477047 SWT1Q5T5J6 900 aaKnown RBP8.53□□□□□ -1.04
SPATA9-204ENST00000477047 ZNF467Q7Z7K2 595 aaPredicted RBP8.53□□□□□ -1.04
SPATA9-204ENST00000477047 ARHGEF1Q92888 912 aaKnown RBP8.53□□□□□ -1.04
SPATA9-204ENST00000477047 ANP32CO43423 234 aa8.52□□□□□ -1.04
SPATA9-204ENST00000477047 KCNJ4P48050 445 aa8.52□□□□□ -1.04
SPATA9-204ENST00000477047 CSPP1Q1MSJ5 1256 aa8.52□□□□□ -1.04
SPATA9-204ENST00000477047 RPAINQ86UA6 219 aa8.52□□□□□ -1.04
SPATA9-204ENST00000477047 SNRNP27Q8WVK2 155 aaKnown RBP8.52□□□□□ -1.04
SPATA9-204ENST00000477047 ERBB3P21860 1342 aa8.52□□□□□ -1.05
SPATA9-204ENST00000477047 CADPSQ9ULU8 1353 aa8.52□□□□□ -1.05
SPATA9-204ENST00000477047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.52□□□□□ -1.05
SPATA9-204ENST00000477047 PPP1R12AO14974 1030 aaPredicted RBP8.52□□□□□ -1.05
SPATA9-204ENST00000477047 XRCC6P12956 609 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPATA9-204ENST00000477047 P3H3Q8IVL6 736 aa8.52□□□□□ -1.05
SPATA9-204ENST00000477047 KCTD17Q8N5Z5 321 aa8.52□□□□□ -1.05
SPATA9-204ENST00000477047 ZNF513Q8N8E2 541 aaPredicted RBP8.52□□□□□ -1.05
SPATA9-204ENST00000477047 SIRT1Q96EB6 747 aa8.52□□□□□ -1.05
SPATA9-204ENST00000477047 MYH16Q9H6N6 1097 aa8.52□□□□□ -1.05
SPATA9-204ENST00000477047 ANAPC4Q9UJX5 808 aa8.52□□□□□ -1.05
SPATA9-204ENST00000477047 COQ9O75208 318 aa8.51□□□□□ -1.05
SPATA9-204ENST00000477047 CCDC125Q86Z20 511 aa8.51□□□□□ -1.05
SPATA9-204ENST00000477047 JMYQ8N9B5 988 aa8.51□□□□□ -1.05
SPATA9-204ENST00000477047 PEG3Q9GZU2 1588 aa8.51□□□□□ -1.05
SPATA9-204ENST00000477047 TRIM6-TRIM34B2RNG4 842 aa8.5□□□□□ -1.05
SPATA9-204ENST00000477047 ZRSR2Q15696 482 aaKnown RBP8.5□□□□□ -1.05
SPATA9-204ENST00000477047 C11orf91Q3C1V1 193 aa8.5□□□□□ -1.05
SPATA9-204ENST00000477047 ARMCX6Q7L4S7 300 aa8.5□□□□□ -1.05
SPATA9-204ENST00000477047 TMC1Q8TDI8 760 aa8.5□□□□□ -1.05
SPATA9-204ENST00000477047 SLC26A8Q96RN1 970 aa8.5□□□□□ -1.05
SPATA9-204ENST00000477047 TRIM34Q9BYJ4 488 aa8.5□□□□□ -1.05
SPATA9-204ENST00000477047 CEP126Q9P2H0 1117 aa8.5□□□□□ -1.05
SPATA9-204ENST00000477047 TDO2P48775 406 aa8.49□□□□□ -1.05
SPATA9-204ENST00000477047 CDC37Q16543 378 aaPredicted RBP8.49□□□□□ -1.05
SPATA9-204ENST00000477047 DDX46Q7L014 1031 aaKnown RBP8.49□□□□□ -1.05
SPATA9-204ENST00000477047 ZSCAN30Q86W11 494 aa8.49□□□□□ -1.05
SPATA9-204ENST00000477047 FEZ1Q99689 392 aa8.49□□□□□ -1.05
SPATA9-204ENST00000477047 PAXBP1Q9Y5B6 917 aa8.49□□□□□ -1.05
SPATA9-204ENST00000477047 RAD54L2Q9Y4B4 1467 aa8.49□□□□□ -1.05
SPATA9-204ENST00000477047 NACADO15069 1562 aa8.49□□□□□ -1.05
SPATA9-204ENST00000477047 ZRANB2O95218 330 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPATA9-204ENST00000477047 IPO7O95373 1038 aaKnown RBP8.48□□□□□ -1.05
SPATA9-204ENST00000477047 GUCY2CP25092 1073 aa8.48□□□□□ -1.05
SPATA9-204ENST00000477047 GTF2A1P52655 376 aaPredicted RBP8.48□□□□□ -1.05
SPATA9-204ENST00000477047 ZC3H12AQ5D1E8 599 aaKnown RBP8.48□□□□□ -1.05
SPATA9-204ENST00000477047 MPNDQ8N594 471 aa8.48□□□□□ -1.05
SPATA9-204ENST00000477047 BACH2Q9BYV9 841 aa8.48□□□□□ -1.05
SPATA9-204ENST00000477047 HOXB1P14653 301 aaPredicted RBP8.48□□□□□ -1.05
SPATA9-204ENST00000477047 MCM5P33992 734 aa8.48□□□□□ -1.05
SPATA9-204ENST00000477047 RBM25P49756 843 aaKnown RBP8.48□□□□□ -1.05
SPATA9-204ENST00000477047 ICE2Q659A1 982 aa8.48□□□□□ -1.05
SPATA9-204ENST00000477047 NME8Q8N427 588 aa8.48□□□□□ -1.05
SPATA9-204ENST00000477047 BORCS6Q96GS4 357 aa8.48□□□□□ -1.05
SPATA9-204ENST00000477047 PRDM2Q13029 1718 aa8.47□□□□□ -1.05
SPATA9-204ENST00000477047 UQCRHLA0A096LP55 91 aa8.47□□□□□ -1.05
SPATA9-204ENST00000477047 HMGB1P1B2RPK0 211 aaPredicted RBP8.47□□□□□ -1.05
SPATA9-204ENST00000477047 UQCRHP07919 91 aa8.47□□□□□ -1.05
SPATA9-204ENST00000477047 CD151P48509 253 aa8.47□□□□□ -1.05
SPATA9-204ENST00000477047 SUDS3Q9H7L9 328 aaPredicted RBP8.47□□□□□ -1.05
SPATA9-204ENST00000477047 CCDC196A0A1B0GTZ2 297 aa8.46□□□□□ -1.06
SPATA9-204ENST00000477047 MPHOSPH10O00566 681 aaKnown RBP8.46□□□□□ -1.06
SPATA9-204ENST00000477047 CAPN2P17655 700 aa8.46□□□□□ -1.06
SPATA9-204ENST00000477047 SCP2P22307 547 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms