RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 KANK4Q5T7N3 995 aaPredicted RBP11.52□□□□□ -0.57
PRPF3-205ENST00000476970 GJD4Q96KN9 370 aaPredicted RBP11.51□□□□□ -0.57
PRPF3-205ENST00000476970 GLI3P10071 1580 aa11.5□□□□□ -0.57
PRPF3-205ENST00000476970 DEFB132Q7Z7B7 95 aa11.49□□□□□ -0.57
PRPF3-205ENST00000476970 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
PRPF3-205ENST00000476970 METP08581 1390 aa11.48□□□□□ -0.57
PRPF3-205ENST00000476970 NPHP3Q7Z494 1330 aa11.47□□□□□ -0.57
PRPF3-205ENST00000476970 HRCP23327 699 aa11.46□□□□□ -0.57
PRPF3-205ENST00000476970 BAG6P46379 1132 aa11.46□□□□□ -0.57
PRPF3-205ENST00000476970 UNC5CLQ8IV45 518 aa11.45□□□□□ -0.58
PRPF3-205ENST00000476970 ORAI2Q96SN7 254 aa11.45□□□□□ -0.58
PRPF3-205ENST00000476970 RGPD1P0DJD0 1748 aa11.45□□□□□ -0.58
PRPF3-205ENST00000476970 USP32Q8NFA0 1604 aa11.45□□□□□ -0.58
PRPF3-205ENST00000476970 SLIT2O94813 1529 aa11.45□□□□□ -0.58
PRPF3-205ENST00000476970 PXDNQ92626 1479 aa11.44□□□□□ -0.58
PRPF3-205ENST00000476970 NWD2Q9ULI1 1742 aa11.44□□□□□ -0.58
PRPF3-205ENST00000476970 PSDA5PKW4 1024 aaPredicted RBP11.44□□□□□ -0.58
PRPF3-205ENST00000476970 APLP2Q06481 763 aa11.44□□□□□ -0.58
PRPF3-205ENST00000476970 ZNF326Q5BKZ1 582 aaKnown RBP11.44□□□□□ -0.58
PRPF3-205ENST00000476970 CDC42BPGQ6DT37 1551 aa11.44□□□□□ -0.58
PRPF3-205ENST00000476970 PRAG1Q86YV5 1406 aa11.43□□□□□ -0.58
PRPF3-205ENST00000476970 LRPPRCP42704 1394 aaKnown RBP11.43□□□□□ -0.58
PRPF3-205ENST00000476970 YY1P25490 414 aa11.43□□□□□ -0.58
PRPF3-205ENST00000476970 NEXMIFQ5QGS0 1516 aa11.43□□□□□ -0.58
PRPF3-205ENST00000476970 HFM1A2PYH4 1435 aa11.43□□□□□ -0.58
PRPF3-205ENST00000476970 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
PRPF3-205ENST00000476970 KIF1BO60333 1816 aa11.42□□□□□ -0.58
PRPF3-205ENST00000476970 DCAF8L1A6NGE4 600 aa11.41□□□□□ -0.58
PRPF3-205ENST00000476970 KRT27Q7Z3Y8 459 aa11.41□□□□□ -0.58
PRPF3-205ENST00000476970 SEPT12Q8IYM1 358 aa11.41□□□□□ -0.58
PRPF3-205ENST00000476970 KIF1AQ12756 1690 aa11.4□□□□□ -0.58
PRPF3-205ENST00000476970 ADGRB2O60241 1585 aa11.39□□□□□ -0.59
PRPF3-205ENST00000476970 HOXD11P31277 338 aaPredicted RBP11.39□□□□□ -0.59
PRPF3-205ENST00000476970 ESCO1Q5FWF5 840 aa11.39□□□□□ -0.59
PRPF3-205ENST00000476970 ROBO2Q9HCK4 1378 aa11.39□□□□□ -0.59
PRPF3-205ENST00000476970 FAM50AQ14320 339 aaKnown RBP11.38□□□□□ -0.59
PRPF3-205ENST00000476970 VPS72Q15906 364 aa11.38□□□□□ -0.59
PRPF3-205ENST00000476970 RNF39Q9H2S5 420 aa11.38□□□□□ -0.59
PRPF3-205ENST00000476970 NUP155O75694 1391 aa11.38□□□□□ -0.59
PRPF3-205ENST00000476970 CCDC144AA2RUR9 1427 aa11.37□□□□□ -0.59
PRPF3-205ENST00000476970 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
PRPF3-205ENST00000476970 CLTCL1P53675 1640 aa11.37□□□□□ -0.59
PRPF3-205ENST00000476970 TNS1Q9HBL0 1735 aaKnown RBP11.37□□□□□ -0.59
PRPF3-205ENST00000476970 DISP2A7MBM2 1401 aa11.36□□□□□ -0.59
PRPF3-205ENST00000476970 ABCA3Q99758 1704 aa11.36□□□□□ -0.59
PRPF3-205ENST00000476970 A0A0G2JS52 829 aa11.36□□□□□ -0.59
PRPF3-205ENST00000476970 ONECUT3O60422 494 aaPredicted RBP11.36□□□□□ -0.59
PRPF3-205ENST00000476970 HAP1P54257 671 aaPredicted RBP11.36□□□□□ -0.59
PRPF3-205ENST00000476970 MYT1Q01538 1121 aa11.36□□□□□ -0.59
PRPF3-205ENST00000476970 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
PRPF3-205ENST00000476970 FOXO3O43524 673 aa11.35□□□□□ -0.59
PRPF3-205ENST00000476970 XPCQ01831 940 aaPredicted RBP11.35□□□□□ -0.59
PRPF3-205ENST00000476970 ROCK1Q13464 1354 aa11.35□□□□□ -0.59
PRPF3-205ENST00000476970 SPATA31A3Q5VYP0 1347 aa11.34□□□□□ -0.59
PRPF3-205ENST00000476970 NRAPQ86VF7 1730 aa11.33□□□□□ -0.6
PRPF3-205ENST00000476970 FMN2Q9NZ56 1722 aa11.33□□□□□ -0.6
PRPF3-205ENST00000476970 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-205ENST00000476970 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
PRPF3-205ENST00000476970 TNS3Q68CZ2 1445 aa11.33□□□□□ -0.6
PRPF3-205ENST00000476970 NAIPQ13075 1403 aa11.32□□□□□ -0.6
PRPF3-205ENST00000476970 PPLO60437 1756 aa11.31□□□□□ -0.6
PRPF3-205ENST00000476970 PARD3Q8TEW0 1356 aa11.31□□□□□ -0.6
PRPF3-205ENST00000476970 RREB1Q92766 1687 aa11.3□□□□□ -0.6
PRPF3-205ENST00000476970 KNDC1Q76NI1 1749 aa11.3□□□□□ -0.6
PRPF3-205ENST00000476970 ARHGEF10O15013 1369 aa11.29□□□□□ -0.6
PRPF3-205ENST00000476970 NINLQ9Y2I6 1382 aa11.29□□□□□ -0.6
PRPF3-205ENST00000476970 COL14A1Q05707 1796 aaKnown RBP11.29□□□□□ -0.6
PRPF3-205ENST00000476970 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
PRPF3-205ENST00000476970 THSD7AQ9UPZ6 1657 aa11.29□□□□□ -0.6
PRPF3-205ENST00000476970 IFT172Q9UG01 1749 aa11.29□□□□□ -0.6
PRPF3-205ENST00000476970 PSME1Q06323 249 aa11.28□□□□□ -0.6
PRPF3-205ENST00000476970 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
PRPF3-205ENST00000476970 PPP1R1BQ9UD71 204 aaPredicted RBP11.28□□□□□ -0.6
PRPF3-205ENST00000476970 NUP188Q5SRE5 1749 aa11.28□□□□□ -0.6
PRPF3-205ENST00000476970 TECPR2O15040 1411 aa11.27□□□□□ -0.6
PRPF3-205ENST00000476970 KRT28Q7Z3Y7 464 aa11.27□□□□□ -0.61
PRPF3-205ENST00000476970 RPGRIP1LQ68CZ1 1315 aa11.27□□□□□ -0.61
PRPF3-205ENST00000476970 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
PRPF3-205ENST00000476970 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
PRPF3-205ENST00000476970 EZH2Q15910 746 aaKnown RBP11.26□□□□□ -0.61
PRPF3-205ENST00000476970 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
PRPF3-205ENST00000476970 SBNO1A3KN83 1393 aa11.26□□□□□ -0.61
PRPF3-205ENST00000476970 NBPF8Q3BBV2 869 aa11.25□□□□□ -0.61
PRPF3-205ENST00000476970 NBPF14Q5TI25 921 aa11.25□□□□□ -0.61
PRPF3-205ENST00000476970 RRBP1Q9P2E9 1410 aaKnown RBP11.25□□□□□ -0.61
PRPF3-205ENST00000476970 CHD4Q14839 1912 aa11.25□□□□□ -0.61
PRPF3-205ENST00000476970 SENP3-EIF4A1A0A087X0R7 540 aa11.24□□□□□ -0.61
PRPF3-205ENST00000476970 CABLES1Q8TDN4 633 aa11.24□□□□□ -0.61
PRPF3-205ENST00000476970 CAMKK2Q96RR4 588 aa11.24□□□□□ -0.61
PRPF3-205ENST00000476970 SPON1Q9HCB6 807 aa11.24□□□□□ -0.61
PRPF3-205ENST00000476970 CAMTA1Q9Y6Y1 1673 aa11.24□□□□□ -0.61
PRPF3-205ENST00000476970 C1QBPQ07021 282 aaKnown RBP11.23□□□□□ -0.61
PRPF3-205ENST00000476970 LMOD2Q6P5Q4 547 aa11.23□□□□□ -0.61
PRPF3-205ENST00000476970 FAM196AQ6ZSG2 479 aa11.23□□□□□ -0.61
PRPF3-205ENST00000476970 NRXN1Q9ULB1 1477 aa11.23□□□□□ -0.61
PRPF3-205ENST00000476970 FAM83GA6ND36 823 aa11.22□□□□□ -0.61
PRPF3-205ENST00000476970 PLEKHG5O94827 1062 aa11.22□□□□□ -0.61
PRPF3-205ENST00000476970 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
PRPF3-205ENST00000476970 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
PRPF3-205ENST00000476970 BTG4Q9NY30 223 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms