RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 PTPRTO14522 1441 aa11□□□□□ -0.65
RBM39-230ENST00000476806 SLC24A1O60721 1099 aa10.99□□□□□ -0.65
RBM39-230ENST00000476806 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
RBM39-230ENST00000476806 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
RBM39-230ENST00000476806 RNF166Q96A37 237 aaPredicted RBP10.99□□□□□ -0.65
RBM39-230ENST00000476806 ARHGAP31Q2M1Z3 1444 aa10.99□□□□□ -0.65
RBM39-230ENST00000476806 CNTLNQ9NXG0 1405 aa10.99□□□□□ -0.65
RBM39-230ENST00000476806 ARHGEF40Q8TER5 1519 aa10.99□□□□□ -0.65
RBM39-230ENST00000476806 RAPGEF3O95398 923 aa10.98□□□□□ -0.65
RBM39-230ENST00000476806 FRMPD1Q5SYB0 1578 aa10.98□□□□□ -0.65
RBM39-230ENST00000476806 CHRM1P11229 460 aaPredicted RBP10.97□□□□□ -0.65
RBM39-230ENST00000476806 EIF4G2P78344 907 aaKnown RBP eCLIP10.97□□□□□ -0.65
RBM39-230ENST00000476806 GSE1Q14687 1217 aa10.97□□□□□ -0.65
RBM39-230ENST00000476806 MROH1Q8NDA8 1641 aa10.97□□□□□ -0.65
RBM39-230ENST00000476806 E9PCH4 1651 aa10.97□□□□□ -0.65
RBM39-230ENST00000476806 CEP152O94986 1710 aa10.97□□□□□ -0.65
RBM39-230ENST00000476806 RALGAPBQ86X10 1494 aa10.96□□□□□ -0.65
RBM39-230ENST00000476806 L3MBTL2Q969R5 705 aa10.96□□□□□ -0.65
RBM39-230ENST00000476806 MADDQ8WXG6 1647 aa10.95□□□□□ -0.66
RBM39-230ENST00000476806 SPATA31D1Q6ZQQ2 1576 aa10.95□□□□□ -0.66
RBM39-230ENST00000476806 ERBB3P21860 1342 aa10.95□□□□□ -0.66
RBM39-230ENST00000476806 ARID4BQ4LE39 1312 aaPredicted RBP10.95□□□□□ -0.66
RBM39-230ENST00000476806 BOLA1Q9Y3E2 137 aa10.95□□□□□ -0.66
RBM39-230ENST00000476806 LAMC1P11047 1609 aa10.95□□□□□ -0.66
RBM39-230ENST00000476806 ABCC3O15438 1527 aa10.94□□□□□ -0.66
RBM39-230ENST00000476806 WASHC2CQ9Y4E1 1318 aa10.94□□□□□ -0.66
RBM39-230ENST00000476806 ZNF710Q8N1W2 664 aa10.94□□□□□ -0.66
RBM39-230ENST00000476806 KIF1BO60333 1816 aa10.93□□□□□ -0.66
RBM39-230ENST00000476806 CAMSAP1Q5T5Y3 1602 aa10.93□□□□□ -0.66
RBM39-230ENST00000476806 RPGRIP1LQ68CZ1 1315 aa10.91□□□□□ -0.66
RBM39-230ENST00000476806 DOK7Q18PE1 504 aa10.91□□□□□ -0.66
RBM39-230ENST00000476806 ESF1Q9H501 851 aaKnown RBP10.91□□□□□ -0.66
RBM39-230ENST00000476806 SLC52A1Q9NWF4 448 aa10.91□□□□□ -0.66
RBM39-230ENST00000476806 MYOM2P54296 1465 aa10.91□□□□□ -0.66
RBM39-230ENST00000476806 ROCK2O75116 1388 aaKnown RBP10.9□□□□□ -0.66
RBM39-230ENST00000476806 KIAA1210Q9ULL0 1709 aa10.9□□□□□ -0.66
RBM39-230ENST00000476806 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.67
RBM39-230ENST00000476806 POLR1AO95602 1720 aaPredicted RBP10.89□□□□□ -0.67
RBM39-230ENST00000476806 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
RBM39-230ENST00000476806 G3V3G9 751 aa10.89□□□□□ -0.67
RBM39-230ENST00000476806 PDAP1Q13442 181 aaKnown RBP10.89□□□□□ -0.67
RBM39-230ENST00000476806 GGT6Q6P531 493 aa10.89□□□□□ -0.67
RBM39-230ENST00000476806 NPATQ14207 1427 aa10.89□□□□□ -0.67
RBM39-230ENST00000476806 SPATA31E1Q6ZUB1 1445 aa10.89□□□□□ -0.67
RBM39-230ENST00000476806 PRAG1Q86YV5 1406 aa10.89□□□□□ -0.67
RBM39-230ENST00000476806 NOS1P29475 1434 aa10.88□□□□□ -0.67
RBM39-230ENST00000476806 VARS2Q5ST30 1063 aaKnown RBP10.88□□□□□ -0.67
RBM39-230ENST00000476806 YEATS2Q9ULM3 1422 aa10.88□□□□□ -0.67
RBM39-230ENST00000476806 GPRASP1Q5JY77 1395 aa10.88□□□□□ -0.67
RBM39-230ENST00000476806 CLTCL1P53675 1640 aa10.87□□□□□ -0.67
RBM39-230ENST00000476806 DCAF11Q8TEB1 546 aa10.87□□□□□ -0.67
RBM39-230ENST00000476806 CABP2Q9NPB3 220 aa10.87□□□□□ -0.67
RBM39-230ENST00000476806 ADGRB3O60242 1522 aa10.87□□□□□ -0.67
RBM39-230ENST00000476806 RIMS1Q86UR5 1692 aaKnown RBP10.86□□□□□ -0.67
RBM39-230ENST00000476806 TRPM1Q7Z4N2 1603 aa10.86□□□□□ -0.67
RBM39-230ENST00000476806 MROH2AA6NES4 1674 aa10.85□□□□□ -0.67
RBM39-230ENST00000476806 PIK3C2BO00750 1634 aa10.85□□□□□ -0.67
RBM39-230ENST00000476806 CARD11Q9BXL7 1154 aa10.85□□□□□ -0.67
RBM39-230ENST00000476806 USP47Q96K76 1375 aa10.85□□□□□ -0.67
RBM39-230ENST00000476806 CDCA8Q53HL2 280 aa10.84□□□□□ -0.67
RBM39-230ENST00000476806 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
RBM39-230ENST00000476806 KDM5AP29375 1690 aaKnown RBP10.83□□□□□ -0.68
RBM39-230ENST00000476806 PREX1Q8TCU6 1659 aa10.83□□□□□ -0.68
RBM39-230ENST00000476806 RIMBP2O15034 1052 aa10.83□□□□□ -0.68
RBM39-230ENST00000476806 HDGFP51858 240 aaKnown RBP10.83□□□□□ -0.68
RBM39-230ENST00000476806 VGFO15240 615 aaPredicted RBP10.82□□□□□ -0.68
RBM39-230ENST00000476806 IFNLR1Q8IU57 520 aaPredicted RBP10.82□□□□□ -0.68
RBM39-230ENST00000476806 ZNF687Q8N1G0 1237 aa10.82□□□□□ -0.68
RBM39-230ENST00000476806 ZFYVE9O95405 1425 aa10.82□□□□□ -0.68
RBM39-230ENST00000476806 SETBP1Q9Y6X0 1596 aa10.82□□□□□ -0.68
RBM39-230ENST00000476806 IFT172Q9UG01 1749 aa10.81□□□□□ -0.68
RBM39-230ENST00000476806 ANP32CO43423 234 aa10.81□□□□□ -0.68
RBM39-230ENST00000476806 HSPA5P11021 654 aaKnown RBP10.81□□□□□ -0.68
RBM39-230ENST00000476806 CEBPAP49715 358 aaPredicted RBP10.81□□□□□ -0.68
RBM39-230ENST00000476806 MLECQ14165 292 aa10.81□□□□□ -0.68
RBM39-230ENST00000476806 ZNF326Q5BKZ1 582 aaKnown RBP10.81□□□□□ -0.68
RBM39-230ENST00000476806 ERVK-7P63135 1459 aa10.81□□□□□ -0.68
RBM39-230ENST00000476806 RGL3Q3MIN7 710 aa10.8□□□□□ -0.68
RBM39-230ENST00000476806 SIGLEC1Q9BZZ2 1709 aa10.8□□□□□ -0.68
RBM39-230ENST00000476806 SCAF11Q99590 1463 aaKnown RBP10.8□□□□□ -0.68
RBM39-230ENST00000476806 NRXN1Q9ULB1 1477 aa10.8□□□□□ -0.68
RBM39-230ENST00000476806 KTN1Q86UP2 1357 aaKnown RBP10.79□□□□□ -0.68
RBM39-230ENST00000476806 CENPBP07199 599 aaPredicted RBP10.79□□□□□ -0.68
RBM39-230ENST00000476806 NBPF8Q3BBV2 869 aa10.79□□□□□ -0.68
RBM39-230ENST00000476806 STRCQ7RTU9 1775 aa10.79□□□□□ -0.68
RBM39-230ENST00000476806 UGGT1Q9NYU2 1555 aa10.78□□□□□ -0.68
RBM39-230ENST00000476806 PPLO60437 1756 aa10.78□□□□□ -0.68
RBM39-230ENST00000476806 PTGER2P43116 358 aa10.78□□□□□ -0.68
RBM39-230ENST00000476806 ZSWIM6Q9HCJ5 1215 aa10.78□□□□□ -0.68
RBM39-230ENST00000476806 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
RBM39-230ENST00000476806 NLRP1Q9C000 1473 aa10.78□□□□□ -0.68
RBM39-230ENST00000476806 CLTCQ00610 1675 aaKnown RBP10.78□□□□□ -0.68
RBM39-230ENST00000476806 SYNMO15061 1565 aa10.77□□□□□ -0.68
RBM39-230ENST00000476806 LTBP4Q8N2S1 1624 aa10.77□□□□□ -0.68
RBM39-230ENST00000476806 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.77□□□□□ -0.69
RBM39-230ENST00000476806 CCDC7Q96M83 1385 aa10.77□□□□□ -0.69
RBM39-230ENST00000476806 SBNO2Q9Y2G9 1366 aa10.77□□□□□ -0.69
RBM39-230ENST00000476806 TMF1P82094 1093 aa10.76□□□□□ -0.69
RBM39-230ENST00000476806 GPR153Q6NV75 609 aa10.76□□□□□ -0.69
RBM39-230ENST00000476806 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 1405 ms