RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 NINLQ9Y2I6 1382 aa31.04■■■□□ 2.56
CCDC7-206ENST00000476558 NSD3Q9BZ95 1437 aa31.03■■■□□ 2.56
CCDC7-206ENST00000476558 KNDC1Q76NI1 1749 aa31.03■■■□□ 2.56
CCDC7-206ENST00000476558 ANKRD36BQ8N2N9 1353 aa31.02■■■□□ 2.56
CCDC7-206ENST00000476558 SLIT1O75093 1534 aa31.02■■■□□ 2.56
CCDC7-206ENST00000476558 MINK1Q8N4C8 1332 aaPredicted RBP31.02■■■□□ 2.56
CCDC7-206ENST00000476558 ARHGAP23Q9P227 1491 aa31.02■■■□□ 2.56
CCDC7-206ENST00000476558 TECPR2O15040 1411 aa31.01■■■□□ 2.55
CCDC7-206ENST00000476558 SUPT16HQ9Y5B9 1047 aaKnown RBP31.01■■■□□ 2.55
CCDC7-206ENST00000476558 PLEKHG1Q9ULL1 1385 aa31■■■□□ 2.55
CCDC7-206ENST00000476558 ADAMTS13Q76LX8 1427 aa31■■■□□ 2.55
CCDC7-206ENST00000476558 LTKP29376 864 aa31■■■□□ 2.55
CCDC7-206ENST00000476558 ATAD2Q6PL18 1390 aa31■■■□□ 2.55
CCDC7-206ENST00000476558 SIRT1Q96EB6 747 aa31■■■□□ 2.55
CCDC7-206ENST00000476558 PLEKHH1Q9ULM0 1364 aa30.97■■■□□ 2.55
CCDC7-206ENST00000476558 SRPK2P78362 688 aaKnown RBP30.96■■■□□ 2.55
CCDC7-206ENST00000476558 MED14O60244 1454 aa30.96■■■□□ 2.55
CCDC7-206ENST00000476558 BLMP54132 1417 aaPredicted RBP30.96■■■□□ 2.55
CCDC7-206ENST00000476558 FAM135BQ49AJ0 1406 aa30.96■■■□□ 2.55
CCDC7-206ENST00000476558 WAPLQ7Z5K2 1190 aa30.96■■■□□ 2.55
CCDC7-206ENST00000476558 CPS1P31327 1500 aa30.95■■■□□ 2.55
CCDC7-206ENST00000476558 CDK19Q9BWU1 502 aa30.94■■■□□ 2.54
CCDC7-206ENST00000476558 TXNDC2Q86VQ3 553 aa30.92■■■□□ 2.54
CCDC7-206ENST00000476558 CD163L1Q9NR16 1453 aa30.91■■■□□ 2.54
CCDC7-206ENST00000476558 ADAMTSL3P82987 1691 aa30.91■■■□□ 2.54
CCDC7-206ENST00000476558 CGNL1Q0VF96 1302 aa30.91■■■□□ 2.54
CCDC7-206ENST00000476558 RIMS1Q86UR5 1692 aaKnown RBP30.91■■■□□ 2.54
CCDC7-206ENST00000476558 SMG6Q86US8 1419 aaKnown RBP30.9■■■□□ 2.54
CCDC7-206ENST00000476558 A0A1W2PP64 1363 aa30.9■■■□□ 2.54
CCDC7-206ENST00000476558 THEMISQ8N1K5 641 aaPredicted RBP30.89■■■□□ 2.54
CCDC7-206ENST00000476558 NSD2O96028 1365 aa30.89■■■□□ 2.54
CCDC7-206ENST00000476558 EID1Q9Y6B2 187 aa30.89■■■□□ 2.53
CCDC7-206ENST00000476558 BCANQ96GW7 911 aa30.87■■■□□ 2.53
CCDC7-206ENST00000476558 ADAMTS8Q9UP79 889 aa30.86■■■□□ 2.53
CCDC7-206ENST00000476558 PLPPR3Q6T4P5 718 aa30.85■■■□□ 2.53
CCDC7-206ENST00000476558 FKBP8Q14318 412 aa30.84■■■□□ 2.53
CCDC7-206ENST00000476558 MORC1Q86VD1 984 aa30.84■■■□□ 2.53
CCDC7-206ENST00000476558 TERF2IPQ9NYB0 399 aa30.84■■■□□ 2.53
CCDC7-206ENST00000476558 CEP170BQ9Y4F5 1589 aaPredicted RBP30.83■■■□□ 2.53
CCDC7-206ENST00000476558 POLR3AO14802 1390 aaPredicted RBP30.82■■■□□ 2.52
CCDC7-206ENST00000476558 ROBO2Q9HCK4 1378 aa30.81■■■□□ 2.52
CCDC7-206ENST00000476558 WASLO00401 505 aaPredicted RBP30.81■■■□□ 2.52
CCDC7-206ENST00000476558 NEFLP07196 543 aa30.81■■■□□ 2.52
CCDC7-206ENST00000476558 NUDCQ9Y266 331 aa30.81■■■□□ 2.52
CCDC7-206ENST00000476558 TBX22Q9Y458 520 aa30.8■■■□□ 2.52
CCDC7-206ENST00000476558 SENP3-EIF4A1A0A087X0R7 540 aa30.79■■■□□ 2.52
CCDC7-206ENST00000476558 WDR43Q15061 677 aaKnown RBP eCLIP30.79■■■□□ 2.52
CCDC7-206ENST00000476558 CABP1Q9NZU7 370 aa30.79■■■□□ 2.52
CCDC7-206ENST00000476558 PTPRUQ92729 1446 aa30.79■■■□□ 2.52
CCDC7-206ENST00000476558 DIP2AQ14689 1571 aa30.78■■■□□ 2.52
CCDC7-206ENST00000476558 ATP7BP35670 1465 aa30.78■■■□□ 2.52
CCDC7-206ENST00000476558 ADGRB2O60241 1585 aa30.76■■■□□ 2.51
CCDC7-206ENST00000476558 SLC26A8Q96RN1 970 aa30.75■■■□□ 2.51
CCDC7-206ENST00000476558 ZNF142P52746 1687 aaPredicted RBP30.75■■■□□ 2.51
CCDC7-206ENST00000476558 ANKRD26Q9UPS8 1709 aa30.75■■■□□ 2.51
CCDC7-206ENST00000476558 HDGFL2Q7Z4V5 671 aaPredicted RBP30.75■■■□□ 2.51
CCDC7-206ENST00000476558 PDE3BQ13370 1112 aa30.74■■■□□ 2.51
CCDC7-206ENST00000476558 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.73■■■□□ 2.51
CCDC7-206ENST00000476558 FYB1O15117 783 aa30.71■■■□□ 2.51
CCDC7-206ENST00000476558 CPSF1Q10570 1443 aaKnown RBP30.71■■■□□ 2.51
CCDC7-206ENST00000476558 SHPRHQ149N8 1683 aa30.71■■■□□ 2.51
CCDC7-206ENST00000476558 SETD1BQ9UPS6 1966 aaKnown RBP30.71■■■□□ 2.51
CCDC7-206ENST00000476558 TNNT2P45379 298 aaPredicted RBP30.68■■■□□ 2.5
CCDC7-206ENST00000476558 PPIP5K1Q6PFW1 1433 aa30.68■■■□□ 2.5
CCDC7-206ENST00000476558 NUDT16Q96DE0 195 aaKnown RBP30.68■■■□□ 2.5
CCDC7-206ENST00000476558 KIF20BQ96Q89 1820 aa30.68■■■□□ 2.5
CCDC7-206ENST00000476558 PTCH1Q13635 1447 aa30.67■■■□□ 2.5
CCDC7-206ENST00000476558 AMOTL2Q9Y2J4 779 aa30.66■■■□□ 2.5
CCDC7-206ENST00000476558 MTHFSP49914 203 aa30.66■■■□□ 2.5
CCDC7-206ENST00000476558 XRN1Q8IZH2 1706 aaKnown RBP30.65■■■□□ 2.5
CCDC7-206ENST00000476558 GGNBP2Q9H3C7 697 aa30.65■■■□□ 2.5
CCDC7-206ENST00000476558 SALL2Q9Y467 1007 aaPredicted RBP30.65■■■□□ 2.5
CCDC7-206ENST00000476558 CCDC61Q9Y6R9 512 aa30.65■■■□□ 2.5
CCDC7-206ENST00000476558 RNF123Q5XPI4 1314 aa30.65■■■□□ 2.5
CCDC7-206ENST00000476558 CDC42BPGQ6DT37 1551 aa30.65■■■□□ 2.5
CCDC7-206ENST00000476558 PIK3R4Q99570 1358 aa30.62■■■□□ 2.49
CCDC7-206ENST00000476558 PRR36Q9H6K5 1346 aa30.62■■■□□ 2.49
CCDC7-206ENST00000476558 EDC4Q6P2E9 1401 aaKnown RBP30.6■■■□□ 2.49
CCDC7-206ENST00000476558 AKAP12Q02952 1782 aa30.6■■■□□ 2.49
CCDC7-206ENST00000476558 ZNF521Q96K83 1311 aa30.6■■■□□ 2.49
CCDC7-206ENST00000476558 MON2Q7Z3U7 1717 aa30.6■■■□□ 2.49
CCDC7-206ENST00000476558 ERICH6BQ5W0A0 696 aa30.6■■■□□ 2.49
CCDC7-206ENST00000476558 TOPAZ1Q8N9V7 1692 aa30.59■■■□□ 2.49
CCDC7-206ENST00000476558 CFAP53Q96M91 514 aa30.58■■■□□ 2.49
CCDC7-206ENST00000476558 CDCA7LQ96GN5 454 aa30.57■■■□□ 2.48
CCDC7-206ENST00000476558 NCKAP5LQ9HCH0 1330 aa30.57■■■□□ 2.48
CCDC7-206ENST00000476558 ANKLE2Q86XL3 938 aa30.57■■■□□ 2.48
CCDC7-206ENST00000476558 CCDC146Q8IYE0 955 aa30.55■■■□□ 2.48
CCDC7-206ENST00000476558 ITSN1Q15811 1721 aa30.54■■■□□ 2.48
CCDC7-206ENST00000476558 IRX6P78412 446 aaPredicted RBP30.53■■■□□ 2.48
CCDC7-206ENST00000476558 NGEFQ8N5V2 710 aa30.53■■■□□ 2.48
CCDC7-206ENST00000476558 COL3A1P02461 1466 aaPredicted RBP30.53■■■□□ 2.48
CCDC7-206ENST00000476558 ZNF692Q9BU19 519 aaPredicted RBP30.52■■■□□ 2.48
CCDC7-206ENST00000476558 PLEKHG3A1L390 1219 aa30.51■■■□□ 2.47
CCDC7-206ENST00000476558 APAF1O14727 1248 aa30.51■■■□□ 2.47
CCDC7-206ENST00000476558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.51■■■□□ 2.47
CCDC7-206ENST00000476558 CHD2O14647 1828 aaKnown RBP30.5■■■□□ 2.47
CCDC7-206ENST00000476558 PNPLA6Q8IY17 1366 aa30.49■■■□□ 2.47
CCDC7-206ENST00000476558 KCNA6P17658 529 aa30.47■■■□□ 2.47
CCDC7-206ENST00000476558 NRKQ7Z2Y5 1582 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms