RNA–Protein interactions for RNA: ENST00000476556.5

RERE-212, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 1 (best) BASIC

Gene RERE, Length 4,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-212ENST00000476556 ATF7IPQ6VMQ6 1270 aa16.21■□□□□ 0.19
RERE-212ENST00000476556 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
RERE-212ENST00000476556 NASPP49321 788 aaPredicted RBP16.21■□□□□ 0.19
RERE-212ENST00000476556 CTTNBP2Q8WZ74 1663 aa16.21■□□□□ 0.19
RERE-212ENST00000476556 NUCB2P80303 420 aa16.21■□□□□ 0.19
RERE-212ENST00000476556 CDC45O75419 566 aa16.21■□□□□ 0.18
RERE-212ENST00000476556 GNAI1P63096 354 aa16.21■□□□□ 0.18
RERE-212ENST00000476556 COG3Q96JB2 828 aa16.2■□□□□ 0.18
RERE-212ENST00000476556 PRKCSHP14314 528 aaPredicted RBP16.19■□□□□ 0.18
RERE-212ENST00000476556 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
RERE-212ENST00000476556 PHF14O94880 888 aa16.19■□□□□ 0.18
RERE-212ENST00000476556 INTS3Q68E01 1043 aaKnown RBP16.19■□□□□ 0.18
RERE-212ENST00000476556 TBC1D2Q9BYX2 928 aa16.19■□□□□ 0.18
RERE-212ENST00000476556 TEX14Q8IWB6 1497 aa16.18■□□□□ 0.18
RERE-212ENST00000476556 GRPEL1Q9HAV7 217 aa16.18■□□□□ 0.18
RERE-212ENST00000476556 PRKAR2BP31323 418 aa16.18■□□□□ 0.18
RERE-212ENST00000476556 FAM13BQ9NYF5 915 aa16.17■□□□□ 0.18
RERE-212ENST00000476556 NSD3Q9BZ95 1437 aa16.17■□□□□ 0.18
RERE-212ENST00000476556 GOLGA6L6A8MZA4 724 aa16.16■□□□□ 0.18
RERE-212ENST00000476556 CAVIN1Q6NZI2 390 aaKnown RBP16.16■□□□□ 0.18
RERE-212ENST00000476556 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
RERE-212ENST00000476556 CT47B1P0C2W7 299 aaPredicted RBP16.15■□□□□ 0.18
RERE-212ENST00000476556 NUP153P49790 1475 aaKnown RBP16.15■□□□□ 0.18
RERE-212ENST00000476556 GRIN2AQ12879 1464 aa16.15■□□□□ 0.18
RERE-212ENST00000476556 ANO2Q9NQ90 1003 aa16.15■□□□□ 0.18
RERE-212ENST00000476556 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.14■□□□□ 0.18
RERE-212ENST00000476556 AMER1Q5JTC6 1135 aaPredicted RBP16.14■□□□□ 0.17
RERE-212ENST00000476556 CHD1LQ86WJ1 897 aa16.14■□□□□ 0.17
RERE-212ENST00000476556 PZPP20742 1482 aa16.14■□□□□ 0.17
RERE-212ENST00000476556 TMEM57Q8N5G2 664 aa16.14■□□□□ 0.17
RERE-212ENST00000476556 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
RERE-212ENST00000476556 TESK2Q96S53 571 aa16.14■□□□□ 0.17
RERE-212ENST00000476556 KIF14Q15058 1648 aa16.14■□□□□ 0.17
RERE-212ENST00000476556 AMPHP49418 695 aa16.13■□□□□ 0.17
RERE-212ENST00000476556 PRAG1Q86YV5 1406 aa16.13■□□□□ 0.17
RERE-212ENST00000476556 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
RERE-212ENST00000476556 NRDCO43847 1150 aa16.12■□□□□ 0.17
RERE-212ENST00000476556 RNF214Q8ND24 703 aa16.12■□□□□ 0.17
RERE-212ENST00000476556 ESPNB1AK53 854 aa16.12■□□□□ 0.17
RERE-212ENST00000476556 K7ELQ4 463 aaPredicted RBP16.12■□□□□ 0.17
RERE-212ENST00000476556 ZNF608Q9ULD9 1512 aaPredicted RBP16.12■□□□□ 0.17
RERE-212ENST00000476556 SPATA31E1Q6ZUB1 1445 aa16.12■□□□□ 0.17
RERE-212ENST00000476556 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
RERE-212ENST00000476556 LTV1Q96GA3 475 aaPredicted RBP16.11■□□□□ 0.17
RERE-212ENST00000476556 R3HCC1Q9Y3T6 440 aaKnown RBP16.11■□□□□ 0.17
RERE-212ENST00000476556 TMPOP42166 694 aaKnown RBP16.11■□□□□ 0.17
RERE-212ENST00000476556 CSPP1Q1MSJ5 1256 aa16.11■□□□□ 0.17
RERE-212ENST00000476556 TWISTNBQ3B726 338 aaPredicted RBP16.11■□□□□ 0.17
RERE-212ENST00000476556 NECTIN2Q92692 538 aa16.11■□□□□ 0.17
RERE-212ENST00000476556 ISY1Q9ULR0 285 aaKnown RBP16.11■□□□□ 0.17
RERE-212ENST00000476556 RABEP1Q15276 862 aa16.1■□□□□ 0.17
RERE-212ENST00000476556 TBC1D32Q96NH3 1257 aa16.1■□□□□ 0.17
RERE-212ENST00000476556 PRPF40AO75400 957 aaKnown RBP16.1■□□□□ 0.17
RERE-212ENST00000476556 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
RERE-212ENST00000476556 PCDHB15Q9Y5E8 787 aa16.09■□□□□ 0.17
RERE-212ENST00000476556 CIZ1Q9ULV3 898 aaPredicted RBP16.09■□□□□ 0.17
RERE-212ENST00000476556 ADGRF5Q8IZF2 1346 aa16.09■□□□□ 0.17
RERE-212ENST00000476556 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
RERE-212ENST00000476556 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.09■□□□□ 0.17
RERE-212ENST00000476556 SCAF11Q99590 1463 aaKnown RBP16.08■□□□□ 0.17
RERE-212ENST00000476556 PRAM1Q96QH2 718 aa16.08■□□□□ 0.17
RERE-212ENST00000476556 GPATCH3Q96I76 525 aa16.08■□□□□ 0.16
RERE-212ENST00000476556 FKBP5Q13451 457 aaPredicted RBP16.08■□□□□ 0.16
RERE-212ENST00000476556 WDR62O43379 1518 aa16.08■□□□□ 0.16
RERE-212ENST00000476556 RAPGEF6Q8TEU7 1601 aa16.08■□□□□ 0.16
RERE-212ENST00000476556 NEK4P51957 841 aa16.07■□□□□ 0.16
RERE-212ENST00000476556 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
RERE-212ENST00000476556 TRIM27P14373 513 aa16.06■□□□□ 0.16
RERE-212ENST00000476556 SEC24BO95487 1268 aa16.06■□□□□ 0.16
RERE-212ENST00000476556 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
RERE-212ENST00000476556 MAGI3Q5TCQ9 1506 aa16.05■□□□□ 0.16
RERE-212ENST00000476556 HTATSF1O43719 755 aaKnown RBP16.05■□□□□ 0.16
RERE-212ENST00000476556 CABP1Q9NZU7 370 aa16.05■□□□□ 0.16
RERE-212ENST00000476556 GPRASP1Q5JY77 1395 aa16.05■□□□□ 0.16
RERE-212ENST00000476556 UHRF1BP1Q6BDS2 1440 aa16.05■□□□□ 0.16
RERE-212ENST00000476556 DNMT1P26358 1616 aaKnown RBP16.04■□□□□ 0.16
RERE-212ENST00000476556 TSPYL4Q9UJ04 414 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 KDM2BQ8NHM5 1336 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 A0A0G2JS52 829 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 TPM2P07951 284 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 CHMP3Q9Y3E7 222 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 HSP90B1P14625 803 aaKnown RBP16.04■□□□□ 0.16
RERE-212ENST00000476556 THUMPD2Q9BTF0 503 aaKnown RBP16.04■□□□□ 0.16
RERE-212ENST00000476556 CHMP4AQ9BY43 222 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 DIAPH3Q9NSV4 1193 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 TNNQ9UQP3 1299 aa16.04■□□□□ 0.16
RERE-212ENST00000476556 TNPO1Q92973 898 aaKnown RBP16.02■□□□□ 0.16
RERE-212ENST00000476556 FAM135AQ9P2D6 1515 aa16.02■□□□□ 0.15
RERE-212ENST00000476556 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.15
RERE-212ENST00000476556 EIF2S2P20042 333 aaKnown RBP16.02■□□□□ 0.15
RERE-212ENST00000476556 RBM10P98175 930 aaKnown RBP16.02■□□□□ 0.15
RERE-212ENST00000476556 KDM6BO15054 1643 aa16.01■□□□□ 0.15
RERE-212ENST00000476556 MBD3O95983 291 aa16.01■□□□□ 0.15
RERE-212ENST00000476556 CCDC39Q9UFE4 941 aa16.01■□□□□ 0.15
RERE-212ENST00000476556 ITSN2Q9NZM3 1697 aa16.01■□□□□ 0.15
RERE-212ENST00000476556 RLBP1P12271 317 aa16.01■□□□□ 0.15
RERE-212ENST00000476556 HDAC5Q9UQL6 1122 aa16.01■□□□□ 0.15
RERE-212ENST00000476556 CDK19Q9BWU1 502 aa16■□□□□ 0.15
RERE-212ENST00000476556 VPS37CA5D8V6 355 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms