RNA–Protein interactions for RNA: ENST00000475988.1

PKP1-204, Transcript of plakophilin 1, humanhuman

TSL 3

Gene PKP1, Length 931 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-204ENST00000475988 XRN1Q8IZH2 1706 aaKnown RBP18.4■□□□□ 0.54
PKP1-204ENST00000475988 CCDC184Q52MB2 194 aa18.4■□□□□ 0.54
PKP1-204ENST00000475988 EID1Q9Y6B2 187 aa18.4■□□□□ 0.54
PKP1-204ENST00000475988 PLEKHH1Q9ULM0 1364 aa18.39■□□□□ 0.53
PKP1-204ENST00000475988 AMER1Q5JTC6 1135 aaPredicted RBP18.38■□□□□ 0.53
PKP1-204ENST00000475988 MYBBP1AQ9BQG0 1328 aaKnown RBP18.38■□□□□ 0.53
PKP1-204ENST00000475988 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
PKP1-204ENST00000475988 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
PKP1-204ENST00000475988 SENP3Q9H4L4 574 aaPredicted RBP18.37■□□□□ 0.53
PKP1-204ENST00000475988 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
PKP1-204ENST00000475988 PTCH1Q13635 1447 aa18.37■□□□□ 0.53
PKP1-204ENST00000475988 ATAD2Q6PL18 1390 aa18.36■□□□□ 0.53
PKP1-204ENST00000475988 FBXO41Q8TF61 875 aa18.36■□□□□ 0.53
PKP1-204ENST00000475988 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
PKP1-204ENST00000475988 ROBO2Q9HCK4 1378 aa18.35■□□□□ 0.53
PKP1-204ENST00000475988 POGKQ9P215 609 aa18.35■□□□□ 0.53
PKP1-204ENST00000475988 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
PKP1-204ENST00000475988 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
PKP1-204ENST00000475988 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
PKP1-204ENST00000475988 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.34■□□□□ 0.53
PKP1-204ENST00000475988 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.53
PKP1-204ENST00000475988 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
PKP1-204ENST00000475988 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.52
PKP1-204ENST00000475988 MINK1Q8N4C8 1332 aaPredicted RBP18.32■□□□□ 0.52
PKP1-204ENST00000475988 SAFB2Q14151 953 aaKnown RBP eCLIP18.31■□□□□ 0.52
PKP1-204ENST00000475988 WAPLQ7Z5K2 1190 aa18.31■□□□□ 0.52
PKP1-204ENST00000475988 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
PKP1-204ENST00000475988 SLC12A5Q9H2X9 1139 aa18.3■□□□□ 0.52
PKP1-204ENST00000475988 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
PKP1-204ENST00000475988 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
PKP1-204ENST00000475988 CHD2O14647 1828 aaKnown RBP18.3■□□□□ 0.52
PKP1-204ENST00000475988 TOPAZ1Q8N9V7 1692 aa18.29■□□□□ 0.52
PKP1-204ENST00000475988 ATP7BP35670 1465 aa18.29■□□□□ 0.52
PKP1-204ENST00000475988 CC2D1BQ5T0F9 858 aaKnown RBP18.28■□□□□ 0.52
PKP1-204ENST00000475988 CDK19Q9BWU1 502 aa18.28■□□□□ 0.52
PKP1-204ENST00000475988 ANKLE2Q86XL3 938 aa18.27■□□□□ 0.52
PKP1-204ENST00000475988 BCANQ96GW7 911 aa18.27■□□□□ 0.52
PKP1-204ENST00000475988 SLC26A8Q96RN1 970 aa18.27■□□□□ 0.52
PKP1-204ENST00000475988 A0A1W2PP64 1363 aa18.27■□□□□ 0.51
PKP1-204ENST00000475988 NSD2O96028 1365 aa18.27■□□□□ 0.51
PKP1-204ENST00000475988 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
PKP1-204ENST00000475988 WASLO00401 505 aaPredicted RBP18.26■□□□□ 0.51
PKP1-204ENST00000475988 PNISRQ8TF01 805 aaKnown RBP18.26■□□□□ 0.51
PKP1-204ENST00000475988 INSRP06213 1382 aa18.26■□□□□ 0.51
PKP1-204ENST00000475988 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
PKP1-204ENST00000475988 NWD1Q149M9 1564 aa18.25■□□□□ 0.51
PKP1-204ENST00000475988 CDC42BPGQ6DT37 1551 aa18.25■□□□□ 0.51
PKP1-204ENST00000475988 NPHP4O75161 1426 aaPredicted RBP18.24■□□□□ 0.51
PKP1-204ENST00000475988 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
PKP1-204ENST00000475988 AKAP12Q02952 1782 aa18.23■□□□□ 0.51
PKP1-204ENST00000475988 AMOTL2Q9Y2J4 779 aa18.23■□□□□ 0.51
PKP1-204ENST00000475988 MON2Q7Z3U7 1717 aa18.23■□□□□ 0.51
PKP1-204ENST00000475988 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
PKP1-204ENST00000475988 PPP2R1AP30153 589 aa18.22■□□□□ 0.51
PKP1-204ENST00000475988 KIF20BQ96Q89 1820 aa18.21■□□□□ 0.51
PKP1-204ENST00000475988 CNGB1Q14028 1251 aaPredicted RBP18.21■□□□□ 0.51
PKP1-204ENST00000475988 CGNL1Q0VF96 1302 aa18.21■□□□□ 0.51
PKP1-204ENST00000475988 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
PKP1-204ENST00000475988 TERF2IPQ9NYB0 399 aa18.19■□□□□ 0.5
PKP1-204ENST00000475988 FMN2Q9NZ56 1722 aa18.18■□□□□ 0.5
PKP1-204ENST00000475988 NRKQ7Z2Y5 1582 aa18.18■□□□□ 0.5
PKP1-204ENST00000475988 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
PKP1-204ENST00000475988 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
PKP1-204ENST00000475988 PRR36Q9H6K5 1346 aa18.18■□□□□ 0.5
PKP1-204ENST00000475988 NALCNQ8IZF0 1738 aa18.17■□□□□ 0.5
PKP1-204ENST00000475988 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
PKP1-204ENST00000475988 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
PKP1-204ENST00000475988 CABP1Q9NZU7 370 aa18.16■□□□□ 0.5
PKP1-204ENST00000475988 KCNA6P17658 529 aa18.15■□□□□ 0.5
PKP1-204ENST00000475988 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.5
PKP1-204ENST00000475988 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
PKP1-204ENST00000475988 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
PKP1-204ENST00000475988 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
PKP1-204ENST00000475988 NKTRP30414 1462 aaKnown RBP18.14■□□□□ 0.5
PKP1-204ENST00000475988 HDGFL2Q7Z4V5 671 aaPredicted RBP18.14■□□□□ 0.49
PKP1-204ENST00000475988 CCDC61Q9Y6R9 512 aa18.14■□□□□ 0.49
PKP1-204ENST00000475988 SHPRHQ149N8 1683 aa18.13■□□□□ 0.49
PKP1-204ENST00000475988 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
PKP1-204ENST00000475988 LMTK3Q96Q04 1460 aa18.12■□□□□ 0.49
PKP1-204ENST00000475988 PLEKHG3A1L390 1219 aa18.11■□□□□ 0.49
PKP1-204ENST00000475988 ADGRL3Q9HAR2 1447 aa18.1■□□□□ 0.49
PKP1-204ENST00000475988 NCKAP5LQ9HCH0 1330 aa18.1■□□□□ 0.49
PKP1-204ENST00000475988 MORC1Q86VD1 984 aa18.1■□□□□ 0.49
PKP1-204ENST00000475988 FYB1O15117 783 aa18.09■□□□□ 0.49
PKP1-204ENST00000475988 SSH2Q76I76 1423 aa18.08■□□□□ 0.49
PKP1-204ENST00000475988 RGPD8O14715 1765 aaPredicted RBP18.08■□□□□ 0.48
PKP1-204ENST00000475988 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
PKP1-204ENST00000475988 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
PKP1-204ENST00000475988 ZNF692Q9BU19 519 aaPredicted RBP18.06■□□□□ 0.48
PKP1-204ENST00000475988 STRCQ7RTU9 1775 aa18.06■□□□□ 0.48
PKP1-204ENST00000475988 USP6P35125 1406 aa18.06■□□□□ 0.48
PKP1-204ENST00000475988 STRCP1A6NGW2 1772 aa18.05■□□□□ 0.48
PKP1-204ENST00000475988 USP54Q70EL1 1684 aa18.05■□□□□ 0.48
PKP1-204ENST00000475988 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
PKP1-204ENST00000475988 GGNBP2Q9H3C7 697 aa18.02■□□□□ 0.48
PKP1-204ENST00000475988 ACEP12821 1306 aa18.01■□□□□ 0.47
PKP1-204ENST00000475988 ADAMTS8Q9UP79 889 aa18.01■□□□□ 0.47
PKP1-204ENST00000475988 PNPLA6Q8IY17 1366 aa18.01■□□□□ 0.47
PKP1-204ENST00000475988 OVOS2A0A0J9YW53 1432 aa18■□□□□ 0.47
PKP1-204ENST00000475988 OVOS2Q6IE36 1432 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms