RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 PIK3R4Q99570 1358 aa16.03■□□□□ 0.16
CALD1-217ENST00000475772 ITGAEP38570 1179 aa16.03■□□□□ 0.16
CALD1-217ENST00000475772 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
CALD1-217ENST00000475772 DIP2AQ14689 1571 aa16.01■□□□□ 0.15
CALD1-217ENST00000475772 NUBP1P53384 320 aa16.01■□□□□ 0.15
CALD1-217ENST00000475772 LRP6O75581 1613 aa16.01■□□□□ 0.15
CALD1-217ENST00000475772 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
CALD1-217ENST00000475772 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
CALD1-217ENST00000475772 C19orf67A6NJJ6 358 aa15.99■□□□□ 0.15
CALD1-217ENST00000475772 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
CALD1-217ENST00000475772 AHDC1Q5TGY3 1603 aaPredicted RBP15.98■□□□□ 0.15
CALD1-217ENST00000475772 SETD1AO15047 1707 aaKnown RBP15.98■□□□□ 0.15
CALD1-217ENST00000475772 ATF3P18847 181 aa15.98■□□□□ 0.15
CALD1-217ENST00000475772 BRINP3Q76B58 766 aa15.98■□□□□ 0.15
CALD1-217ENST00000475772 TRPM2O94759 1503 aa15.98■□□□□ 0.15
CALD1-217ENST00000475772 SPHKAPQ2M3C7 1700 aa15.97■□□□□ 0.15
CALD1-217ENST00000475772 SPOCK2Q92563 424 aa15.97■□□□□ 0.15
CALD1-217ENST00000475772 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
CALD1-217ENST00000475772 METP08581 1390 aa15.96■□□□□ 0.15
CALD1-217ENST00000475772 XRN1Q8IZH2 1706 aaKnown RBP15.96■□□□□ 0.15
CALD1-217ENST00000475772 HAX1O00165 279 aa15.95■□□□□ 0.14
CALD1-217ENST00000475772 SETBP1Q9Y6X0 1596 aa15.95■□□□□ 0.14
CALD1-217ENST00000475772 SHPRHQ149N8 1683 aa15.95■□□□□ 0.14
CALD1-217ENST00000475772 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
CALD1-217ENST00000475772 MST1RQ04912 1400 aa15.93■□□□□ 0.14
CALD1-217ENST00000475772 ZNF326Q5BKZ1 582 aaKnown RBP15.92■□□□□ 0.14
CALD1-217ENST00000475772 CLTCL1P53675 1640 aa15.91■□□□□ 0.14
CALD1-217ENST00000475772 CD44P16070 742 aaKnown RBP15.91■□□□□ 0.14
CALD1-217ENST00000475772 DCCP43146 1447 aa15.91■□□□□ 0.14
CALD1-217ENST00000475772 NEXMIFQ5QGS0 1516 aa15.9■□□□□ 0.14
CALD1-217ENST00000475772 ZNF772Q68DY9 489 aaPredicted RBP15.9■□□□□ 0.14
CALD1-217ENST00000475772 DDX17Q92841 729 aaKnown RBP15.9■□□□□ 0.14
CALD1-217ENST00000475772 ASXL1Q8IXJ9 1541 aa15.89■□□□□ 0.13
CALD1-217ENST00000475772 SETD5Q9C0A6 1442 aa15.89■□□□□ 0.13
CALD1-217ENST00000475772 EVX2Q03828 476 aa15.89■□□□□ 0.13
CALD1-217ENST00000475772 MEX3CQ5U5Q3 659 aaKnown RBP15.89■□□□□ 0.13
CALD1-217ENST00000475772 NHSL1Q5SYE7 1610 aa15.89■□□□□ 0.13
CALD1-217ENST00000475772 NAIPQ13075 1403 aa15.88■□□□□ 0.13
CALD1-217ENST00000475772 NUTM2BA6NNL0 878 aaPredicted RBP15.88■□□□□ 0.13
CALD1-217ENST00000475772 NUTM2EB1AL46 878 aaPredicted RBP15.88■□□□□ 0.13
CALD1-217ENST00000475772 NUTM2AQ8IVF1 878 aaPredicted RBP15.88■□□□□ 0.13
CALD1-217ENST00000475772 UPF1Q92900 1129 aaKnown RBP eCLIP15.88■□□□□ 0.13
CALD1-217ENST00000475772 KIF1BO60333 1816 aa15.87■□□□□ 0.13
CALD1-217ENST00000475772 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
CALD1-217ENST00000475772 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
CALD1-217ENST00000475772 ADGRL3Q9HAR2 1447 aa15.85■□□□□ 0.13
CALD1-217ENST00000475772 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
CALD1-217ENST00000475772 LRRC59Q96AG4 307 aaKnown RBP15.85■□□□□ 0.13
CALD1-217ENST00000475772 RXRBP28702 533 aa15.84■□□□□ 0.13
CALD1-217ENST00000475772 AFF2P51816 1311 aa15.84■□□□□ 0.13
CALD1-217ENST00000475772 TSPYL2Q9H2G4 693 aaPredicted RBP15.83■□□□□ 0.12
CALD1-217ENST00000475772 PNPLA6Q8IY17 1366 aa15.82■□□□□ 0.12
CALD1-217ENST00000475772 C1orf167Q5SNV9 1468 aa15.82■□□□□ 0.12
CALD1-217ENST00000475772 PAK3O75914 559 aaPredicted RBP15.81■□□□□ 0.12
CALD1-217ENST00000475772 FAM212AQ96EL1 285 aa15.81■□□□□ 0.12
CALD1-217ENST00000475772 ORAI2Q96SN7 254 aa15.81■□□□□ 0.12
CALD1-217ENST00000475772 ROBO2Q9HCK4 1378 aa15.81■□□□□ 0.12
CALD1-217ENST00000475772 VGFO15240 615 aaPredicted RBP15.8■□□□□ 0.12
CALD1-217ENST00000475772 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
CALD1-217ENST00000475772 QTRT2Q9H974 415 aaKnown RBP15.79■□□□□ 0.12
CALD1-217ENST00000475772 LAMC1P11047 1609 aa15.79■□□□□ 0.12
CALD1-217ENST00000475772 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
CALD1-217ENST00000475772 SOS2Q07890 1332 aaPredicted RBP15.78■□□□□ 0.12
CALD1-217ENST00000475772 RPGRIP1LQ68CZ1 1315 aa15.78■□□□□ 0.12
CALD1-217ENST00000475772 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
CALD1-217ENST00000475772 C8orf37Q96NL8 207 aa15.78■□□□□ 0.12
CALD1-217ENST00000475772 PTCH1Q13635 1447 aa15.77■□□□□ 0.12
CALD1-217ENST00000475772 PPLO60437 1756 aa15.77■□□□□ 0.12
CALD1-217ENST00000475772 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
CALD1-217ENST00000475772 HFM1A2PYH4 1435 aa15.77■□□□□ 0.11
CALD1-217ENST00000475772 PRAG1Q86YV5 1406 aa15.77■□□□□ 0.11
CALD1-217ENST00000475772 GSE1Q14687 1217 aa15.76■□□□□ 0.11
CALD1-217ENST00000475772 ADAMTS2O95450 1211 aa15.74■□□□□ 0.11
CALD1-217ENST00000475772 RBM6P78332 1123 aaKnown RBP15.74■□□□□ 0.11
CALD1-217ENST00000475772 RGS12O14924 1447 aa15.74■□□□□ 0.11
CALD1-217ENST00000475772 ADGRF5Q8IZF2 1346 aa15.73■□□□□ 0.11
CALD1-217ENST00000475772 ZNF579Q8NAF0 562 aaKnown RBP15.73■□□□□ 0.11
CALD1-217ENST00000475772 NGLY1Q96IV0 654 aa15.72■□□□□ 0.11
CALD1-217ENST00000475772 CIZ1Q9ULV3 898 aaPredicted RBP15.72■□□□□ 0.11
CALD1-217ENST00000475772 FNBP4Q8N3X1 1017 aaPredicted RBP15.7■□□□□ 0.1
CALD1-217ENST00000475772 WAPLQ7Z5K2 1190 aa15.69■□□□□ 0.1
CALD1-217ENST00000475772 COL22A1Q8NFW1 1626 aaPredicted RBP15.68■□□□□ 0.1
CALD1-217ENST00000475772 RGL3Q3MIN7 710 aa15.68■□□□□ 0.1
CALD1-217ENST00000475772 USP21Q9UK80 565 aa15.68■□□□□ 0.1
CALD1-217ENST00000475772 SPATA31E1Q6ZUB1 1445 aa15.68■□□□□ 0.1
CALD1-217ENST00000475772 ESCO1Q5FWF5 840 aa15.67■□□□□ 0.1
CALD1-217ENST00000475772 PXDNQ92626 1479 aa15.66■□□□□ 0.1
CALD1-217ENST00000475772 IFT172Q9UG01 1749 aa15.66■□□□□ 0.1
CALD1-217ENST00000475772 PLEKHH1Q9ULM0 1364 aa15.66■□□□□ 0.1
CALD1-217ENST00000475772 FOXO3O43524 673 aa15.66■□□□□ 0.1
CALD1-217ENST00000475772 TMEM132EQ6IEE7 984 aa15.66■□□□□ 0.1
CALD1-217ENST00000475772 PHF12Q96QT6 1004 aa15.66■□□□□ 0.1
CALD1-217ENST00000475772 MPHOSPH9Q99550 1183 aa15.66■□□□□ 0.1
CALD1-217ENST00000475772 STK26Q9P289 416 aa15.66■□□□□ 0.1
CALD1-217ENST00000475772 XPCQ01831 940 aaPredicted RBP15.65■□□□□ 0.1
CALD1-217ENST00000475772 TRPC5Q9UL62 973 aaPredicted RBP15.65■□□□□ 0.1
CALD1-217ENST00000475772 TECPR2O15040 1411 aa15.65■□□□□ 0.1
CALD1-217ENST00000475772 CDC42BPGQ6DT37 1551 aa15.65■□□□□ 0.1
CALD1-217ENST00000475772 MYOM2P54296 1465 aa15.65■□□□□ 0.1
CALD1-217ENST00000475772 ABCC11Q96J66 1382 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms