RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 INTS3Q68E01 1043 aaKnown RBP13.3□□□□□ -0.28
VAPB-204ENST00000475243 SASS6Q6UVJ0 657 aa13.3□□□□□ -0.28
VAPB-204ENST00000475243 HOOK1Q9UJC3 728 aaKnown RBP13.3□□□□□ -0.28
VAPB-204ENST00000475243 ROCK1Q13464 1354 aa13.29□□□□□ -0.28
VAPB-204ENST00000475243 KAT6BQ8WYB5 2073 aa13.29□□□□□ -0.28
VAPB-204ENST00000475243 RALYLQ86SE5 291 aaKnown RBP13.29□□□□□ -0.28
VAPB-204ENST00000475243 SAFBQ15424 915 aaKnown RBP eCLIP13.27□□□□□ -0.28
VAPB-204ENST00000475243 ERC2O15083 957 aa13.27□□□□□ -0.28
VAPB-204ENST00000475243 IKQ13123 557 aaPredicted RBP13.27□□□□□ -0.28
VAPB-204ENST00000475243 NLRP6P59044 892 aa13.27□□□□□ -0.29
VAPB-204ENST00000475243 ZNF771Q7L3S4 317 aaPredicted RBP13.27□□□□□ -0.29
VAPB-204ENST00000475243 UBTFL1P0CB47 393 aaPredicted RBP13.27□□□□□ -0.29
VAPB-204ENST00000475243 GNAI1P63096 354 aa13.27□□□□□ -0.29
VAPB-204ENST00000475243 SETQ01105 290 aaPredicted RBP13.27□□□□□ -0.29
VAPB-204ENST00000475243 OSCARQ8IYS5 282 aa13.27□□□□□ -0.29
VAPB-204ENST00000475243 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
VAPB-204ENST00000475243 GPS2Q13227 327 aa13.26□□□□□ -0.29
VAPB-204ENST00000475243 KRI1Q8N9T8 703 aaKnown RBP13.26□□□□□ -0.29
VAPB-204ENST00000475243 C22orf23Q9BZE7 217 aa13.26□□□□□ -0.29
VAPB-204ENST00000475243 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
VAPB-204ENST00000475243 CHMP5Q9NZZ3 219 aa13.26□□□□□ -0.29
VAPB-204ENST00000475243 FAM13BQ9NYF5 915 aa13.25□□□□□ -0.29
VAPB-204ENST00000475243 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
VAPB-204ENST00000475243 MTHFSP49914 203 aa13.25□□□□□ -0.29
VAPB-204ENST00000475243 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
VAPB-204ENST00000475243 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
VAPB-204ENST00000475243 EPS15P42566 896 aa13.24□□□□□ -0.29
VAPB-204ENST00000475243 PDILTQ8N807 584 aa13.24□□□□□ -0.29
VAPB-204ENST00000475243 ATP2B1P20020 1258 aa13.24□□□□□ -0.29
VAPB-204ENST00000475243 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
VAPB-204ENST00000475243 C1orf115Q9H7X2 142 aa13.24□□□□□ -0.29
VAPB-204ENST00000475243 STRN4Q9NRL3 753 aa13.24□□□□□ -0.29
VAPB-204ENST00000475243 IFT57Q9NWB7 429 aa13.24□□□□□ -0.29
VAPB-204ENST00000475243 ZFYVE27Q5T4F4 411 aa13.24□□□□□ -0.29
VAPB-204ENST00000475243 CCDC73Q6ZRK6 1079 aa13.23□□□□□ -0.29
VAPB-204ENST00000475243 ODF2Q5BJF6 829 aa13.23□□□□□ -0.29
VAPB-204ENST00000475243 PPP1R1BQ9UD71 204 aaPredicted RBP13.23□□□□□ -0.29
VAPB-204ENST00000475243 HSP90AB4PQ58FF6 505 aa13.23□□□□□ -0.29
VAPB-204ENST00000475243 ESCO1Q5FWF5 840 aa13.23□□□□□ -0.29
VAPB-204ENST00000475243 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
VAPB-204ENST00000475243 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
VAPB-204ENST00000475243 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
VAPB-204ENST00000475243 FSD1Q9BTV5 496 aa13.22□□□□□ -0.29
VAPB-204ENST00000475243 SURF6O75683 361 aaKnown RBP13.22□□□□□ -0.29
VAPB-204ENST00000475243 CNTROBQ8N137 903 aa13.22□□□□□ -0.29
VAPB-204ENST00000475243 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
VAPB-204ENST00000475243 NUCB2P80303 420 aa13.22□□□□□ -0.29
VAPB-204ENST00000475243 RNF214Q8ND24 703 aa13.21□□□□□ -0.29
VAPB-204ENST00000475243 SDF4Q9BRK5 362 aa13.21□□□□□ -0.29
VAPB-204ENST00000475243 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.3
VAPB-204ENST00000475243 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
VAPB-204ENST00000475243 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.32e-6■■■■■ 124.7
VAPB-204ENST00000475243 CEBPZQ03701 1054 aaKnown RBP13.2□□□□□ -0.3
VAPB-204ENST00000475243 CDCA7LQ96GN5 454 aa13.2□□□□□ -0.3
VAPB-204ENST00000475243 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
VAPB-204ENST00000475243 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
VAPB-204ENST00000475243 OLFM4Q6UX06 510 aa13.2□□□□□ -0.3
VAPB-204ENST00000475243 NINLQ9Y2I6 1382 aa13.2□□□□□ -0.3
VAPB-204ENST00000475243 KIF6Q6ZMV9 814 aa13.19□□□□□ -0.3
VAPB-204ENST00000475243 R3HCC1Q9Y3T6 440 aaKnown RBP13.19□□□□□ -0.3
VAPB-204ENST00000475243 CLASRPQ8N2M8 674 aaKnown RBP13.19□□□□□ -0.3
VAPB-204ENST00000475243 ATP2B2Q01814 1243 aa13.19□□□□□ -0.3
VAPB-204ENST00000475243 SKIDA1Q1XH10 827 aa13.19□□□□□ -0.3
VAPB-204ENST00000475243 VSIG10Q8N0Z9 540 aa13.19□□□□□ -0.3
VAPB-204ENST00000475243 OFD1O75665 1012 aa13.19□□□□□ -0.3
VAPB-204ENST00000475243 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
VAPB-204ENST00000475243 RUFY1Q96T51 708 aa13.19□□□□□ -0.3
VAPB-204ENST00000475243 CCDC7Q96M83 1385 aa13.18□□□□□ -0.3
VAPB-204ENST00000475243 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
VAPB-204ENST00000475243 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
VAPB-204ENST00000475243 MYOM3Q5VTT5 1437 aa13.18□□□□□ -0.3
VAPB-204ENST00000475243 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
VAPB-204ENST00000475243 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.18□□□□□ -0.3
VAPB-204ENST00000475243 XBP1P17861 261 aa13.18□□□□□ -0.3
VAPB-204ENST00000475243 BRPF1P55201 1214 aaPredicted RBP13.18□□□□□ -0.3
VAPB-204ENST00000475243 CDC45O75419 566 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 RAD54L2Q9Y4B4 1467 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 ARHGAP5Q13017 1502 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 CFAP70Q5T0N1 1121 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 PSMA5P28066 241 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 TMEM132AQ24JP5 1023 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 HSP90AB2PQ58FF8 381 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 SIL1Q9H173 461 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 PRKAR2BP31323 418 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 CNNM1Q9NRU3 951 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 TCP11L2Q8N4U5 519 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 TEX35Q5T0J7 233 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 MNS1Q8NEH6 495 aa13.17□□□□□ -0.3
VAPB-204ENST00000475243 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
VAPB-204ENST00000475243 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
VAPB-204ENST00000475243 MYL6BP14649 208 aa13.16□□□□□ -0.3
VAPB-204ENST00000475243 NUTM2BA6NNL0 878 aaPredicted RBP13.16□□□□□ -0.3
VAPB-204ENST00000475243 NUTM2EB1AL46 878 aaPredicted RBP13.16□□□□□ -0.3
VAPB-204ENST00000475243 NEK4P51957 841 aa13.16□□□□□ -0.3
VAPB-204ENST00000475243 NUTM2AQ8IVF1 878 aaPredicted RBP13.16□□□□□ -0.3
VAPB-204ENST00000475243 AFAP1Q8N556 730 aa13.16□□□□□ -0.3
VAPB-204ENST00000475243 PRAM1Q96QH2 718 aa13.16□□□□□ -0.3
VAPB-204ENST00000475243 TXNDC2Q86VQ3 553 aa13.15□□□□□ -0.3
VAPB-204ENST00000475243 NOB1Q9ULX3 412 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms