RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 SENP3Q9H4L4 574 aaPredicted RBP13.93□□□□□ -0.18
PCCB-213ENST00000475214 ASXL1Q8IXJ9 1541 aa13.93□□□□□ -0.18
PCCB-213ENST00000475214 XIRP1Q702N8 1843 aaKnown RBP13.92□□□□□ -0.18
PCCB-213ENST00000475214 YTHDC2Q9H6S0 1430 aaKnown RBP13.92□□□□□ -0.18
PCCB-213ENST00000475214 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
PCCB-213ENST00000475214 STK26Q9P289 416 aa13.92□□□□□ -0.18
PCCB-213ENST00000475214 CNGB1Q14028 1251 aaPredicted RBP13.91□□□□□ -0.18
PCCB-213ENST00000475214 PUS7Q96PZ0 661 aaKnown RBP13.91□□□□□ -0.18
PCCB-213ENST00000475214 SLC26A8Q96RN1 970 aa13.91□□□□□ -0.18
PCCB-213ENST00000475214 MRS2Q9HD23 443 aa13.91□□□□□ -0.18
PCCB-213ENST00000475214 EVC2Q86UK5 1308 aa13.9□□□□□ -0.18
PCCB-213ENST00000475214 POGKQ9P215 609 aa13.9□□□□□ -0.18
PCCB-213ENST00000475214 PLEKHG1Q9ULL1 1385 aa13.9□□□□□ -0.18
PCCB-213ENST00000475214 LRPPRCP42704 1394 aaKnown RBP13.89□□□□□ -0.19
PCCB-213ENST00000475214 PROSER2Q86WR7 435 aaPredicted RBP13.89□□□□□ -0.19
PCCB-213ENST00000475214 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
PCCB-213ENST00000475214 MYOM1P52179 1685 aa13.88□□□□□ -0.19
PCCB-213ENST00000475214 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
PCCB-213ENST00000475214 DLC1Q96QB1 1528 aa13.88□□□□□ -0.19
PCCB-213ENST00000475214 MYBBP1AQ9BQG0 1328 aaKnown RBP13.88□□□□□ -0.19
PCCB-213ENST00000475214 NKTRP30414 1462 aaKnown RBP13.87□□□□□ -0.19
PCCB-213ENST00000475214 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
PCCB-213ENST00000475214 PRAM1Q96QH2 718 aa13.87□□□□□ -0.19
PCCB-213ENST00000475214 RGS17Q9UGC6 210 aaPredicted RBP13.87□□□□□ -0.19
PCCB-213ENST00000475214 TBX22Q9Y458 520 aa13.87□□□□□ -0.19
PCCB-213ENST00000475214 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
PCCB-213ENST00000475214 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
PCCB-213ENST00000475214 CCDC184Q52MB2 194 aa13.86□□□□□ -0.19
PCCB-213ENST00000475214 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
PCCB-213ENST00000475214 PARD3Q8TEW0 1356 aa13.85□□□□□ -0.19
PCCB-213ENST00000475214 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
PCCB-213ENST00000475214 BRD4O60885 1362 aaPredicted RBP13.84□□□□□ -0.19
PCCB-213ENST00000475214 MSH6P52701 1360 aa13.84□□□□□ -0.19
PCCB-213ENST00000475214 CC2D1BQ5T0F9 858 aaKnown RBP13.84□□□□□ -0.19
PCCB-213ENST00000475214 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
PCCB-213ENST00000475214 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
PCCB-213ENST00000475214 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
PCCB-213ENST00000475214 METP08581 1390 aa13.83□□□□□ -0.19
PCCB-213ENST00000475214 PIK3R4Q99570 1358 aa13.83□□□□□ -0.19
PCCB-213ENST00000475214 FAM9BQ8IZU0 186 aa13.83□□□□□ -0.2
PCCB-213ENST00000475214 MINK1Q8N4C8 1332 aaPredicted RBP13.83□□□□□ -0.2
PCCB-213ENST00000475214 NWD1Q149M9 1564 aa13.83□□□□□ -0.2
PCCB-213ENST00000475214 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
PCCB-213ENST00000475214 NCOA3Q9Y6Q9 1424 aa13.82□□□□□ -0.2
PCCB-213ENST00000475214 KNDC1Q76NI1 1749 aa13.82□□□□□ -0.2
PCCB-213ENST00000475214 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
PCCB-213ENST00000475214 NLRP13Q86W25 1043 aa13.82□□□□□ -0.2
PCCB-213ENST00000475214 DIP2AQ14689 1571 aa13.82□□□□□ -0.2
PCCB-213ENST00000475214 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
PCCB-213ENST00000475214 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
PCCB-213ENST00000475214 ADAMTS13Q76LX8 1427 aa13.81□□□□□ -0.2
PCCB-213ENST00000475214 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
PCCB-213ENST00000475214 ATAD2Q6PL18 1390 aa13.81□□□□□ -0.2
PCCB-213ENST00000475214 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
PCCB-213ENST00000475214 TECPR2O15040 1411 aa13.8□□□□□ -0.2
PCCB-213ENST00000475214 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCCB-213ENST00000475214 WAPLQ7Z5K2 1190 aa13.79□□□□□ -0.2
PCCB-213ENST00000475214 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
PCCB-213ENST00000475214 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
PCCB-213ENST00000475214 SLC12A5Q9H2X9 1139 aa13.79□□□□□ -0.2
PCCB-213ENST00000475214 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
PCCB-213ENST00000475214 SLAIN2Q9P270 581 aa13.78□□□□□ -0.2
PCCB-213ENST00000475214 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
PCCB-213ENST00000475214 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
PCCB-213ENST00000475214 ANKRD36BQ8N2N9 1353 aa13.77□□□□□ -0.21
PCCB-213ENST00000475214 PNISRQ8TF01 805 aaKnown RBP13.77□□□□□ -0.21
PCCB-213ENST00000475214 RBM33Q96EV2 1170 aaKnown RBP13.77□□□□□ -0.21
PCCB-213ENST00000475214 CARD14Q9BXL6 1004 aa13.77□□□□□ -0.21
PCCB-213ENST00000475214 PLEKHH1Q9ULM0 1364 aa13.77□□□□□ -0.21
PCCB-213ENST00000475214 NSD3Q9BZ95 1437 aa13.76□□□□□ -0.21
PCCB-213ENST00000475214 ATF3P18847 181 aa13.75□□□□□ -0.21
PCCB-213ENST00000475214 C19orf44Q9H6X5 657 aa13.75□□□□□ -0.21
PCCB-213ENST00000475214 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
PCCB-213ENST00000475214 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
PCCB-213ENST00000475214 CGNL1Q0VF96 1302 aa13.74□□□□□ -0.21
PCCB-213ENST00000475214 WASLO00401 505 aaPredicted RBP13.74□□□□□ -0.21
PCCB-213ENST00000475214 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
PCCB-213ENST00000475214 HDGFL2Q7Z4V5 671 aaPredicted RBP13.74□□□□□ -0.21
PCCB-213ENST00000475214 USP32Q8NFA0 1604 aa13.74□□□□□ -0.21
PCCB-213ENST00000475214 PHLPP1O60346 1717 aa13.73□□□□□ -0.21
PCCB-213ENST00000475214 ROBO2Q9HCK4 1378 aa13.72□□□□□ -0.21
PCCB-213ENST00000475214 NSD2O96028 1365 aa13.71□□□□□ -0.21
PCCB-213ENST00000475214 MORC1Q86VD1 984 aa13.71□□□□□ -0.21
PCCB-213ENST00000475214 PTPRUQ92729 1446 aa13.71□□□□□ -0.22
PCCB-213ENST00000475214 JCADQ9P266 1359 aa13.71□□□□□ -0.22
PCCB-213ENST00000475214 CABP1Q9NZU7 370 aa13.7□□□□□ -0.22
PCCB-213ENST00000475214 GTF3C3Q9Y5Q9 886 aa13.7□□□□□ -0.22
PCCB-213ENST00000475214 PTCH1Q13635 1447 aa13.7□□□□□ -0.22
PCCB-213ENST00000475214 A0A1W2PP64 1363 aa13.7□□□□□ -0.22
PCCB-213ENST00000475214 ZBED9Q6R2W3 1325 aa13.69□□□□□ -0.22
PCCB-213ENST00000475214 COL16A1Q07092 1604 aaPredicted RBP13.69□□□□□ -0.22
PCCB-213ENST00000475214 DCCP43146 1447 aa13.69□□□□□ -0.22
PCCB-213ENST00000475214 ADGRB2O60241 1585 aa13.69□□□□□ -0.22
PCCB-213ENST00000475214 ATP7BP35670 1465 aa13.68□□□□□ -0.22
PCCB-213ENST00000475214 NUDT16Q96DE0 195 aaKnown RBP13.68□□□□□ -0.22
PCCB-213ENST00000475214 INSRP06213 1382 aa13.68□□□□□ -0.22
PCCB-213ENST00000475214 CCDC61Q9Y6R9 512 aa13.67□□□□□ -0.22
PCCB-213ENST00000475214 XRN1Q8IZH2 1706 aaKnown RBP13.67□□□□□ -0.22
PCCB-213ENST00000475214 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.67□□□□□ -0.22
PCCB-213ENST00000475214 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms