RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 SYTL4Q96C24 671 aaPredicted RBP5.71□□□□□ -1.5
CCNL1-215ENST00000474539 CAMSAP2Q08AD1 1489 aa5.71□□□□□ -1.5
CCNL1-215ENST00000474539 UBAP1LF5GYI3 381 aa5.71□□□□□ -1.5
CCNL1-215ENST00000474539 C9orf78Q9NZ63 289 aaPredicted RBP5.71□□□□□ -1.5
CCNL1-215ENST00000474539 RUNDC1Q96C34 613 aa5.71□□□□□ -1.5
CCNL1-215ENST00000474539 ERC2O15083 957 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 CCDC30Q5VVM6 783 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 BRD4O60885 1362 aaPredicted RBP5.7□□□□□ -1.5
CCNL1-215ENST00000474539 HIP1O00291 1037 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 KRI1Q8N9T8 703 aaKnown RBP5.7□□□□□ -1.5
CCNL1-215ENST00000474539 LRRC59Q96AG4 307 aaKnown RBP5.7□□□□□ -1.5
CCNL1-215ENST00000474539 TMOD2Q9NZR1 351 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 EIF4G3O43432 1585 aaKnown RBP5.7□□□□□ -1.5
CCNL1-215ENST00000474539 CABP4P57796 275 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 SLF2Q8IX21 1173 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 DHX37Q8IY37 1157 aaKnown RBP5.7□□□□□ -1.5
CCNL1-215ENST00000474539 G3BP1Q13283 466 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCNL1-215ENST00000474539 PPP4R3BQ5MIZ7 849 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 HSCBQ8IWL3 235 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 PPP4R2Q9NY27 417 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 PHF8Q9UPP1 1060 aa5.7□□□□□ -1.5
CCNL1-215ENST00000474539 SHANK2Q9UPX8 1470 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 MARCH6O60337 910 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 POLD1P28340 1107 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 RNF20Q5VTR2 975 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 TTC21BQ7Z4L5 1316 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 KDM5BQ9UGL1 1544 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 GNAI3P08754 354 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 PIP4K2BP78356 416 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 ZSCAN25Q6NSZ9 544 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 CCAR1Q8IX12 1150 aaKnown RBP5.69□□□□□ -1.5
CCNL1-215ENST00000474539 IL27Q8NEV9 243 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 DNAI2Q9GZS0 605 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 TBC1D2BQ9UPU7 963 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 FKBP8Q14318 412 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 WWC2Q6AWC2 1192 aa5.69□□□□□ -1.5
CCNL1-215ENST00000474539 ERICH2A1L162 156 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 TRDNQ13061 729 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 SYAP1Q96A49 352 aaPredicted RBP5.68□□□□□ -1.5
CCNL1-215ENST00000474539 ARHGEF11O15085 1522 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 TCERG1O14776 1098 aaKnown RBP5.68□□□□□ -1.5
CCNL1-215ENST00000474539 ZNF287Q9HBT7 754 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 NAP1L2Q9ULW6 460 aaPredicted RBP5.68□□□□□ -1.5
CCNL1-215ENST00000474539 KIAA0556O60303 1618 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 NUTM2BA6NNL0 878 aaPredicted RBP5.68□□□□□ -1.5
CCNL1-215ENST00000474539 NUTM2EB1AL46 878 aaPredicted RBP5.68□□□□□ -1.5
CCNL1-215ENST00000474539 NUTM2DQ5VT03 806 aaPredicted RBP5.68□□□□□ -1.5
CCNL1-215ENST00000474539 ZKSCAN2Q63HK3 967 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 NUTM2AQ8IVF1 878 aaPredicted RBP5.68□□□□□ -1.5
CCNL1-215ENST00000474539 ITPRIPQ8IWB1 547 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 PRAM1Q96QH2 718 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 PANK3Q9H999 370 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 TRPM2O94759 1503 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 EXOC5O00471 708 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 RIC3Q7Z5B4 369 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 CDK19Q9BWU1 502 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 TSPYL4Q9UJ04 414 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 DDX19BQ9UMR2 479 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 ARAP1Q96P48 1450 aa5.68□□□□□ -1.5
CCNL1-215ENST00000474539 ST20-MTHFSA0A0A6YYL1 179 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 C19orf44Q9H6X5 657 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 ATP6V1DQ9Y5K8 247 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 RUSC2Q8N2Y8 1516 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 LMTK3Q96Q04 1460 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 TPM2P07951 284 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 TBX22Q9Y458 520 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 NKTRP30414 1462 aaKnown RBP5.67□□□□□ -1.5
CCNL1-215ENST00000474539 CTTNBP2Q8WZ74 1663 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 NUTM2FA1L443 756 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 XBP1P17861 261 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 KLHL34Q8N239 644 aa5.67□□□□□ -1.5
CCNL1-215ENST00000474539 ZPR1O75312 459 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 TRAF1Q13077 416 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 CLSTN1O94985 981 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 SART3Q15020 963 aaKnown RBP5.66□□□□□ -1.5
CCNL1-215ENST00000474539 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.66□□□□□ -1.51e-13■□□□□ 8.4
CCNL1-215ENST00000474539 STRN4Q9NRL3 753 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 AMOTL2Q9Y2J4 779 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 ARHGEF10O15013 1369 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 PPIP5K1Q6PFW1 1433 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 IFIT2P09913 472 aaKnown RBP5.66□□□□□ -1.5
CCNL1-215ENST00000474539 FLAD1Q8NFF5 587 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 HOOK1Q9UJC3 728 aaKnown RBP5.66□□□□□ -1.5
CCNL1-215ENST00000474539 ZFYVE16Q7Z3T8 1539 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 PDIA4P13667 645 aaKnown RBP5.66□□□□□ -1.5
CCNL1-215ENST00000474539 TRIM29Q14134 588 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 MPHOSPH6Q99547 160 aaKnown RBP5.66□□□□□ -1.5
CCNL1-215ENST00000474539 BRMS1Q9HCU9 246 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 ABCC11Q96J66 1382 aa5.66□□□□□ -1.5
CCNL1-215ENST00000474539 ZKSCAN1P17029 563 aaPredicted RBP5.65□□□□□ -1.5
CCNL1-215ENST00000474539 TRIM44Q96DX7 344 aaPredicted RBP5.65□□□□□ -1.5
CCNL1-215ENST00000474539 TMOD3Q9NYL9 352 aa5.65□□□□□ -1.5
CCNL1-215ENST00000474539 MAPKBP1O60336 1514 aa5.65□□□□□ -1.5
CCNL1-215ENST00000474539 ATF7IPQ6VMQ6 1270 aa5.65□□□□□ -1.5
CCNL1-215ENST00000474539 NUDT16Q96DE0 195 aaKnown RBP5.65□□□□□ -1.5
CCNL1-215ENST00000474539 CCDC43Q96MW1 224 aaKnown RBP5.65□□□□□ -1.5
CCNL1-215ENST00000474539 DNAJC5Q9H3Z4 198 aa5.65□□□□□ -1.5
CCNL1-215ENST00000474539 PTPN23Q9H3S7 1636 aa5.65□□□□□ -1.51
CCNL1-215ENST00000474539 CEP89Q96ST8 783 aa5.65□□□□□ -1.51
CCNL1-215ENST00000474539 RCAN3Q9UKA8 241 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms