RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 BARGINQ6ZT62 677 aa12.08□□□□□ -0.48
VPS50-211ENST00000474412 KIF27Q86VH2 1401 aa12.08□□□□□ -0.48
VPS50-211ENST00000474412 NLRP7Q8WX94 980 aa12.07□□□□□ -0.48
VPS50-211ENST00000474412 PHOX2BQ99453 314 aa12.05□□□□□ -0.48
VPS50-211ENST00000474412 ADCY10Q96PN6 1610 aa12.04□□□□□ -0.48
VPS50-211ENST00000474412 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
VPS50-211ENST00000474412 IGF1RP08069 1367 aa12.03□□□□□ -0.48
VPS50-211ENST00000474412 IQGAP2Q13576 1575 aa12.02□□□□□ -0.49
VPS50-211ENST00000474412 PLA2G2EQ9NZK7 142 aa12.02□□□□□ -0.49
VPS50-211ENST00000474412 PRG4Q92954 1404 aaPredicted RBP12.02□□□□□ -0.49
VPS50-211ENST00000474412 RSPH4AQ5TD94 716 aa12.01□□□□□ -0.49
VPS50-211ENST00000474412 DDX11L8A8MPP1 907 aa11.99□□□□□ -0.49
VPS50-211ENST00000474412 APLP1P51693 650 aa11.99□□□□□ -0.49
VPS50-211ENST00000474412 MDM2Q00987 491 aaPredicted RBP11.99□□□□□ -0.49
VPS50-211ENST00000474412 RDH13Q8NBN7 331 aa11.99□□□□□ -0.49
VPS50-211ENST00000474412 PRR14Q9BWN1 585 aa11.99□□□□□ -0.49
VPS50-211ENST00000474412 KIAA0586Q9BVV6 1533 aa11.99□□□□□ -0.49
VPS50-211ENST00000474412 CFHP08603 1231 aa11.98□□□□□ -0.49
VPS50-211ENST00000474412 KMT5BQ4FZB7 885 aa11.98□□□□□ -0.49
VPS50-211ENST00000474412 SULF1Q8IWU6 871 aa11.97□□□□□ -0.49
VPS50-211ENST00000474412 CARMIL1Q5VZK9 1371 aa11.96□□□□□ -0.49
VPS50-211ENST00000474412 SLC10A3P09131 477 aa11.96□□□□□ -0.49
VPS50-211ENST00000474412 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
VPS50-211ENST00000474412 CLCN1P35523 988 aa11.94□□□□□ -0.5
VPS50-211ENST00000474412 TSPOAP1O95153 1857 aa11.93□□□□□ -0.5
VPS50-211ENST00000474412 TTLL12Q14166 644 aaPredicted RBP11.93□□□□□ -0.5
VPS50-211ENST00000474412 AK7Q96M32 723 aa11.93□□□□□ -0.5
VPS50-211ENST00000474412 GPCPD1Q9NPB8 672 aa11.93□□□□□ -0.5
VPS50-211ENST00000474412 RAPGEF2Q9Y4G8 1499 aa11.93□□□□□ -0.5
VPS50-211ENST00000474412 DIP2BQ9P265 1576 aa11.92□□□□□ -0.5
VPS50-211ENST00000474412 MTRQ99707 1265 aa11.92□□□□□ -0.5
VPS50-211ENST00000474412 SLC24A3Q9HC58 644 aa11.92□□□□□ -0.5
VPS50-211ENST00000474412 PCDHB3Q9Y5E6 796 aa11.92□□□□□ -0.5
VPS50-211ENST00000474412 DISP1Q96F81 1524 aa11.91□□□□□ -0.5
VPS50-211ENST00000474412 ITGBL1O95965 494 aaPredicted RBP11.91□□□□□ -0.5
VPS50-211ENST00000474412 KCNC4Q03721 635 aa11.91□□□□□ -0.5
VPS50-211ENST00000474412 ACTN4O43707 911 aaKnown RBP11.9□□□□□ -0.5
VPS50-211ENST00000474412 IL21Q9HBE4 155 aa11.9□□□□□ -0.5
VPS50-211ENST00000474412 UGGT2Q9NYU1 1516 aa11.9□□□□□ -0.5
VPS50-211ENST00000474412 TRIM66O15016 1216 aa11.89□□□□□ -0.51
VPS50-211ENST00000474412 COPS2P61201 443 aa11.89□□□□□ -0.51
VPS50-211ENST00000474412 AMHR2Q16671 573 aa11.89□□□□□ -0.51
VPS50-211ENST00000474412 MAPKBP1O60336 1514 aa11.89□□□□□ -0.51
VPS50-211ENST00000474412 TJAP1Q5JTD0 557 aa11.88□□□□□ -0.51
VPS50-211ENST00000474412 ZCCHC11Q5TAX3 1644 aaKnown RBP11.88□□□□□ -0.51
VPS50-211ENST00000474412 PRXQ9BXM0 1461 aa11.87□□□□□ -0.51
VPS50-211ENST00000474412 PPRC1Q5VV67 1664 aaKnown RBP11.87□□□□□ -0.51
VPS50-211ENST00000474412 ABCC2Q92887 1545 aa11.86□□□□□ -0.51
VPS50-211ENST00000474412 IFFO2Q5TF58 517 aa11.86□□□□□ -0.51
VPS50-211ENST00000474412 CD46P15529 392 aa11.85□□□□□ -0.51
VPS50-211ENST00000474412 GCGRP47871 477 aa11.85□□□□□ -0.51
VPS50-211ENST00000474412 BLOC1S3Q6QNY0 202 aa11.85□□□□□ -0.51
VPS50-211ENST00000474412 TMUB1Q9BVT8 246 aa11.85□□□□□ -0.51
VPS50-211ENST00000474412 REPIN1Q9BWE0 567 aaKnown RBP11.85□□□□□ -0.51
VPS50-211ENST00000474412 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
VPS50-211ENST00000474412 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
VPS50-211ENST00000474412 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
VPS50-211ENST00000474412 FUT2Q10981 343 aa11.82□□□□□ -0.52
VPS50-211ENST00000474412 SAMD9Q5K651 1589 aa11.82□□□□□ -0.52
VPS50-211ENST00000474412 NR1I2O75469 434 aa11.81□□□□□ -0.52
VPS50-211ENST00000474412 SSTR3P32745 418 aaPredicted RBP11.81□□□□□ -0.52
VPS50-211ENST00000474412 PUS10Q3MIT2 529 aaKnown RBP11.81□□□□□ -0.52
VPS50-211ENST00000474412 PARP9Q8IXQ6 854 aa11.81□□□□□ -0.52
VPS50-211ENST00000474412 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
VPS50-211ENST00000474412 TTBK1Q5TCY1 1321 aaPredicted RBP11.81□□□□□ -0.52
VPS50-211ENST00000474412 CARMIL2Q6F5E8 1435 aa11.8□□□□□ -0.52
VPS50-211ENST00000474412 KIF21BO75037 1637 aa11.8□□□□□ -0.52
VPS50-211ENST00000474412 ZPR1O75312 459 aa11.8□□□□□ -0.52
VPS50-211ENST00000474412 PDE4DQ08499 809 aa11.8□□□□□ -0.52
VPS50-211ENST00000474412 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
VPS50-211ENST00000474412 ABCA8O94911 1581 aa11.79□□□□□ -0.52
VPS50-211ENST00000474412 A0A0G2JS52 829 aa11.79□□□□□ -0.52
VPS50-211ENST00000474412 ATP6V1AP38606 617 aa11.79□□□□□ -0.52
VPS50-211ENST00000474412 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
VPS50-211ENST00000474412 PTPRGP23470 1445 aa11.78□□□□□ -0.52
VPS50-211ENST00000474412 KDM4AO75164 1064 aa11.78□□□□□ -0.52
VPS50-211ENST00000474412 TPRNQ4KMQ1 711 aa11.78□□□□□ -0.52
VPS50-211ENST00000474412 MAP3K4Q9Y6R4 1608 aa11.78□□□□□ -0.52
VPS50-211ENST00000474412 UHRF1BP1LA0JNW5 1464 aa11.77□□□□□ -0.52
VPS50-211ENST00000474412 NUTM1Q86Y26 1132 aa11.77□□□□□ -0.53
VPS50-211ENST00000474412 PLB1Q6P1J6 1458 aa11.76□□□□□ -0.53
VPS50-211ENST00000474412 KDM6BO15054 1643 aa11.76□□□□□ -0.53
VPS50-211ENST00000474412 TLL1O43897 1013 aa11.76□□□□□ -0.53
VPS50-211ENST00000474412 MORN1Q5T089 497 aa11.76□□□□□ -0.53
VPS50-211ENST00000474412 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
VPS50-211ENST00000474412 NKX2-3Q8TAU0 364 aa11.75□□□□□ -0.53
VPS50-211ENST00000474412 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
VPS50-211ENST00000474412 KDM5BQ9UGL1 1544 aa11.75□□□□□ -0.53
VPS50-211ENST00000474412 USP46P62068 366 aa11.74□□□□□ -0.53
VPS50-211ENST00000474412 GLI2P10070 1586 aa11.73□□□□□ -0.53
VPS50-211ENST00000474412 ASXL2Q76L83 1435 aa11.73□□□□□ -0.53
VPS50-211ENST00000474412 RAPGEF6Q8TEU7 1601 aa11.73□□□□□ -0.53
VPS50-211ENST00000474412 BEGAINQ9BUH8 593 aa11.73□□□□□ -0.53
VPS50-211ENST00000474412 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
VPS50-211ENST00000474412 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
VPS50-211ENST00000474412 EEA1Q15075 1411 aa11.71□□□□□ -0.53
VPS50-211ENST00000474412 MS4A1P11836 297 aa11.71□□□□□ -0.53
VPS50-211ENST00000474412 LRRIQ1Q96JM4 1722 aa11.71□□□□□ -0.54
VPS50-211ENST00000474412 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.54
VPS50-211ENST00000474412 HOXA2O43364 376 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms