RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 HSP90AA1P07900 732 aaKnown RBP18.65■□□□□ 0.58
SAMM50-203ENST00000474323 SIGLEC1Q9BZZ2 1709 aa18.65■□□□□ 0.58
SAMM50-203ENST00000474323 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
SAMM50-203ENST00000474323 EIF3AQ14152 1382 aaKnown RBP18.64■□□□□ 0.57
SAMM50-203ENST00000474323 MROH2AA6NES4 1674 aa18.64■□□□□ 0.57
SAMM50-203ENST00000474323 ZC3H13Q5T200 1668 aaKnown RBP18.63■□□□□ 0.57
SAMM50-203ENST00000474323 GOLGA6L3A6NEY3 463 aa18.63■□□□□ 0.57
SAMM50-203ENST00000474323 ANTXR1Q9H6X2 564 aa18.63■□□□□ 0.57
SAMM50-203ENST00000474323 FSD2A1L4K1 749 aa18.63■□□□□ 0.57
SAMM50-203ENST00000474323 XRCC6P12956 609 aaKnown RBP eCLIP18.63■□□□□ 0.57
SAMM50-203ENST00000474323 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
SAMM50-203ENST00000474323 GPRASP1Q5JY77 1395 aa18.63■□□□□ 0.57
SAMM50-203ENST00000474323 GOLGA2Q08379 1002 aa18.62■□□□□ 0.57
SAMM50-203ENST00000474323 ZNF521Q96K83 1311 aa18.61■□□□□ 0.57
SAMM50-203ENST00000474323 ADAMTS8Q9UP79 889 aa18.61■□□□□ 0.57
SAMM50-203ENST00000474323 SLKQ9H2G2 1235 aaPredicted RBP18.61■□□□□ 0.57
SAMM50-203ENST00000474323 NEURL4Q96JN8 1562 aa18.6■□□□□ 0.57
SAMM50-203ENST00000474323 MAPK8IP3Q9UPT6 1336 aa18.6■□□□□ 0.57
SAMM50-203ENST00000474323 MLECQ14165 292 aa18.6■□□□□ 0.57
SAMM50-203ENST00000474323 REREQ9P2R6 1566 aa18.6■□□□□ 0.57
SAMM50-203ENST00000474323 NOS1P29475 1434 aa18.59■□□□□ 0.57
SAMM50-203ENST00000474323 PLEKHH1Q9ULM0 1364 aa18.59■□□□□ 0.57
SAMM50-203ENST00000474323 PDIA4P13667 645 aaKnown RBP18.59■□□□□ 0.57
SAMM50-203ENST00000474323 ARHGEF40Q8TER5 1519 aa18.59■□□□□ 0.57
SAMM50-203ENST00000474323 STAC3Q96MF2 364 aa18.59■□□□□ 0.57
SAMM50-203ENST00000474323 ARHGAP31Q2M1Z3 1444 aa18.58■□□□□ 0.57
SAMM50-203ENST00000474323 LAMC1P11047 1609 aa18.58■□□□□ 0.57
SAMM50-203ENST00000474323 SYNMO15061 1565 aa18.58■□□□□ 0.57
SAMM50-203ENST00000474323 ADGRB3O60242 1522 aa18.58■□□□□ 0.57
SAMM50-203ENST00000474323 AGLP35573 1532 aa18.57■□□□□ 0.56
SAMM50-203ENST00000474323 ADGRF5Q8IZF2 1346 aa18.57■□□□□ 0.56
SAMM50-203ENST00000474323 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
SAMM50-203ENST00000474323 PANK3Q9H999 370 aa18.56■□□□□ 0.56
SAMM50-203ENST00000474323 SEC24BO95487 1268 aa18.56■□□□□ 0.56
SAMM50-203ENST00000474323 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
SAMM50-203ENST00000474323 SLFN5Q08AF3 891 aa18.56■□□□□ 0.56
SAMM50-203ENST00000474323 NLRP1Q9C000 1473 aa18.55■□□□□ 0.56
SAMM50-203ENST00000474323 TRMT2AQ8IZ69 625 aaKnown RBP18.55■□□□□ 0.56
SAMM50-203ENST00000474323 FBXO31Q5XUX0 539 aaPredicted RBP18.54■□□□□ 0.56
SAMM50-203ENST00000474323 MYOM2P54296 1465 aa18.54■□□□□ 0.56
SAMM50-203ENST00000474323 PIK3C2BO00750 1634 aa18.54■□□□□ 0.56
SAMM50-203ENST00000474323 IGHDP01880 384 aa18.54■□□□□ 0.56
SAMM50-203ENST00000474323 WDR43Q15061 677 aaKnown RBP eCLIP18.54■□□□□ 0.56
SAMM50-203ENST00000474323 PREX1Q8TCU6 1659 aa18.54■□□□□ 0.56
SAMM50-203ENST00000474323 CLTCQ00610 1675 aaKnown RBP18.53■□□□□ 0.56
SAMM50-203ENST00000474323 MRE11P49959 708 aa18.53■□□□□ 0.56
SAMM50-203ENST00000474323 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
SAMM50-203ENST00000474323 UPF2Q9HAU5 1272 aaKnown RBP18.53■□□□□ 0.56
SAMM50-203ENST00000474323 MCM4P33991 863 aa18.53■□□□□ 0.56
SAMM50-203ENST00000474323 IDI1Q13907 227 aa18.53■□□□□ 0.56
SAMM50-203ENST00000474323 CGNL1Q0VF96 1302 aa18.51■□□□□ 0.55
SAMM50-203ENST00000474323 TESK2Q96S53 571 aa18.51■□□□□ 0.55
SAMM50-203ENST00000474323 PANK2Q9BZ23 570 aa18.51■□□□□ 0.55
SAMM50-203ENST00000474323 PPLO60437 1756 aa18.51■□□□□ 0.55
SAMM50-203ENST00000474323 ZMYM3Q14202 1370 aa18.51■□□□□ 0.55
SAMM50-203ENST00000474323 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
SAMM50-203ENST00000474323 TBC1D32Q96NH3 1257 aa18.5■□□□□ 0.55
SAMM50-203ENST00000474323 TBC1D2Q9BYX2 928 aa18.5■□□□□ 0.55
SAMM50-203ENST00000474323 ISY1Q9ULR0 285 aaKnown RBP18.5■□□□□ 0.55
SAMM50-203ENST00000474323 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
SAMM50-203ENST00000474323 DISP3Q9P2K9 1392 aa18.5■□□□□ 0.55
SAMM50-203ENST00000474323 NKTRP30414 1462 aaKnown RBP18.5■□□□□ 0.55
SAMM50-203ENST00000474323 KIAA1210Q9ULL0 1709 aa18.49■□□□□ 0.55
SAMM50-203ENST00000474323 PDE3AQ14432 1141 aa18.49■□□□□ 0.55
SAMM50-203ENST00000474323 PPP6R1Q9UPN7 881 aa18.49■□□□□ 0.55
SAMM50-203ENST00000474323 SLC52A1Q9NWF4 448 aa18.48■□□□□ 0.55
SAMM50-203ENST00000474323 TMF1P82094 1093 aa18.48■□□□□ 0.55
SAMM50-203ENST00000474323 SCAF11Q99590 1463 aaKnown RBP18.47■□□□□ 0.55
SAMM50-203ENST00000474323 NRXN1Q9ULB1 1477 aa18.47■□□□□ 0.55
SAMM50-203ENST00000474323 NINLQ9Y2I6 1382 aa18.47■□□□□ 0.55
SAMM50-203ENST00000474323 MYH16Q9H6N6 1097 aa18.47■□□□□ 0.55
SAMM50-203ENST00000474323 MYO5BQ9ULV0 1848 aa18.47■□□□□ 0.55
SAMM50-203ENST00000474323 ESPNB1AK53 854 aa18.47■□□□□ 0.55
SAMM50-203ENST00000474323 PPP2R1AP30153 589 aa18.47■□□□□ 0.55
SAMM50-203ENST00000474323 ERVK-7P63135 1459 aa18.46■□□□□ 0.55
SAMM50-203ENST00000474323 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
SAMM50-203ENST00000474323 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
SAMM50-203ENST00000474323 TRAK2O60296 914 aa18.46■□□□□ 0.55
SAMM50-203ENST00000474323 BCAR3O75815 825 aa18.46■□□□□ 0.55
SAMM50-203ENST00000474323 ESF1Q9H501 851 aaKnown RBP18.45■□□□□ 0.54
SAMM50-203ENST00000474323 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
SAMM50-203ENST00000474323 GZF1Q9H116 711 aaPredicted RBP18.45■□□□□ 0.54
SAMM50-203ENST00000474323 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
SAMM50-203ENST00000474323 CHMP5Q9NZZ3 219 aa18.44■□□□□ 0.54
SAMM50-203ENST00000474323 E9PSI1 815 aa18.44■□□□□ 0.54
SAMM50-203ENST00000474323 PIK3C2GO75747 1445 aa18.44■□□□□ 0.54
SAMM50-203ENST00000474323 TPM2P07951 284 aa18.44■□□□□ 0.54
SAMM50-203ENST00000474323 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
SAMM50-203ENST00000474323 AAMPQ13685 434 aa18.43■□□□□ 0.54
SAMM50-203ENST00000474323 GRPEL1Q9HAV7 217 aa18.43■□□□□ 0.54
SAMM50-203ENST00000474323 CENPJQ9HC77 1338 aaPredicted RBP18.42■□□□□ 0.54
SAMM50-203ENST00000474323 TMEM131LA2VDJ0 1609 aa18.42■□□□□ 0.54
SAMM50-203ENST00000474323 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
SAMM50-203ENST00000474323 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
SAMM50-203ENST00000474323 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
SAMM50-203ENST00000474323 PMFBP1Q8TBY8 1022 aa18.41■□□□□ 0.54
SAMM50-203ENST00000474323 PDCL3Q9H2J4 239 aa18.41■□□□□ 0.54
SAMM50-203ENST00000474323 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
SAMM50-203ENST00000474323 C14orf93Q9H972 538 aaKnown RBP18.4■□□□□ 0.54
SAMM50-203ENST00000474323 SPINK5Q9NQ38 1064 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms