RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
SSBP1-209ENST00000473783 PSDA5PKW4 1024 aaPredicted RBP16.51■□□□□ 0.23
SSBP1-209ENST00000473783 SLIT2O94813 1529 aa16.5■□□□□ 0.23
SSBP1-209ENST00000473783 UNC5CLQ8IV45 518 aa16.49■□□□□ 0.23
SSBP1-209ENST00000473783 PXDNQ92626 1479 aa16.48■□□□□ 0.23
SSBP1-209ENST00000473783 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
SSBP1-209ENST00000473783 YY1P25490 414 aa16.47■□□□□ 0.23
SSBP1-209ENST00000473783 BAG6P46379 1132 aa16.47■□□□□ 0.23
SSBP1-209ENST00000473783 SEPT12Q8IYM1 358 aa16.46■□□□□ 0.23
SSBP1-209ENST00000473783 USP32Q8NFA0 1604 aa16.45■□□□□ 0.22
SSBP1-209ENST00000473783 PRAG1Q86YV5 1406 aa16.45■□□□□ 0.22
SSBP1-209ENST00000473783 RGPD1P0DJD0 1748 aa16.44■□□□□ 0.22
SSBP1-209ENST00000473783 NWD2Q9ULI1 1742 aa16.43■□□□□ 0.22
SSBP1-209ENST00000473783 KRT27Q7Z3Y8 459 aa16.43■□□□□ 0.22
SSBP1-209ENST00000473783 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
SSBP1-209ENST00000473783 ROBO2Q9HCK4 1378 aa16.42■□□□□ 0.22
SSBP1-209ENST00000473783 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
SSBP1-209ENST00000473783 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
SSBP1-209ENST00000473783 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
SSBP1-209ENST00000473783 HFM1A2PYH4 1435 aa16.41■□□□□ 0.22
SSBP1-209ENST00000473783 PLCH1Q4KWH8 1693 aa16.4■□□□□ 0.22
SSBP1-209ENST00000473783 LRPPRCP42704 1394 aaKnown RBP16.4■□□□□ 0.22
SSBP1-209ENST00000473783 VPS72Q15906 364 aa16.4■□□□□ 0.22
SSBP1-209ENST00000473783 R3HDM1Q15032 1099 aaKnown RBP16.39■□□□□ 0.21
SSBP1-209ENST00000473783 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
SSBP1-209ENST00000473783 DISP2A7MBM2 1401 aa16.37■□□□□ 0.21
SSBP1-209ENST00000473783 FOXO3O43524 673 aa16.37■□□□□ 0.21
SSBP1-209ENST00000473783 XPCQ01831 940 aaPredicted RBP16.36■□□□□ 0.21
SSBP1-209ENST00000473783 EN1Q05925 392 aaPredicted RBP16.35■□□□□ 0.21
SSBP1-209ENST00000473783 TNS1Q9HBL0 1735 aaKnown RBP16.35■□□□□ 0.21
SSBP1-209ENST00000473783 KIF1BO60333 1816 aa16.35■□□□□ 0.21
SSBP1-209ENST00000473783 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
SSBP1-209ENST00000473783 APLP2Q06481 763 aa16.34■□□□□ 0.21
SSBP1-209ENST00000473783 CCDC9Q9Y3X0 531 aaKnown RBP16.34■□□□□ 0.21
SSBP1-209ENST00000473783 SPATA31A3Q5VYP0 1347 aa16.34■□□□□ 0.21
SSBP1-209ENST00000473783 NUP155O75694 1391 aa16.34■□□□□ 0.21
SSBP1-209ENST00000473783 CLTCL1P53675 1640 aa16.33■□□□□ 0.2
SSBP1-209ENST00000473783 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
SSBP1-209ENST00000473783 FAM50AQ14320 339 aaKnown RBP16.32■□□□□ 0.2
SSBP1-209ENST00000473783 ABCA3Q99758 1704 aa16.32■□□□□ 0.2
SSBP1-209ENST00000473783 ADGRB2O60241 1585 aa16.31■□□□□ 0.2
SSBP1-209ENST00000473783 A0A0G2JS52 829 aa16.31■□□□□ 0.2
SSBP1-209ENST00000473783 MYT1Q01538 1121 aa16.31■□□□□ 0.2
SSBP1-209ENST00000473783 ROCK1Q13464 1354 aa16.3■□□□□ 0.2
SSBP1-209ENST00000473783 HAP1P54257 671 aaPredicted RBP16.3■□□□□ 0.2
SSBP1-209ENST00000473783 NRAPQ86VF7 1730 aa16.29■□□□□ 0.2
SSBP1-209ENST00000473783 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
SSBP1-209ENST00000473783 IFFO2Q5TF58 517 aa16.29■□□□□ 0.2
SSBP1-209ENST00000473783 NAIPQ13075 1403 aa16.28■□□□□ 0.2
SSBP1-209ENST00000473783 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
SSBP1-209ENST00000473783 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
SSBP1-209ENST00000473783 FMN2Q9NZ56 1722 aa16.27■□□□□ 0.19
SSBP1-209ENST00000473783 PARD3Q8TEW0 1356 aa16.26■□□□□ 0.19
SSBP1-209ENST00000473783 EZH2Q15910 746 aaKnown RBP16.26■□□□□ 0.19
SSBP1-209ENST00000473783 FAM98CQ17RN3 349 aaKnown RBP16.26■□□□□ 0.19
SSBP1-209ENST00000473783 NINLQ9Y2I6 1382 aa16.26■□□□□ 0.19
SSBP1-209ENST00000473783 RREB1Q92766 1687 aa16.25■□□□□ 0.19
SSBP1-209ENST00000473783 THSD7AQ9UPZ6 1657 aa16.24■□□□□ 0.19
SSBP1-209ENST00000473783 KRT28Q7Z3Y7 464 aa16.24■□□□□ 0.19
SSBP1-209ENST00000473783 CAMKK2Q96RR4 588 aa16.24■□□□□ 0.19
SSBP1-209ENST00000473783 NUTM2FA1L443 756 aa16.23■□□□□ 0.19
SSBP1-209ENST00000473783 PPLO60437 1756 aa16.23■□□□□ 0.19
SSBP1-209ENST00000473783 NUP188Q5SRE5 1749 aa16.22■□□□□ 0.19
SSBP1-209ENST00000473783 CABLES1Q8TDN4 633 aa16.22■□□□□ 0.19
SSBP1-209ENST00000473783 ARHGEF10O15013 1369 aa16.22■□□□□ 0.19
SSBP1-209ENST00000473783 TECPR2O15040 1411 aa16.21■□□□□ 0.19
SSBP1-209ENST00000473783 FAM182BQ5T319 152 aa16.21■□□□□ 0.19
SSBP1-209ENST00000473783 PPP1R1BQ9UD71 204 aaPredicted RBP16.21■□□□□ 0.19
SSBP1-209ENST00000473783 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.18
SSBP1-209ENST00000473783 COL14A1Q05707 1796 aaKnown RBP16.21■□□□□ 0.18
SSBP1-209ENST00000473783 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
SSBP1-209ENST00000473783 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
SSBP1-209ENST00000473783 PSME1Q06323 249 aa16.2■□□□□ 0.18
SSBP1-209ENST00000473783 SBNO1A3KN83 1393 aa16.2■□□□□ 0.18
SSBP1-209ENST00000473783 CAMTA1Q9Y6Y1 1673 aa16.2■□□□□ 0.18
SSBP1-209ENST00000473783 RPGRIP1LQ68CZ1 1315 aa16.19■□□□□ 0.18
SSBP1-209ENST00000473783 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
SSBP1-209ENST00000473783 SPON1Q9HCB6 807 aa16.19■□□□□ 0.18
SSBP1-209ENST00000473783 ZNF784Q8NCA9 323 aaPredicted RBP16.18■□□□□ 0.18
SSBP1-209ENST00000473783 IFT172Q9UG01 1749 aa16.18■□□□□ 0.18
SSBP1-209ENST00000473783 BTG4Q9NY30 223 aa16.17■□□□□ 0.18
SSBP1-209ENST00000473783 SPATA31A5Q5VU36 1347 aa16.17■□□□□ 0.18
SSBP1-209ENST00000473783 SPATA31A7Q8IWB4 1347 aa16.17■□□□□ 0.18
SSBP1-209ENST00000473783 CHD4Q14839 1912 aa16.16■□□□□ 0.18
SSBP1-209ENST00000473783 NBPF8Q3BBV2 869 aa16.16■□□□□ 0.18
SSBP1-209ENST00000473783 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
SSBP1-209ENST00000473783 FAM196AQ6ZSG2 479 aa16.16■□□□□ 0.18
SSBP1-209ENST00000473783 RRBP1Q9P2E9 1410 aaKnown RBP16.16■□□□□ 0.18
SSBP1-209ENST00000473783 KCNQ2O43526 872 aa16.15■□□□□ 0.18
SSBP1-209ENST00000473783 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
SSBP1-209ENST00000473783 TRIM37O94972 964 aa16.15■□□□□ 0.18
SSBP1-209ENST00000473783 APBA3O96018 575 aa16.15■□□□□ 0.18
SSBP1-209ENST00000473783 WAPLQ7Z5K2 1190 aa16.15■□□□□ 0.18
SSBP1-209ENST00000473783 NRXN1Q9ULB1 1477 aa16.15■□□□□ 0.18
SSBP1-209ENST00000473783 LMOD2Q6P5Q4 547 aa16.14■□□□□ 0.17
SSBP1-209ENST00000473783 PHF8Q9UPP1 1060 aa16.14■□□□□ 0.17
SSBP1-209ENST00000473783 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
SSBP1-209ENST00000473783 C1QTNF8P60827 252 aa16.12■□□□□ 0.17
SSBP1-209ENST00000473783 PLEKHH1Q9ULM0 1364 aa16.12■□□□□ 0.17
SSBP1-209ENST00000473783 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms