RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 KDM4AO75164 1064 aa9.46□□□□□ -0.9
GINS1-202ENST00000473460 MMP16P51512 607 aa9.46□□□□□ -0.9
GINS1-202ENST00000473460 CD2BP2O95400 341 aaKnown RBP9.45□□□□□ -0.9
GINS1-202ENST00000473460 Q3C1V9 767 aa9.44□□□□□ -0.9
GINS1-202ENST00000473460 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
GINS1-202ENST00000473460 HOXA2O43364 376 aa9.42□□□□□ -0.9
GINS1-202ENST00000473460 DXOO77932 396 aaKnown RBP9.42□□□□□ -0.9
GINS1-202ENST00000473460 AVPP01185 164 aa9.42□□□□□ -0.9
GINS1-202ENST00000473460 USB1Q9BQ65 265 aaKnown RBP9.42□□□□□ -0.9
GINS1-202ENST00000473460 USP46P62068 366 aa9.41□□□□□ -0.9
GINS1-202ENST00000473460 GUCA2AQ02747 115 aa9.41□□□□□ -0.9
GINS1-202ENST00000473460 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
GINS1-202ENST00000473460 CRIPAKQ8N1N5 446 aa9.41□□□□□ -0.9
GINS1-202ENST00000473460 GPCPD1Q9NPB8 672 aa9.41□□□□□ -0.9
GINS1-202ENST00000473460 FAM217BQ9NTX9 383 aaPredicted RBP9.41□□□□□ -0.9
GINS1-202ENST00000473460 DACH1Q9UI36 760 aa9.41□□□□□ -0.9
GINS1-202ENST00000473460 ZBTB24O43167 697 aaPredicted RBP9.4□□□□□ -0.9
GINS1-202ENST00000473460 CYP4X1Q8N118 509 aa9.4□□□□□ -0.9
GINS1-202ENST00000473460 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
GINS1-202ENST00000473460 TRIM32Q13049 653 aa9.39□□□□□ -0.91
GINS1-202ENST00000473460 WNT7AO00755 349 aa9.38□□□□□ -0.91
GINS1-202ENST00000473460 CLCN1P35523 988 aa9.37□□□□□ -0.91
GINS1-202ENST00000473460 SYMPKQ92797 1274 aaKnown RBP9.37□□□□□ -0.91
GINS1-202ENST00000473460 SMPD1P17405 629 aa9.35□□□□□ -0.91
GINS1-202ENST00000473460 SMCPP49901 116 aaPredicted RBP9.35□□□□□ -0.91
GINS1-202ENST00000473460 TTC24A2A3L6 582 aaPredicted RBP9.34□□□□□ -0.91
GINS1-202ENST00000473460 SKOR1P84550 965 aa9.34□□□□□ -0.91
GINS1-202ENST00000473460 SNIP1Q8TAD8 396 aaKnown RBP9.34□□□□□ -0.91
GINS1-202ENST00000473460 MRGPRX2Q96LB1 330 aa9.34□□□□□ -0.91
GINS1-202ENST00000473460 AXIN1O15169 862 aa9.33□□□□□ -0.92
GINS1-202ENST00000473460 JUNDP17535 347 aa9.33□□□□□ -0.92
GINS1-202ENST00000473460 CTC1Q2NKJ3 1217 aa9.33□□□□□ -0.92
GINS1-202ENST00000473460 J3QL48 77 aa9.32□□□□□ -0.92
GINS1-202ENST00000473460 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
GINS1-202ENST00000473460 CCDC24Q8N4L8 307 aa9.32□□□□□ -0.92
GINS1-202ENST00000473460 GMPR2Q9P2T1 348 aaKnown RBP9.32□□□□□ -0.92
GINS1-202ENST00000473460 PCDHGC3Q9UN70 934 aa9.32□□□□□ -0.92
GINS1-202ENST00000473460 NUTM1Q86Y26 1132 aa9.31□□□□□ -0.92
GINS1-202ENST00000473460 SSTR3P32745 418 aaPredicted RBP9.3□□□□□ -0.92
GINS1-202ENST00000473460 BARGINQ6ZT62 677 aa9.3□□□□□ -0.92
GINS1-202ENST00000473460 RETREG3Q86VR2 466 aa9.3□□□□□ -0.92
GINS1-202ENST00000473460 ZMYND10O75800 440 aa9.29□□□□□ -0.92
GINS1-202ENST00000473460 RC3H1Q5TC82 1133 aaKnown RBP9.29□□□□□ -0.92
GINS1-202ENST00000473460 SPIRE2Q8WWL2 714 aa9.29□□□□□ -0.92
GINS1-202ENST00000473460 FDX1P10109 184 aa9.28□□□□□ -0.92
GINS1-202ENST00000473460 WNT7BP56706 349 aa9.28□□□□□ -0.92
GINS1-202ENST00000473460 PTCRAQ6ISU1 281 aaPredicted RBP9.28□□□□□ -0.92
GINS1-202ENST00000473460 KRI1Q8N9T8 703 aaKnown RBP9.28□□□□□ -0.92
GINS1-202ENST00000473460 AMHR2Q16671 573 aa9.27□□□□□ -0.93
GINS1-202ENST00000473460 NDUFV2P19404 249 aa9.26□□□□□ -0.93
GINS1-202ENST00000473460 TREML4Q6UXN2 200 aa9.26□□□□□ -0.93
GINS1-202ENST00000473460 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
GINS1-202ENST00000473460 HPS1Q92902 700 aa9.26□□□□□ -0.93
GINS1-202ENST00000473460 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
GINS1-202ENST00000473460 MOXD2PA6NHM9 499 aa9.25□□□□□ -0.93
GINS1-202ENST00000473460 C11orf95C9JLR9 678 aaPredicted RBP9.25□□□□□ -0.93
GINS1-202ENST00000473460 ATP13A2Q9NQ11 1180 aa9.25□□□□□ -0.93
GINS1-202ENST00000473460 C6orf229H3BNL8 230 aa9.24□□□□□ -0.93
GINS1-202ENST00000473460 SIAH2O43255 324 aa9.23□□□□□ -0.93
GINS1-202ENST00000473460 TTLL12Q14166 644 aaPredicted RBP9.23□□□□□ -0.93
GINS1-202ENST00000473460 GIGYF2Q6Y7W6 1299 aaKnown RBP9.23□□□□□ -0.93
GINS1-202ENST00000473460 CCNYL3P0C7X3 344 aa9.21□□□□□ -0.94
GINS1-202ENST00000473460 MS4A1P11836 297 aa9.21□□□□□ -0.94
GINS1-202ENST00000473460 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
GINS1-202ENST00000473460 SH3BP2P78314 561 aa9.2□□□□□ -0.94
GINS1-202ENST00000473460 PTPRNQ16849 979 aa9.2□□□□□ -0.94
GINS1-202ENST00000473460 ALDH1A1P00352 501 aa9.19□□□□□ -0.94
GINS1-202ENST00000473460 NFX1Q12986 1120 aaKnown RBP9.19□□□□□ -0.94
GINS1-202ENST00000473460 PRR7Q8TB68 274 aa9.19□□□□□ -0.94
GINS1-202ENST00000473460 BEGAINQ9BUH8 593 aa9.19□□□□□ -0.94
GINS1-202ENST00000473460 EVA1BQ9NVM1 165 aa9.19□□□□□ -0.94
GINS1-202ENST00000473460 MTMR2Q13614 643 aa9.18□□□□□ -0.94
GINS1-202ENST00000473460 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
GINS1-202ENST00000473460 TRIM47Q96LD4 638 aa9.18□□□□□ -0.94
GINS1-202ENST00000473460 UNC93B1Q9H1C4 597 aa9.18□□□□□ -0.94
GINS1-202ENST00000473460 WFS1O76024 890 aa9.17□□□□□ -0.94
GINS1-202ENST00000473460 LCE2CQ5TA81 110 aa9.17□□□□□ -0.94
GINS1-202ENST00000473460 EHBP1Q8NDI1 1231 aa9.17□□□□□ -0.94
GINS1-202ENST00000473460 TRIM66O15016 1216 aa9.16□□□□□ -0.94
GINS1-202ENST00000473460 KCNH2Q12809 1159 aa9.16□□□□□ -0.94
GINS1-202ENST00000473460 TBC1D2Q9BYX2 928 aa9.16□□□□□ -0.94
GINS1-202ENST00000473460 LINC01559Q495D7 138 aa9.15□□□□□ -0.94
GINS1-202ENST00000473460 DESI1Q6ICB0 168 aa9.15□□□□□ -0.94
GINS1-202ENST00000473460 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
GINS1-202ENST00000473460 SENP2Q9HC62 589 aa9.15□□□□□ -0.94
GINS1-202ENST00000473460 PCDHB15Q9Y5E8 787 aa9.15□□□□□ -0.94
GINS1-202ENST00000473460 SPDYE5A6NIY4 337 aa9.14□□□□□ -0.95
GINS1-202ENST00000473460 GJA5P36382 358 aa9.14□□□□□ -0.95
GINS1-202ENST00000473460 BAP1Q92560 729 aa9.14□□□□□ -0.95
GINS1-202ENST00000473460 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
GINS1-202ENST00000473460 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
GINS1-202ENST00000473460 ZNF511Q8NB15 262 aa9.12□□□□□ -0.95
GINS1-202ENST00000473460 TLL2Q9Y6L7 1015 aa9.12□□□□□ -0.95
GINS1-202ENST00000473460 SPTLC1O15269 473 aa9.11□□□□□ -0.95
GINS1-202ENST00000473460 KIFC2Q96AC6 838 aa9.11□□□□□ -0.95
GINS1-202ENST00000473460 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
GINS1-202ENST00000473460 BMP1P13497 986 aa9.1□□□□□ -0.95
GINS1-202ENST00000473460 HRCP23327 699 aa9.1□□□□□ -0.95
GINS1-202ENST00000473460 LYPD8Q6UX82 237 aa9.1□□□□□ -0.95
GINS1-202ENST00000473460 WASF2Q9Y6W5 498 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms