RNA–Protein interactions for RNA: ENST00000473381.1

UBASH3A-204, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 2

Gene UBASH3A, Length 2,754 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-204ENST00000473381 DIP2CQ9Y2E4 1556 aa17.15■□□□□ 0.34
UBASH3A-204ENST00000473381 PIK3C2BO00750 1634 aa17.15■□□□□ 0.34
UBASH3A-204ENST00000473381 VGFO15240 615 aaPredicted RBP17.14■□□□□ 0.33
UBASH3A-204ENST00000473381 BCAR3O75815 825 aa17.14■□□□□ 0.33
UBASH3A-204ENST00000473381 NBR1Q14596 966 aa17.14■□□□□ 0.33
UBASH3A-204ENST00000473381 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
UBASH3A-204ENST00000473381 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
UBASH3A-204ENST00000473381 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
UBASH3A-204ENST00000473381 EVC2Q86UK5 1308 aa17.12■□□□□ 0.33
UBASH3A-204ENST00000473381 CGNL1Q0VF96 1302 aa17.11■□□□□ 0.33
UBASH3A-204ENST00000473381 USP32Q8NFA0 1604 aa17.11■□□□□ 0.33
UBASH3A-204ENST00000473381 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
UBASH3A-204ENST00000473381 ARHGAP31Q2M1Z3 1444 aa17.1■□□□□ 0.33
UBASH3A-204ENST00000473381 IDI1Q13907 227 aa17.1■□□□□ 0.33
UBASH3A-204ENST00000473381 PUS7Q96PZ0 661 aaKnown RBP17.1■□□□□ 0.33
UBASH3A-204ENST00000473381 ARHGEF28Q8N1W1 1705 aaKnown RBP17.1■□□□□ 0.33
UBASH3A-204ENST00000473381 RUNDC1Q96C34 613 aa17.1■□□□□ 0.33
UBASH3A-204ENST00000473381 MTHFSP49914 203 aa17.09■□□□□ 0.33
UBASH3A-204ENST00000473381 NEUROD2Q15784 382 aa17.08■□□□□ 0.33
UBASH3A-204ENST00000473381 RRP7AQ9Y3A4 280 aaKnown RBP17.08■□□□□ 0.33
UBASH3A-204ENST00000473381 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.32
UBASH3A-204ENST00000473381 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
UBASH3A-204ENST00000473381 RICTORQ6R327 1708 aa17.08■□□□□ 0.32
UBASH3A-204ENST00000473381 CABP2Q9NPB3 220 aa17.07■□□□□ 0.32
UBASH3A-204ENST00000473381 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
UBASH3A-204ENST00000473381 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
UBASH3A-204ENST00000473381 TCP11L2Q8N4U5 519 aa17.07■□□□□ 0.32
UBASH3A-204ENST00000473381 CFAP53Q96M91 514 aa17.07■□□□□ 0.32
UBASH3A-204ENST00000473381 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
UBASH3A-204ENST00000473381 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
UBASH3A-204ENST00000473381 NSD2O96028 1365 aa17.05■□□□□ 0.32
UBASH3A-204ENST00000473381 ZFYVE9O95405 1425 aa17.05■□□□□ 0.32
UBASH3A-204ENST00000473381 STK26Q9P289 416 aa17.05■□□□□ 0.32
UBASH3A-204ENST00000473381 DEKP35659 375 aaKnown RBP17.04■□□□□ 0.32
UBASH3A-204ENST00000473381 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
UBASH3A-204ENST00000473381 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
UBASH3A-204ENST00000473381 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
UBASH3A-204ENST00000473381 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.32
UBASH3A-204ENST00000473381 FAM161AQ3B820 660 aa17.02■□□□□ 0.31
UBASH3A-204ENST00000473381 WDR63Q8IWG1 891 aa17.02■□□□□ 0.31
UBASH3A-204ENST00000473381 RGS3P49796 1198 aa17.01■□□□□ 0.31
UBASH3A-204ENST00000473381 PANK1Q8TE04 598 aa17.01■□□□□ 0.31
UBASH3A-204ENST00000473381 SRPK2P78362 688 aaKnown RBP17■□□□□ 0.31
UBASH3A-204ENST00000473381 C8orf34Q49A92 452 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 DDRGK1Q96HY6 314 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 PREX1Q8TCU6 1659 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 IGHDP01880 384 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
UBASH3A-204ENST00000473381 BCL11AQ9H165 835 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 COG6Q9Y2V7 657 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 A0A1W2PP64 1363 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 TMEM131LA2VDJ0 1609 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 MYO5BQ9ULV0 1848 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
UBASH3A-204ENST00000473381 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
UBASH3A-204ENST00000473381 CCDC27Q2M243 656 aa17■□□□□ 0.31
UBASH3A-204ENST00000473381 RTL5Q5HYW3 569 aaPredicted RBP17■□□□□ 0.31
UBASH3A-204ENST00000473381 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
UBASH3A-204ENST00000473381 ABCC11Q96J66 1382 aa16.99■□□□□ 0.31
UBASH3A-204ENST00000473381 PTPRMP28827 1452 aa16.98■□□□□ 0.31
UBASH3A-204ENST00000473381 CLUAP1Q96AJ1 413 aa16.98■□□□□ 0.31
UBASH3A-204ENST00000473381 LAS1LQ9Y4W2 734 aaKnown RBP16.98■□□□□ 0.31
UBASH3A-204ENST00000473381 MINK1Q8N4C8 1332 aaPredicted RBP16.97■□□□□ 0.31
UBASH3A-204ENST00000473381 FBXO31Q5XUX0 539 aaPredicted RBP16.97■□□□□ 0.31
UBASH3A-204ENST00000473381 PRAM1Q96QH2 718 aa16.97■□□□□ 0.31
UBASH3A-204ENST00000473381 GGNBP2Q9H3C7 697 aa16.96■□□□□ 0.31
UBASH3A-204ENST00000473381 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.31
UBASH3A-204ENST00000473381 NCBP3Q53F19 620 aaKnown RBP16.95■□□□□ 0.3
UBASH3A-204ENST00000473381 POGKQ9P215 609 aa16.95■□□□□ 0.3
UBASH3A-204ENST00000473381 ATAD2Q6PL18 1390 aa16.95■□□□□ 0.3
UBASH3A-204ENST00000473381 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
UBASH3A-204ENST00000473381 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
UBASH3A-204ENST00000473381 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
UBASH3A-204ENST00000473381 TERF2IPQ9NYB0 399 aa16.94■□□□□ 0.3
UBASH3A-204ENST00000473381 TNNQ9UQP3 1299 aa16.94■□□□□ 0.3
UBASH3A-204ENST00000473381 RLBP1P12271 317 aa16.93■□□□□ 0.3
UBASH3A-204ENST00000473381 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
UBASH3A-204ENST00000473381 CD163L1Q9NR16 1453 aa16.92■□□□□ 0.3
UBASH3A-204ENST00000473381 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
UBASH3A-204ENST00000473381 FYB1O15117 783 aa16.92■□□□□ 0.3
UBASH3A-204ENST00000473381 COL3A1P02461 1466 aaPredicted RBP16.91■□□□□ 0.3
UBASH3A-204ENST00000473381 ALKQ9UM73 1620 aa16.91■□□□□ 0.3
UBASH3A-204ENST00000473381 CLTCQ00610 1675 aaKnown RBP16.91■□□□□ 0.3
UBASH3A-204ENST00000473381 PLEKHF1Q96S99 279 aa16.91■□□□□ 0.3
UBASH3A-204ENST00000473381 PPM1GO15355 546 aaPredicted RBP16.9■□□□□ 0.3
UBASH3A-204ENST00000473381 NEFMP07197 916 aa16.9■□□□□ 0.3
UBASH3A-204ENST00000473381 STAG3Q9UJ98 1225 aa16.9■□□□□ 0.3
UBASH3A-204ENST00000473381 NLRP1Q9C000 1473 aa16.9■□□□□ 0.3
UBASH3A-204ENST00000473381 SLC4A3P48751 1232 aa16.89■□□□□ 0.3
UBASH3A-204ENST00000473381 CDK19Q9BWU1 502 aa16.89■□□□□ 0.3
UBASH3A-204ENST00000473381 MED14O60244 1454 aa16.89■□□□□ 0.29
UBASH3A-204ENST00000473381 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
UBASH3A-204ENST00000473381 AAMPQ13685 434 aa16.89■□□□□ 0.29
UBASH3A-204ENST00000473381 HDGFL2Q7Z4V5 671 aaPredicted RBP16.89■□□□□ 0.29
UBASH3A-204ENST00000473381 TMPOP42166 694 aaKnown RBP16.88■□□□□ 0.29
UBASH3A-204ENST00000473381 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
UBASH3A-204ENST00000473381 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
UBASH3A-204ENST00000473381 MAPK8IP3Q9UPT6 1336 aa16.88■□□□□ 0.29
UBASH3A-204ENST00000473381 TSR2Q969E8 191 aaKnown RBP16.88■□□□□ 0.29
UBASH3A-204ENST00000473381 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms