RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 FAM43AQ8N2R8 423 aa18.19■□□□□ 0.5
NHLRC3-204ENST00000473371 PDZRN3Q9UPQ7 1066 aa18.19■□□□□ 0.5
NHLRC3-204ENST00000473371 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
NHLRC3-204ENST00000473371 DEPDC5O75140 1603 aa18.19■□□□□ 0.5
NHLRC3-204ENST00000473371 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
NHLRC3-204ENST00000473371 RLBP1P12271 317 aa18.18■□□□□ 0.5
NHLRC3-204ENST00000473371 MYOM2P54296 1465 aa18.18■□□□□ 0.5
NHLRC3-204ENST00000473371 NSD3Q9BZ95 1437 aa18.18■□□□□ 0.5
NHLRC3-204ENST00000473371 WDR63Q8IWG1 891 aa18.17■□□□□ 0.5
NHLRC3-204ENST00000473371 TBC1D32Q96NH3 1257 aa18.17■□□□□ 0.5
NHLRC3-204ENST00000473371 RWDD1Q9H446 243 aaPredicted RBP18.17■□□□□ 0.5
NHLRC3-204ENST00000473371 UGGT1Q9NYU2 1555 aa18.17■□□□□ 0.5
NHLRC3-204ENST00000473371 EIF5BO60841 1220 aaKnown RBP18.15■□□□□ 0.5
NHLRC3-204ENST00000473371 SHPRHQ149N8 1683 aa18.15■□□□□ 0.5
NHLRC3-204ENST00000473371 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
NHLRC3-204ENST00000473371 ANTXR1Q9H6X2 564 aa18.15■□□□□ 0.5
NHLRC3-204ENST00000473371 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
NHLRC3-204ENST00000473371 SBNO2Q9Y2G9 1366 aa18.14■□□□□ 0.49
NHLRC3-204ENST00000473371 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
NHLRC3-204ENST00000473371 ZMYM3Q14202 1370 aa18.14■□□□□ 0.49
NHLRC3-204ENST00000473371 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
NHLRC3-204ENST00000473371 VWDEQ8N2E2 1590 aa18.13■□□□□ 0.49
NHLRC3-204ENST00000473371 KIF1BO60333 1816 aa18.13■□□□□ 0.49
NHLRC3-204ENST00000473371 CFAP53Q96M91 514 aa18.13■□□□□ 0.49
NHLRC3-204ENST00000473371 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
NHLRC3-204ENST00000473371 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
NHLRC3-204ENST00000473371 GLI2P10070 1586 aa18.12■□□□□ 0.49
NHLRC3-204ENST00000473371 ATP7AQ04656 1500 aa18.12■□□□□ 0.49
NHLRC3-204ENST00000473371 IQSEC2Q5JU85 1478 aa18.12■□□□□ 0.49
NHLRC3-204ENST00000473371 CHGAP10645 457 aaKnown RBP18.11■□□□□ 0.49
NHLRC3-204ENST00000473371 MTHFSP49914 203 aa18.11■□□□□ 0.49
NHLRC3-204ENST00000473371 MYH16Q9H6N6 1097 aa18.11■□□□□ 0.49
NHLRC3-204ENST00000473371 MYO3AQ8NEV4 1616 aa18.11■□□□□ 0.49
NHLRC3-204ENST00000473371 SPRYD3Q8NCJ5 442 aa18.1■□□□□ 0.49
NHLRC3-204ENST00000473371 CCDC27Q2M243 656 aa18.1■□□□□ 0.49
NHLRC3-204ENST00000473371 MVPQ14764 893 aaKnown RBP18.09■□□□□ 0.49
NHLRC3-204ENST00000473371 FTSJ3Q8IY81 847 aaKnown RBP18.09■□□□□ 0.49
NHLRC3-204ENST00000473371 RSPH6AQ9H0K4 717 aa18.09■□□□□ 0.49
NHLRC3-204ENST00000473371 ZKSCAN2Q63HK3 967 aa18.08■□□□□ 0.49
NHLRC3-204ENST00000473371 NOS1P29475 1434 aa18.08■□□□□ 0.49
NHLRC3-204ENST00000473371 IFT172Q9UG01 1749 aa18.08■□□□□ 0.48
NHLRC3-204ENST00000473371 INO80Q9ULG1 1556 aaPredicted RBP18.07■□□□□ 0.48
NHLRC3-204ENST00000473371 U2AF1L5P0DN76 240 aaPredicted RBP18.07■□□□□ 0.48
NHLRC3-204ENST00000473371 U2AF1Q01081 240 aaKnown RBP eCLIP18.07■□□□□ 0.48
NHLRC3-204ENST00000473371 ARXQ96QS3 562 aa18.07■□□□□ 0.48
NHLRC3-204ENST00000473371 MROH2AA6NES4 1674 aa18.07■□□□□ 0.48
NHLRC3-204ENST00000473371 ZNF518AQ6AHZ1 1483 aa18.06■□□□□ 0.48
NHLRC3-204ENST00000473371 NRXN1Q9ULB1 1477 aa18.06■□□□□ 0.48
NHLRC3-204ENST00000473371 DZIP1LQ8IYY4 767 aaKnown RBP18.06■□□□□ 0.48
NHLRC3-204ENST00000473371 MFAP1P55081 439 aaKnown RBP18.05■□□□□ 0.48
NHLRC3-204ENST00000473371 C22orf23Q9BZE7 217 aa18.05■□□□□ 0.48
NHLRC3-204ENST00000473371 FANCAO15360 1455 aa18.05■□□□□ 0.48
NHLRC3-204ENST00000473371 MROH1Q8NDA8 1641 aa18.04■□□□□ 0.48
NHLRC3-204ENST00000473371 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
NHLRC3-204ENST00000473371 EFCAB6Q5THR3 1501 aa18.04■□□□□ 0.48
NHLRC3-204ENST00000473371 MCM4P33991 863 aa18.04■□□□□ 0.48
NHLRC3-204ENST00000473371 TMEM132EQ6IEE7 984 aa18.04■□□□□ 0.48
NHLRC3-204ENST00000473371 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
NHLRC3-204ENST00000473371 QRICH2Q9H0J4 1663 aa18.03■□□□□ 0.48
NHLRC3-204ENST00000473371 GOLGA6L3A6NEY3 463 aa18.03■□□□□ 0.48
NHLRC3-204ENST00000473371 SMC4Q9NTJ3 1288 aa18.03■□□□□ 0.48
NHLRC3-204ENST00000473371 C14orf93Q9H972 538 aaKnown RBP18.02■□□□□ 0.48
NHLRC3-204ENST00000473371 CFAP74Q9C0B2 1584 aa18.02■□□□□ 0.48
NHLRC3-204ENST00000473371 PPRC1Q5VV67 1664 aaKnown RBP18.02■□□□□ 0.48
NHLRC3-204ENST00000473371 TSR2Q969E8 191 aaKnown RBP18.02■□□□□ 0.48
NHLRC3-204ENST00000473371 RRAGDQ9NQL2 400 aaPredicted RBP18.02■□□□□ 0.48
NHLRC3-204ENST00000473371 CHMP5Q9NZZ3 219 aa18.02■□□□□ 0.48
NHLRC3-204ENST00000473371 GZF1Q9H116 711 aaPredicted RBP18.02■□□□□ 0.47
NHLRC3-204ENST00000473371 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
NHLRC3-204ENST00000473371 ADGRL1O94910 1474 aa18.01■□□□□ 0.47
NHLRC3-204ENST00000473371 ZC3H13Q5T200 1668 aaKnown RBP18■□□□□ 0.47
NHLRC3-204ENST00000473371 CT47B1P0C2W7 299 aaPredicted RBP18■□□□□ 0.47
NHLRC3-204ENST00000473371 ITPRIPQ8IWB1 547 aa18■□□□□ 0.47
NHLRC3-204ENST00000473371 EXOSC9Q06265 439 aaKnown RBP18■□□□□ 0.47
NHLRC3-204ENST00000473371 USP32Q8NFA0 1604 aa17.99■□□□□ 0.47
NHLRC3-204ENST00000473371 XRCC6P12956 609 aaKnown RBP eCLIP17.99■□□□□ 0.47
NHLRC3-204ENST00000473371 ADGRB3O60242 1522 aa17.99■□□□□ 0.47
NHLRC3-204ENST00000473371 DDX19BQ9UMR2 479 aa17.98■□□□□ 0.47
NHLRC3-204ENST00000473371 HDAC1Q13547 482 aaPredicted RBP17.98■□□□□ 0.47
NHLRC3-204ENST00000473371 TRIM27P14373 513 aa17.98■□□□□ 0.47
NHLRC3-204ENST00000473371 HSCBQ8IWL3 235 aa17.98■□□□□ 0.47
NHLRC3-204ENST00000473371 U2SURPO15042 1029 aaKnown RBP17.97■□□□□ 0.47
NHLRC3-204ENST00000473371 KIF13AQ9H1H9 1805 aa17.97■□□□□ 0.47
NHLRC3-204ENST00000473371 EVC2Q86UK5 1308 aa17.97■□□□□ 0.47
NHLRC3-204ENST00000473371 FSD2A1L4K1 749 aa17.96■□□□□ 0.47
NHLRC3-204ENST00000473371 TRAK2O60296 914 aa17.96■□□□□ 0.47
NHLRC3-204ENST00000473371 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
NHLRC3-204ENST00000473371 NSD2O96028 1365 aa17.96■□□□□ 0.47
NHLRC3-204ENST00000473371 ATF7IPQ6VMQ6 1270 aa17.96■□□□□ 0.47
NHLRC3-204ENST00000473371 ADGRB1O14514 1584 aa17.95■□□□□ 0.46
NHLRC3-204ENST00000473371 ANKRD36BQ8N2N9 1353 aa17.95■□□□□ 0.46
NHLRC3-204ENST00000473371 ADGRB2O60241 1585 aa17.95■□□□□ 0.46
NHLRC3-204ENST00000473371 CFAP65Q6ZU64 1925 aaKnown RBP17.95■□□□□ 0.46
NHLRC3-204ENST00000473371 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
NHLRC3-204ENST00000473371 NOB1Q9ULX3 412 aaKnown RBP17.94■□□□□ 0.46
NHLRC3-204ENST00000473371 PPLO60437 1756 aa17.94■□□□□ 0.46
NHLRC3-204ENST00000473371 SMC5Q8IY18 1101 aa17.93■□□□□ 0.46
NHLRC3-204ENST00000473371 PANK2Q9BZ23 570 aa17.93■□□□□ 0.46
NHLRC3-204ENST00000473371 LMTK2Q8IWU2 1503 aa17.93■□□□□ 0.46
NHLRC3-204ENST00000473371 CABP2Q9NPB3 220 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms