RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 BRINP3Q76B58 766 aa10.56□□□□□ -0.72
CKS1B-205ENST00000473344 NUTM2AQ8IVF1 878 aaPredicted RBP10.56□□□□□ -0.72
CKS1B-205ENST00000473344 E9PCH4 1651 aa10.56□□□□□ -0.72
CKS1B-205ENST00000473344 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.55□□□□□ -0.72
CKS1B-205ENST00000473344 AHDC1Q5TGY3 1603 aaPredicted RBP10.55□□□□□ -0.72
CKS1B-205ENST00000473344 RXRBP28702 533 aa10.55□□□□□ -0.72
CKS1B-205ENST00000473344 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
CKS1B-205ENST00000473344 IQGAP3Q86VI3 1631 aa10.55□□□□□ -0.72
CKS1B-205ENST00000473344 DCCP43146 1447 aa10.54□□□□□ -0.72
CKS1B-205ENST00000473344 PTPRUQ92729 1446 aa10.53□□□□□ -0.72
CKS1B-205ENST00000473344 UPF1Q92900 1129 aaKnown RBP eCLIP10.53□□□□□ -0.72
CKS1B-205ENST00000473344 LRRC59Q96AG4 307 aaKnown RBP10.53□□□□□ -0.72
CKS1B-205ENST00000473344 SHPRHQ149N8 1683 aa10.53□□□□□ -0.72
CKS1B-205ENST00000473344 ASXL1Q8IXJ9 1541 aa10.51□□□□□ -0.73
CKS1B-205ENST00000473344 AFF2P51816 1311 aa10.51□□□□□ -0.73
CKS1B-205ENST00000473344 CLCN6P51797 869 aa10.5□□□□□ -0.73
CKS1B-205ENST00000473344 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
CKS1B-205ENST00000473344 C8orf37Q96NL8 207 aa10.5□□□□□ -0.73
CKS1B-205ENST00000473344 SETBP1Q9Y6X0 1596 aa10.5□□□□□ -0.73
CKS1B-205ENST00000473344 METP08581 1390 aa10.5□□□□□ -0.73
CKS1B-205ENST00000473344 SRCAPQ6ZRS2 3230 aa10.5□□□□□ -0.73
CKS1B-205ENST00000473344 MST1RQ04912 1400 aa10.5□□□□□ -0.73
CKS1B-205ENST00000473344 SETD5Q9C0A6 1442 aa10.5□□□□□ -0.73
CKS1B-205ENST00000473344 GABBR2O75899 941 aa10.48□□□□□ -0.73
CKS1B-205ENST00000473344 PPARGC1BQ86YN6 1023 aaKnown RBP10.48□□□□□ -0.73
CKS1B-205ENST00000473344 CDK12Q9NYV4 1490 aaPredicted RBP10.48□□□□□ -0.73
CKS1B-205ENST00000473344 XRN1Q8IZH2 1706 aaKnown RBP10.47□□□□□ -0.73
CKS1B-205ENST00000473344 DDX17Q92841 729 aaKnown RBP10.47□□□□□ -0.73
CKS1B-205ENST00000473344 NGLY1Q96IV0 654 aa10.47□□□□□ -0.73
CKS1B-205ENST00000473344 QTRT2Q9H974 415 aaKnown RBP10.47□□□□□ -0.73
CKS1B-205ENST00000473344 ADGRL3Q9HAR2 1447 aa10.47□□□□□ -0.73
CKS1B-205ENST00000473344 NRXN3Q9Y4C0 1643 aa10.47□□□□□ -0.73
CKS1B-205ENST00000473344 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
CKS1B-205ENST00000473344 VGFO15240 615 aaPredicted RBP10.46□□□□□ -0.73
CKS1B-205ENST00000473344 ADAMTS2O95450 1211 aa10.46□□□□□ -0.73
CKS1B-205ENST00000473344 RBM6P78332 1123 aaKnown RBP10.46□□□□□ -0.73
CKS1B-205ENST00000473344 NHSL1Q5SYE7 1610 aa10.45□□□□□ -0.74
CKS1B-205ENST00000473344 PNPLA6Q8IY17 1366 aa10.45□□□□□ -0.74
CKS1B-205ENST00000473344 NEXMIFQ5QGS0 1516 aa10.44□□□□□ -0.74
CKS1B-205ENST00000473344 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
CKS1B-205ENST00000473344 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
CKS1B-205ENST00000473344 CLTCL1P53675 1640 aa10.43□□□□□ -0.74
CKS1B-205ENST00000473344 RGS12O14924 1447 aa10.42□□□□□ -0.74
CKS1B-205ENST00000473344 NALCNQ8IZF0 1738 aa10.42□□□□□ -0.74
CKS1B-205ENST00000473344 ORAI2Q96SN7 254 aa10.42□□□□□ -0.74
CKS1B-205ENST00000473344 USP21Q9UK80 565 aa10.42□□□□□ -0.74
CKS1B-205ENST00000473344 PTCH1Q13635 1447 aa10.41□□□□□ -0.74
CKS1B-205ENST00000473344 TRPC5Q9UL62 973 aaPredicted RBP10.41□□□□□ -0.74
CKS1B-205ENST00000473344 ATAD2Q6PL18 1390 aa10.4□□□□□ -0.74
CKS1B-205ENST00000473344 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
CKS1B-205ENST00000473344 SOS2Q07890 1332 aaPredicted RBP10.4□□□□□ -0.74
CKS1B-205ENST00000473344 RPGRIP1LQ68CZ1 1315 aa10.4□□□□□ -0.74
CKS1B-205ENST00000473344 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
CKS1B-205ENST00000473344 ESCO1Q5FWF5 840 aa10.4□□□□□ -0.74
CKS1B-205ENST00000473344 EP400Q96L91 3159 aa10.39□□□□□ -0.75
CKS1B-205ENST00000473344 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
CKS1B-205ENST00000473344 KIF1BO60333 1816 aa10.39□□□□□ -0.75
CKS1B-205ENST00000473344 HFM1A2PYH4 1435 aa10.39□□□□□ -0.75
CKS1B-205ENST00000473344 NAIPQ13075 1403 aa10.39□□□□□ -0.75
CKS1B-205ENST00000473344 NPHP3Q7Z494 1330 aa10.38□□□□□ -0.75
CKS1B-205ENST00000473344 FNBP4Q8N3X1 1017 aaPredicted RBP10.38□□□□□ -0.75
CKS1B-205ENST00000473344 LRPPRCP42704 1394 aaKnown RBP10.37□□□□□ -0.75
CKS1B-205ENST00000473344 RRBP1Q9P2E9 1410 aaKnown RBP10.36□□□□□ -0.75
CKS1B-205ENST00000473344 FOXO3O43524 673 aa10.36□□□□□ -0.75
CKS1B-205ENST00000473344 LAMC1P11047 1609 aa10.36□□□□□ -0.75
CKS1B-205ENST00000473344 PRAG1Q86YV5 1406 aa10.35□□□□□ -0.75
CKS1B-205ENST00000473344 NUTM2FA1L443 756 aa10.35□□□□□ -0.75
CKS1B-205ENST00000473344 STK26Q9P289 416 aa10.35□□□□□ -0.75
CKS1B-205ENST00000473344 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
CKS1B-205ENST00000473344 XPCQ01831 940 aaPredicted RBP10.34□□□□□ -0.75
CKS1B-205ENST00000473344 RGL3Q3MIN7 710 aa10.34□□□□□ -0.75
CKS1B-205ENST00000473344 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
CKS1B-205ENST00000473344 ATRNO75882 1429 aa10.33□□□□□ -0.76
CKS1B-205ENST00000473344 CCDC125Q86Z20 511 aa10.33□□□□□ -0.76
CKS1B-205ENST00000473344 CDC42BPGQ6DT37 1551 aa10.33□□□□□ -0.76
CKS1B-205ENST00000473344 COL22A1Q8NFW1 1626 aaPredicted RBP10.33□□□□□ -0.76
CKS1B-205ENST00000473344 MYOM2P54296 1465 aa10.32□□□□□ -0.76
CKS1B-205ENST00000473344 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
CKS1B-205ENST00000473344 WAPLQ7Z5K2 1190 aa10.32□□□□□ -0.76
CKS1B-205ENST00000473344 GJD4Q96KN9 370 aaPredicted RBP10.32□□□□□ -0.76
CKS1B-205ENST00000473344 ADGRF5Q8IZF2 1346 aa10.32□□□□□ -0.76
CKS1B-205ENST00000473344 PXDNQ92626 1479 aa10.31□□□□□ -0.76
CKS1B-205ENST00000473344 LHX8Q68G74 356 aa10.31□□□□□ -0.76
CKS1B-205ENST00000473344 BCL9LQ86UU0 1499 aa10.3□□□□□ -0.76
CKS1B-205ENST00000473344 ANKRD30BQ9BXX2 1392 aa10.3□□□□□ -0.76
CKS1B-205ENST00000473344 PPLO60437 1756 aa10.3□□□□□ -0.76
CKS1B-205ENST00000473344 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
CKS1B-205ENST00000473344 TMEM132EQ6IEE7 984 aa10.3□□□□□ -0.76
CKS1B-205ENST00000473344 UNC5CLQ8IV45 518 aa10.29□□□□□ -0.76
CKS1B-205ENST00000473344 ABCC11Q96J66 1382 aa10.28□□□□□ -0.76
CKS1B-205ENST00000473344 TECPR2O15040 1411 aa10.28□□□□□ -0.76
CKS1B-205ENST00000473344 PSME1Q06323 249 aa10.28□□□□□ -0.76
CKS1B-205ENST00000473344 SF3B2Q13435 895 aaKnown RBP10.28□□□□□ -0.76
CKS1B-205ENST00000473344 KRT28Q7Z3Y7 464 aa10.28□□□□□ -0.76
CKS1B-205ENST00000473344 MPHOSPH9Q99550 1183 aa10.28□□□□□ -0.76
CKS1B-205ENST00000473344 SPATA31A3Q5VYP0 1347 aa10.28□□□□□ -0.76
CKS1B-205ENST00000473344 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
CKS1B-205ENST00000473344 MYT1Q01538 1121 aa10.27□□□□□ -0.77
CKS1B-205ENST00000473344 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
CKS1B-205ENST00000473344 CCDC9Q9Y3X0 531 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms