RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 RAD54L2Q9Y4B4 1467 aa6.27□□□□□ -1.41
XRN1-209ENST00000472625 CUX1P39880 1505 aa6.25□□□□□ -1.41
XRN1-209ENST00000472625 ABCA10Q8WWZ4 1543 aa6.25□□□□□ -1.41
XRN1-209ENST00000472625 GAPVD1Q14C86 1478 aa6.25□□□□□ -1.41
XRN1-209ENST00000472625 ZPR1O75312 459 aa6.24□□□□□ -1.41
XRN1-209ENST00000472625 PRKD2Q9BZL6 878 aa6.24□□□□□ -1.41
XRN1-209ENST00000472625 WRNQ14191 1432 aaPredicted RBP eCLIP6.24□□□□□ -1.41
XRN1-209ENST00000472625 TULP1O00294 542 aaPredicted RBP6.23□□□□□ -1.41
XRN1-209ENST00000472625 PUS10Q3MIT2 529 aaKnown RBP6.23□□□□□ -1.41
XRN1-209ENST00000472625 NECTIN2Q92692 538 aa6.23□□□□□ -1.41
XRN1-209ENST00000472625 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.23□□□□□ -1.41
XRN1-209ENST00000472625 ABCA5Q8WWZ7 1642 aa6.22□□□□□ -1.41
XRN1-209ENST00000472625 KMT5BQ4FZB7 885 aa6.22□□□□□ -1.41
XRN1-209ENST00000472625 DAXXQ9UER7 740 aaPredicted RBP6.22□□□□□ -1.41
XRN1-209ENST00000472625 PBRM1Q86U86 1689 aa6.21□□□□□ -1.42
XRN1-209ENST00000472625 PPEF1O14829 653 aaPredicted RBP6.21□□□□□ -1.42
XRN1-209ENST00000472625 TRIM66O15016 1216 aa6.21□□□□□ -1.42
XRN1-209ENST00000472625 ACTN4O43707 911 aaKnown RBP6.21□□□□□ -1.42
XRN1-209ENST00000472625 AMHR2Q16671 573 aa6.21□□□□□ -1.42
XRN1-209ENST00000472625 RDH13Q8NBN7 331 aa6.21□□□□□ -1.42
XRN1-209ENST00000472625 SLC24A3Q9HC58 644 aa6.21□□□□□ -1.42
XRN1-209ENST00000472625 GRIN2AQ12879 1464 aa6.21□□□□□ -1.42
XRN1-209ENST00000472625 DDX11L8A8MPP1 907 aa6.2□□□□□ -1.42
XRN1-209ENST00000472625 PRR14Q9BWN1 585 aa6.2□□□□□ -1.42
XRN1-209ENST00000472625 ERICH3Q5RHP9 1530 aa6.2□□□□□ -1.42
XRN1-209ENST00000472625 ADAMTS12P58397 1594 aa6.19□□□□□ -1.42
XRN1-209ENST00000472625 FHAD1B1AJZ9 1412 aa6.19□□□□□ -1.42
XRN1-209ENST00000472625 NUP160Q12769 1436 aa6.19□□□□□ -1.42
XRN1-209ENST00000472625 S1PR4O95977 384 aa6.19□□□□□ -1.42
XRN1-209ENST00000472625 CD46P15529 392 aa6.19□□□□□ -1.42
XRN1-209ENST00000472625 MDM2Q00987 491 aaPredicted RBP6.19□□□□□ -1.42
XRN1-209ENST00000472625 Q6ZNB5 142 aa6.19□□□□□ -1.42
XRN1-209ENST00000472625 FAM217BQ9NTX9 383 aaPredicted RBP6.19□□□□□ -1.42
XRN1-209ENST00000472625 RNF223E7ERA6 249 aa6.18□□□□□ -1.42
XRN1-209ENST00000472625 PARP9Q8IXQ6 854 aa6.18□□□□□ -1.42
XRN1-209ENST00000472625 EMID1Q96A84 441 aaPredicted RBP6.18□□□□□ -1.42
XRN1-209ENST00000472625 TOP2BQ02880 1626 aa6.17□□□□□ -1.42
XRN1-209ENST00000472625 GFRA3O60609 400 aa6.17□□□□□ -1.42
XRN1-209ENST00000472625 GCGRP47871 477 aa6.17□□□□□ -1.42
XRN1-209ENST00000472625 LCE2BO14633 110 aa6.16□□□□□ -1.42
XRN1-209ENST00000472625 MS4A1P11836 297 aa6.16□□□□□ -1.42
XRN1-209ENST00000472625 GGCXP38435 758 aa6.16□□□□□ -1.42
XRN1-209ENST00000472625 FUT2Q10981 343 aa6.16□□□□□ -1.42
XRN1-209ENST00000472625 GPCPD1Q9NPB8 672 aa6.16□□□□□ -1.42
XRN1-209ENST00000472625 BIVM-ERCC5R4GMW8 1640 aa6.16□□□□□ -1.42
XRN1-209ENST00000472625 CEP170Q5SW79 1584 aa6.15□□□□□ -1.42
XRN1-209ENST00000472625 SHROOM2Q13796 1616 aa6.15□□□□□ -1.42
XRN1-209ENST00000472625 NR1I2O75469 434 aa6.15□□□□□ -1.42
XRN1-209ENST00000472625 ADH1BP00325 375 aa6.15□□□□□ -1.42
XRN1-209ENST00000472625 AK7Q96M32 723 aa6.15□□□□□ -1.42
XRN1-209ENST00000472625 PLA2G2CQ5R387 149 aa6.14□□□□□ -1.43
XRN1-209ENST00000472625 GIGYF2Q6Y7W6 1299 aaKnown RBP6.14□□□□□ -1.43
XRN1-209ENST00000472625 SCUBE3Q8IX30 993 aa6.14□□□□□ -1.43
XRN1-209ENST00000472625 KRI1Q8N9T8 703 aaKnown RBP6.14□□□□□ -1.43
XRN1-209ENST00000472625 HLA-CQ95604 372 aa6.14□□□□□ -1.43
XRN1-209ENST00000472625 V9GY48 417 aaPredicted RBP6.14□□□□□ -1.43
XRN1-209ENST00000472625 SUPT5HO00267 1087 aaKnown RBP6.13□□□□□ -1.43
XRN1-209ENST00000472625 CLCN1P35523 988 aa6.13□□□□□ -1.43
XRN1-209ENST00000472625 PDE4DQ08499 809 aa6.13□□□□□ -1.43
XRN1-209ENST00000472625 MORN1Q5T089 497 aa6.13□□□□□ -1.43
XRN1-209ENST00000472625 RSPH4AQ5TD94 716 aa6.13□□□□□ -1.43
XRN1-209ENST00000472625 THAP11Q96EK4 314 aa6.13□□□□□ -1.43
XRN1-209ENST00000472625 SLC6A16Q9GZN6 736 aa6.13□□□□□ -1.43
XRN1-209ENST00000472625 PRDM9Q9NQV7 894 aa6.13□□□□□ -1.43
XRN1-209ENST00000472625 SSTR3P32745 418 aaPredicted RBP6.12□□□□□ -1.43
XRN1-209ENST00000472625 SLC19A1P41440 591 aa6.12□□□□□ -1.43
XRN1-209ENST00000472625 LIAT1Q6ZQX7 453 aa6.12□□□□□ -1.43
XRN1-209ENST00000472625 PRG4Q92954 1404 aaPredicted RBP6.12□□□□□ -1.43
XRN1-209ENST00000472625 SPSB2Q99619 263 aa6.12□□□□□ -1.43
XRN1-209ENST00000472625 PDZRN3Q9UPQ7 1066 aa6.12□□□□□ -1.43
XRN1-209ENST00000472625 SLC27A5Q9Y2P5 690 aa6.12□□□□□ -1.43
XRN1-209ENST00000472625 MAPKBP1O60336 1514 aa6.11□□□□□ -1.43
XRN1-209ENST00000472625 RUSC2Q8N2Y8 1516 aa6.11□□□□□ -1.43
XRN1-209ENST00000472625 RNF19BQ6ZMZ0 732 aa6.11□□□□□ -1.43
XRN1-209ENST00000472625 TRIM67Q6ZTA4 783 aa6.11□□□□□ -1.43
XRN1-209ENST00000472625 SULF1Q8IWU6 871 aa6.11□□□□□ -1.43
XRN1-209ENST00000472625 ANKLE1Q8NAG6 615 aa6.11□□□□□ -1.43
XRN1-209ENST00000472625 KIF27Q86VH2 1401 aa6.1□□□□□ -1.43
XRN1-209ENST00000472625 NRG2O14511 850 aaPredicted RBP6.1□□□□□ -1.43
XRN1-209ENST00000472625 ATP6V1AP38606 617 aa6.1□□□□□ -1.43
XRN1-209ENST00000472625 CUL7Q14999 1698 aa6.1□□□□□ -1.43
XRN1-209ENST00000472625 TNFRSF10AO00220 468 aa6.09□□□□□ -1.43
XRN1-209ENST00000472625 PRKCSHP14314 528 aaPredicted RBP6.09□□□□□ -1.43
XRN1-209ENST00000472625 GUCA2AQ02747 115 aa6.09□□□□□ -1.43
XRN1-209ENST00000472625 FAM160A2Q8N612 972 aaPredicted RBP6.09□□□□□ -1.43
XRN1-209ENST00000472625 ABCC10Q5T3U5 1492 aa6.09□□□□□ -1.44
XRN1-209ENST00000472625 HOXA2O43364 376 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 LAPTM4AQ15012 233 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 TPRNQ4KMQ1 711 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 ZNF697Q5TEC3 545 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 SPRYD7Q5W111 196 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 SPIRE2Q8WWL2 714 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 GPBP1L1Q9HC44 474 aaPredicted RBP6.08□□□□□ -1.44
XRN1-209ENST00000472625 PCDHGC3Q9UN70 934 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 FCF1Q9Y324 198 aaKnown RBP6.08□□□□□ -1.44
XRN1-209ENST00000472625 ERCC6L2Q5T890 1561 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 KIAA0586Q9BVV6 1533 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 CARMIL2Q6F5E8 1435 aa6.08□□□□□ -1.44
XRN1-209ENST00000472625 KDM4AO75164 1064 aa6.07□□□□□ -1.44
XRN1-209ENST00000472625 FMNL1O95466 1100 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms