RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
CLRN1-205ENST00000472224 HRCP23327 699 aa17.45■□□□□ 0.38
CLRN1-205ENST00000472224 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
CLRN1-205ENST00000472224 NALCNQ8IZF0 1738 aa17.44■□□□□ 0.38
CLRN1-205ENST00000472224 LRRC59Q96AG4 307 aaKnown RBP17.44■□□□□ 0.38
CLRN1-205ENST00000472224 AMOTL2Q9Y2J4 779 aa17.44■□□□□ 0.38
CLRN1-205ENST00000472224 IFT172Q9UG01 1749 aa17.44■□□□□ 0.38
CLRN1-205ENST00000472224 LAMC1P11047 1609 aa17.43■□□□□ 0.38
CLRN1-205ENST00000472224 RGL3Q3MIN7 710 aa17.43■□□□□ 0.38
CLRN1-205ENST00000472224 ADAMTS2O95450 1211 aa17.41■□□□□ 0.38
CLRN1-205ENST00000472224 TRIM26Q12899 539 aaPredicted RBP17.41■□□□□ 0.38
CLRN1-205ENST00000472224 NGLY1Q96IV0 654 aa17.41■□□□□ 0.38
CLRN1-205ENST00000472224 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
CLRN1-205ENST00000472224 ANKRD30BQ9BXX2 1392 aa17.4■□□□□ 0.38
CLRN1-205ENST00000472224 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.37
CLRN1-205ENST00000472224 ATRNO75882 1429 aa17.38■□□□□ 0.37
CLRN1-205ENST00000472224 LRP5O75197 1615 aa17.37■□□□□ 0.37
CLRN1-205ENST00000472224 COL22A1Q8NFW1 1626 aaPredicted RBP17.37■□□□□ 0.37
CLRN1-205ENST00000472224 VGFO15240 615 aaPredicted RBP17.37■□□□□ 0.37
CLRN1-205ENST00000472224 ADGRL3Q9HAR2 1447 aa17.37■□□□□ 0.37
CLRN1-205ENST00000472224 USP21Q9UK80 565 aa17.36■□□□□ 0.37
CLRN1-205ENST00000472224 MARF1Q9Y4F3 1742 aaKnown RBP17.35■□□□□ 0.37
CLRN1-205ENST00000472224 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
CLRN1-205ENST00000472224 FNBP4Q8N3X1 1017 aaPredicted RBP17.34■□□□□ 0.37
CLRN1-205ENST00000472224 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.37
CLRN1-205ENST00000472224 PTCH1Q13635 1447 aa17.33■□□□□ 0.36
CLRN1-205ENST00000472224 METP08581 1390 aa17.33■□□□□ 0.36
CLRN1-205ENST00000472224 ADGRF5Q8IZF2 1346 aa17.33■□□□□ 0.36
CLRN1-205ENST00000472224 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
CLRN1-205ENST00000472224 CCDC125Q86Z20 511 aa17.31■□□□□ 0.36
CLRN1-205ENST00000472224 SOS2Q07890 1332 aaPredicted RBP17.3■□□□□ 0.36
CLRN1-205ENST00000472224 BRWD3Q6RI45 1802 aa17.3■□□□□ 0.36
CLRN1-205ENST00000472224 MYOM2P54296 1465 aa17.3■□□□□ 0.36
CLRN1-205ENST00000472224 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.28■□□□□ 0.36
CLRN1-205ENST00000472224 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
CLRN1-205ENST00000472224 GLI3P10071 1580 aa17.27■□□□□ 0.35
CLRN1-205ENST00000472224 KDM2AQ9Y2K7 1162 aa17.26■□□□□ 0.35
CLRN1-205ENST00000472224 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
CLRN1-205ENST00000472224 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
CLRN1-205ENST00000472224 DHX57Q6P158 1386 aaKnown RBP17.25■□□□□ 0.35
CLRN1-205ENST00000472224 DCAF11Q8TEB1 546 aa17.24■□□□□ 0.35
CLRN1-205ENST00000472224 NRXN1Q9ULB1 1477 aa17.24■□□□□ 0.35
CLRN1-205ENST00000472224 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
CLRN1-205ENST00000472224 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
CLRN1-205ENST00000472224 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
CLRN1-205ENST00000472224 PXDNQ92626 1479 aa17.21■□□□□ 0.35
CLRN1-205ENST00000472224 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
CLRN1-205ENST00000472224 STK26Q9P289 416 aa17.21■□□□□ 0.35
CLRN1-205ENST00000472224 TMEM132EQ6IEE7 984 aa17.2■□□□□ 0.34
CLRN1-205ENST00000472224 PCGF6Q9BYE7 350 aa17.2■□□□□ 0.34
CLRN1-205ENST00000472224 ROBO2Q9HCK4 1378 aa17.19■□□□□ 0.34
CLRN1-205ENST00000472224 NEUROD1Q13562 356 aa17.19■□□□□ 0.34
CLRN1-205ENST00000472224 CFAP70Q5T0N1 1121 aa17.19■□□□□ 0.34
CLRN1-205ENST00000472224 SIN3AQ96ST3 1273 aa17.18■□□□□ 0.34
CLRN1-205ENST00000472224 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
CLRN1-205ENST00000472224 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
CLRN1-205ENST00000472224 YTHDC2Q9H6S0 1430 aaKnown RBP17.17■□□□□ 0.34
CLRN1-205ENST00000472224 SLIT2O94813 1529 aa17.16■□□□□ 0.34
CLRN1-205ENST00000472224 PRAG1Q86YV5 1406 aa17.16■□□□□ 0.34
CLRN1-205ENST00000472224 C14orf93Q9H972 538 aaKnown RBP17.16■□□□□ 0.34
CLRN1-205ENST00000472224 TECPR2O15040 1411 aa17.14■□□□□ 0.33
CLRN1-205ENST00000472224 PSDA5PKW4 1024 aaPredicted RBP17.13■□□□□ 0.33
CLRN1-205ENST00000472224 ADGRB1O14514 1584 aa17.13■□□□□ 0.33
CLRN1-205ENST00000472224 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
CLRN1-205ENST00000472224 USP32Q8NFA0 1604 aa17.13■□□□□ 0.33
CLRN1-205ENST00000472224 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
CLRN1-205ENST00000472224 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
CLRN1-205ENST00000472224 KIAA1210Q9ULL0 1709 aa17.12■□□□□ 0.33
CLRN1-205ENST00000472224 ABCC11Q96J66 1382 aa17.12■□□□□ 0.33
CLRN1-205ENST00000472224 PLCH1Q4KWH8 1693 aa17.11■□□□□ 0.33
CLRN1-205ENST00000472224 XPCQ01831 940 aaPredicted RBP17.11■□□□□ 0.33
CLRN1-205ENST00000472224 UNC5CLQ8IV45 518 aa17.11■□□□□ 0.33
CLRN1-205ENST00000472224 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
CLRN1-205ENST00000472224 L3MBTL2Q969R5 705 aa17.1■□□□□ 0.33
CLRN1-205ENST00000472224 NPHP3Q7Z494 1330 aa17.1■□□□□ 0.33
CLRN1-205ENST00000472224 ARHGEF28Q8N1W1 1705 aaKnown RBP17.09■□□□□ 0.33
CLRN1-205ENST00000472224 DLC1Q96QB1 1528 aa17.08■□□□□ 0.32
CLRN1-205ENST00000472224 SF3B2Q13435 895 aaKnown RBP17.08■□□□□ 0.32
CLRN1-205ENST00000472224 SAFB2Q14151 953 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLRN1-205ENST00000472224 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
CLRN1-205ENST00000472224 TRAK1Q9UPV9 953 aa17.08■□□□□ 0.32
CLRN1-205ENST00000472224 ABCA3Q99758 1704 aa17.07■□□□□ 0.32
CLRN1-205ENST00000472224 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
CLRN1-205ENST00000472224 TONSLQ96HA7 1378 aa17.07■□□□□ 0.32
CLRN1-205ENST00000472224 ESCO1Q5FWF5 840 aa17.07■□□□□ 0.32
CLRN1-205ENST00000472224 FOXO3O43524 673 aa17.06■□□□□ 0.32
CLRN1-205ENST00000472224 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
CLRN1-205ENST00000472224 POGKQ9P215 609 aa17.06■□□□□ 0.32
CLRN1-205ENST00000472224 FMN2Q9NZ56 1722 aa17.05■□□□□ 0.32
CLRN1-205ENST00000472224 TRPM1Q7Z4N2 1603 aa17.05■□□□□ 0.32
CLRN1-205ENST00000472224 RGPD1P0DJD0 1748 aa17.04■□□□□ 0.32
CLRN1-205ENST00000472224 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
CLRN1-205ENST00000472224 NUTM2FA1L443 756 aa17.03■□□□□ 0.32
CLRN1-205ENST00000472224 ONECUT3O60422 494 aaPredicted RBP17.03■□□□□ 0.32
CLRN1-205ENST00000472224 RGPD8O14715 1765 aaPredicted RBP17.02■□□□□ 0.32
CLRN1-205ENST00000472224 KIF1AQ12756 1690 aa17.02■□□□□ 0.32
CLRN1-205ENST00000472224 KRT27Q7Z3Y8 459 aa17.02■□□□□ 0.32
CLRN1-205ENST00000472224 NRAPQ86VF7 1730 aa17.01■□□□□ 0.31
CLRN1-205ENST00000472224 SPATA31A3Q5VYP0 1347 aa17.01■□□□□ 0.31
CLRN1-205ENST00000472224 VPS72Q15906 364 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms